RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	CDR1	P51861	262 aa		18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	ST5	P78524	1137 aa		18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532		U3KPZ7	1027 aa	Predicted RBP	18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.57	■□□□□ 0.56	1e-6	■□□□□ 10.6
NCAPD3-213	ENST00000534532	C8orf37	Q96NL8	207 aa		18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	SEC63	Q9UGP8	760 aa	Known RBP	18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	EXOC6B	Q9Y2D4	811 aa		18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	PDRG1	Q9NUG6	133 aa		18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	SMARCC1	Q92922	1105 aa	Predicted RBP	18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	MINDY4B	A8MYZ0	360 aa		18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	FIBP	O43427	364 aa		18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	SSB	P05455	408 aa	Known RBP eCLIP	18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	LDHC	P07864	332 aa		18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	NUTM1	Q86Y26	1132 aa		18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	NAPB	Q9H115	298 aa		18.57	■□□□□ 0.56
NCAPD3-213	ENST00000534532	TTC21A	Q8NDW8	1320 aa		18.56	■□□□□ 0.56
NCAPD3-213	ENST00000534532	JAKMIP1	Q96N16	626 aa	Known RBP	18.56	■□□□□ 0.56
NCAPD3-213	ENST00000534532	DACH1	Q9UI36	760 aa		18.56	■□□□□ 0.56
NCAPD3-213	ENST00000534532	TMEM57	Q8N5G2	664 aa		18.56	■□□□□ 0.56
NCAPD3-213	ENST00000534532	KDM5B	Q9UGL1	1544 aa		18.56	■□□□□ 0.56
NCAPD3-213	ENST00000534532	SLFN5	Q08AF3	891 aa		18.56	■□□□□ 0.56
NCAPD3-213	ENST00000534532	ME1	P48163	572 aa		18.56	■□□□□ 0.56
NCAPD3-213	ENST00000534532	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.56	■□□□□ 0.56
NCAPD3-213	ENST00000534532	LARP1B	Q659C4	914 aa	Known RBP	18.55	■□□□□ 0.56
NCAPD3-213	ENST00000534532	ZCRB1	Q8TBF4	217 aa	Known RBP	18.55	■□□□□ 0.56
NCAPD3-213	ENST00000534532	SCAF11	Q99590	1463 aa	Known RBP	18.55	■□□□□ 0.56
NCAPD3-213	ENST00000534532	SNRPA1	P09661	255 aa	Known RBP	18.55	■□□□□ 0.56
NCAPD3-213	ENST00000534532	WDR78	Q5VTH9	848 aa		18.54	■□□□□ 0.56
NCAPD3-213	ENST00000534532	RUFY1	Q96T51	708 aa		18.54	■□□□□ 0.56
NCAPD3-213	ENST00000534532	MNS1	Q8NEH6	495 aa		18.54	■□□□□ 0.56
NCAPD3-213	ENST00000534532	ZNHIT6	Q9NWK9	470 aa	Known RBP	18.54	■□□□□ 0.56
NCAPD3-213	ENST00000534532	CWC25	Q9NXE8	425 aa	Predicted RBP	18.54	■□□□□ 0.56
NCAPD3-213	ENST00000534532	WDR33	Q9C0J8	1336 aa	Known RBP	18.54	■□□□□ 0.56
NCAPD3-213	ENST00000534532	PLCH2	O75038	1416 aa		18.54	■□□□□ 0.56
NCAPD3-213	ENST00000534532	NBPF6	Q5VWK0	638 aa		18.54	■□□□□ 0.56
NCAPD3-213	ENST00000534532	NBPF5P	Q86XG9	351 aa	Predicted RBP	18.54	■□□□□ 0.56
NCAPD3-213	ENST00000534532	NBPF4	Q96M43	638 aa		18.54	■□□□□ 0.56
NCAPD3-213	ENST00000534532	KRT85	P78386	507 aa		18.53	■□□□□ 0.56
NCAPD3-213	ENST00000534532	DDB1	Q16531	1140 aa		18.53	■□□□□ 0.56
NCAPD3-213	ENST00000534532	BRPF1	P55201	1214 aa	Predicted RBP	18.53	■□□□□ 0.56
NCAPD3-213	ENST00000534532	SMC2	O95347	1197 aa		18.53	■□□□□ 0.56
NCAPD3-213	ENST00000534532	C19orf44	Q9H6X5	657 aa		18.53	■□□□□ 0.56
NCAPD3-213	ENST00000534532	MX1	P20591	662 aa		18.52	■□□□□ 0.56
NCAPD3-213	ENST00000534532	PIBF1	Q8WXW3	757 aa		18.52	■□□□□ 0.56
NCAPD3-213	ENST00000534532	TRIM5	Q9C035	493 aa		18.52	■□□□□ 0.56
NCAPD3-213	ENST00000534532	MYO6	Q9UM54	1294 aa		18.52	■□□□□ 0.56
NCAPD3-213	ENST00000534532	CCDC196	A0A1B0GTZ2	297 aa		18.52	■□□□□ 0.56
NCAPD3-213	ENST00000534532	PDIA4	P13667	645 aa	Known RBP	18.52	■□□□□ 0.56
NCAPD3-213	ENST00000534532	IQCA1	Q86XH1	822 aa		18.52	■□□□□ 0.56
NCAPD3-213	ENST00000534532	LUC7L	Q9NQ29	371 aa	Known RBP	18.52	■□□□□ 0.56
