RNA–Protein interactions for RNA: ENST00000534495.1

LMNB2-206, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-206ENST00000534495 CFAP53Q96M91 514 aa28.7■■■□□ 2.18
LMNB2-206ENST00000534495 COL23A1Q86Y22 540 aaPredicted RBP28.69■■■□□ 2.18
LMNB2-206ENST00000534495 MTHFSDQ2M296 383 aaKnown RBP28.68■■■□□ 2.18
LMNB2-206ENST00000534495 ADAMTS7Q9UKP4 1686 aa28.67■■■□□ 2.18
LMNB2-206ENST00000534495 ATP6V1AP38606 617 aa28.67■■■□□ 2.18
LMNB2-206ENST00000534495 ITPK1Q13572 414 aa28.67■■■□□ 2.18
LMNB2-206ENST00000534495 NFATC2IPQ8NCF5 419 aa28.67■■■□□ 2.18
LMNB2-206ENST00000534495 LINC00116Q8NCU8 138 aa28.67■■■□□ 2.18
LMNB2-206ENST00000534495 FLAD1Q8NFF5 587 aa28.65■■■□□ 2.18
LMNB2-206ENST00000534495 AK7Q96M32 723 aa28.65■■■□□ 2.18
LMNB2-206ENST00000534495 SLC4A9Q96Q91 983 aa28.65■■■□□ 2.18
LMNB2-206ENST00000534495 LGR6Q9HBX8 967 aa28.65■■■□□ 2.18
LMNB2-206ENST00000534495 ARXQ96QS3 562 aa28.64■■■□□ 2.18
LMNB2-206ENST00000534495 RNMTO43148 476 aaKnown RBP28.63■■■□□ 2.17
LMNB2-206ENST00000534495 MSH5O43196 834 aa28.63■■■□□ 2.17
LMNB2-206ENST00000534495 AMIGO3Q86WK7 504 aa28.63■■■□□ 2.17
LMNB2-206ENST00000534495 MRC1P22897 1456 aa28.63■■■□□ 2.17
LMNB2-206ENST00000534495 COL5A3P25940 1745 aaPredicted RBP28.63■■■□□ 2.17
LMNB2-206ENST00000534495 RBM42Q9BTD8 480 aaKnown RBP28.62■■■□□ 2.17
LMNB2-206ENST00000534495 SLC52A2Q9HAB3 445 aa28.62■■■□□ 2.17
LMNB2-206ENST00000534495 NUDCQ9Y266 331 aa28.62■■■□□ 2.17
LMNB2-206ENST00000534495 FHDC1Q9C0D6 1143 aaPredicted RBP28.61■■■□□ 2.17
LMNB2-206ENST00000534495 MYH14Q7Z406 1995 aaKnown RBP28.59■■■□□ 2.17
LMNB2-206ENST00000534495 POLD1P28340 1107 aa28.59■■■□□ 2.17
LMNB2-206ENST00000534495 SYT17Q9BSW7 474 aa28.59■■■□□ 2.17
LMNB2-206ENST00000534495 RSPH6AQ9H0K4 717 aa28.59■■■□□ 2.17
LMNB2-206ENST00000534495 SSFA2P28290 1259 aa28.58■■■□□ 2.17
LMNB2-206ENST00000534495 GAS2L2Q8NHY3 880 aa28.58■■■□□ 2.17
LMNB2-206ENST00000534495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.57■■■□□ 2.16
LMNB2-206ENST00000534495 PRKAR2BP31323 418 aa28.57■■■□□ 2.16
LMNB2-206ENST00000534495 SMIM5Q71RC9 77 aa28.57■■■□□ 2.16
LMNB2-206ENST00000534495 MAP3K5Q99683 1374 aa28.57■■■□□ 2.16
LMNB2-206ENST00000534495 CICQ96RK0 1608 aaPredicted RBP28.57■■■□□ 2.16
LMNB2-206ENST00000534495 PTCD1O75127 700 aaKnown RBP28.56■■■□□ 2.16
LMNB2-206ENST00000534495 PHF14O94880 888 aa28.56■■■□□ 2.16
LMNB2-206ENST00000534495 U2AF1L5P0DN76 240 aaPredicted RBP28.56■■■□□ 2.16
LMNB2-206ENST00000534495 U2AF1Q01081 240 aaKnown RBP eCLIP28.56■■■□□ 2.16
LMNB2-206ENST00000534495 PHACTR3Q96KR7 559 aa28.56■■■□□ 2.16
LMNB2-206ENST00000534495 UTRNP46939 3433 aa28.55■■■□□ 2.16
LMNB2-206ENST00000534495 GNPATO15228 680 aa28.55■■■□□ 2.16
LMNB2-206ENST00000534495 DDX10Q13206 875 aaKnown RBP28.55■■■□□ 2.16
LMNB2-206ENST00000534495 TJP1Q07157 1748 aa28.55■■■□□ 2.16
LMNB2-206ENST00000534495 RC3H1Q5TC82 1133 aaKnown RBP28.54■■■□□ 2.16
LMNB2-206ENST00000534495 MSL1Q68DK7 614 aa28.54■■■□□ 2.16
LMNB2-206ENST00000534495 GNAT3A8MTJ3 354 aa28.53■■■□□ 2.16
LMNB2-206ENST00000534495 FCHSD2O94868 740 aa28.53■■■□□ 2.16
LMNB2-206ENST00000534495 SIPA1L3O60292 1781 aaPredicted RBP28.52■■■□□ 2.16
LMNB2-206ENST00000534495 CNTNAP4Q9C0A0 1308 aa28.52■■■□□ 2.16
LMNB2-206ENST00000534495 IL17REQ8NFR9 667 aa28.51■■■□□ 2.15
LMNB2-206ENST00000534495 UBR2Q8IWV8 1755 aa28.5■■■□□ 2.15
LMNB2-206ENST00000534495 SLC39A6Q13433 755 aa28.5■■■□□ 2.15
LMNB2-206ENST00000534495 RTCBQ9Y3I0 505 aaKnown RBP28.49■■■□□ 2.15
LMNB2-206ENST00000534495 GOLGB1Q14789 3259 aaKnown RBP28.49■■■□□ 2.15
LMNB2-206ENST00000534495 KCPQ6ZWJ8 1503 aa28.48■■■□□ 2.15
LMNB2-206ENST00000534495 RALBP1Q15311 655 aa28.48■■■□□ 2.15
LMNB2-206ENST00000534495 DCAF8L1A6NGE4 600 aa28.47■■■□□ 2.15
LMNB2-206ENST00000534495 CEMIPQ8WUJ3 1361 aa28.47■■■□□ 2.15
LMNB2-206ENST00000534495 RPS6KA4O75676 772 aa28.46■■■□□ 2.15
LMNB2-206ENST00000534495 ADRA2BP18089 450 aa28.45■■■□□ 2.14
LMNB2-206ENST00000534495 