NCAPD3-213	ENST00000534532	LDHAL6A	Q6ZMR3	332 aa		18.52	■□□□□ 0.55
NCAPD3-213	ENST00000534532	BOLA2	Q9H3K6	86 aa		18.52	■□□□□ 0.55
NCAPD3-213	ENST00000534532	RNF41	Q9H4P4	317 aa	Predicted RBP	18.52	■□□□□ 0.55
NCAPD3-213	ENST00000534532	MATR3	P43243	847 aa	Known RBP eCLIP	18.51	■□□□□ 0.55
NCAPD3-213	ENST00000534532	NBPF14	Q5TI25	921 aa		18.51	■□□□□ 0.55
NCAPD3-213	ENST00000534532	CTCFL	Q8NI51	663 aa	Predicted RBP	18.51	■□□□□ 0.55
NCAPD3-213	ENST00000534532	TNNT3	P45378	269 aa	Predicted RBP	18.51	■□□□□ 0.55
NCAPD3-213	ENST00000534532	TANGO6	Q9C0B7	1094 aa		18.51	■□□□□ 0.55
NCAPD3-213	ENST00000534532	MYO1B	O43795	1136 aa		18.51	■□□□□ 0.55
NCAPD3-213	ENST00000534532	CAGE1	Q8TC20	777 aa		18.51	■□□□□ 0.55
NCAPD3-213	ENST00000534532	TRIM21	P19474	475 aa	Known RBP	18.51	■□□□□ 0.55
NCAPD3-213	ENST00000534532	CCDC96	Q2M329	555 aa		18.51	■□□□□ 0.55
NCAPD3-213	ENST00000534532	SPTY2D1	Q68D10	685 aa	Predicted RBP	18.5	■□□□□ 0.55
NCAPD3-213	ENST00000534532	A2M	P01023	1474 aa		18.5	■□□□□ 0.55
NCAPD3-213	ENST00000534532	LRRC59	Q96AG4	307 aa	Known RBP	18.5	■□□□□ 0.55
NCAPD3-213	ENST00000534532	BAG3	O95817	575 aa		18.5	■□□□□ 0.55
NCAPD3-213	ENST00000534532	FLII	Q13045	1269 aa		18.5	■□□□□ 0.55
NCAPD3-213	ENST00000534532	CUL5	Q93034	780 aa		18.5	■□□□□ 0.55
NCAPD3-213	ENST00000534532	CFAP45	Q9UL16	551 aa		18.5	■□□□□ 0.55
NCAPD3-213	ENST00000534532	SSH1	Q8WYL5	1049 aa		18.49	■□□□□ 0.55
NCAPD3-213	ENST00000534532	FBXO3	Q9UK99	471 aa		18.49	■□□□□ 0.55
NCAPD3-213	ENST00000534532	CEP131	Q9UPN4	1083 aa		18.49	■□□□□ 0.55
NCAPD3-213	ENST00000534532	PRPF40A	O75400	957 aa	Known RBP	18.49	■□□□□ 0.55
NCAPD3-213	ENST00000534532	PTPRC	P08575	1304 aa		18.49	■□□□□ 0.55
NCAPD3-213	ENST00000534532	ZNF518A	Q6AHZ1	1483 aa		18.49	■□□□□ 0.55
NCAPD3-213	ENST00000534532	FEZ1	Q99689	392 aa		18.49	■□□□□ 0.55
NCAPD3-213	ENST00000534532	HSPA2	P54652	639 aa		18.49	■□□□□ 0.55
NCAPD3-213	ENST00000534532	PPP4R3A	Q6IN85	833 aa		18.49	■□□□□ 0.55
NCAPD3-213	ENST00000534532	SCLT1	Q96NL6	688 aa		18.49	■□□□□ 0.55
NCAPD3-213	ENST00000534532	ACBD3	Q9H3P7	528 aa		18.49	■□□□□ 0.55
NCAPD3-213	ENST00000534532	RANBP6	O60518	1105 aa	Known RBP	18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532	ATP6V1A	P38606	617 aa		18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532	TTF1	Q15361	905 aa	Predicted RBP	18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532	SETDB2	Q96T68	719 aa		18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532	CABP5	Q9NP86	173 aa		18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532		F6X3S4	739 aa		18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532	MAP3K2	Q9Y2U5	619 aa		18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532	POLD1	P28340	1107 aa		18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532	CCDC152	Q4G0S7	254 aa		18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532	MAP3K1	Q13233	1512 aa		18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532	DES	P17661	470 aa		18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532	FANCI	Q9NVI1	1328 aa		18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532	EHMT1	Q9H9B1	1298 aa		18.48	■□□□□ 0.55
NCAPD3-213	ENST00000534532	RIMS2	Q9UQ26	1411 aa		18.47	■□□□□ 0.55
NCAPD3-213	ENST00000534532	ACSBG1	Q96GR2	724 aa		18.47	■□□□□ 0.55
NCAPD3-213	ENST00000534532	DNAI2	Q9GZS0	605 aa		18.47	■□□□□ 0.55
NCAPD3-213	ENST00000534532	LRRFIP2	Q9Y608	721 aa	Known RBP	18.47	■□□□□ 0.55
NCAPD3-213	ENST00000534532	ANKRD36B	Q8N2N9	1353 aa		18.47	■□□□□ 0.55
NCAPD3-213	ENST00000534532	HLA-DOA	P06340	250 aa		18.47	■□□□□ 0.55
NCAPD3-213	ENST00000534532	ARGLU1	Q9NWB6	273 aa	Predicted RBP	18.47	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms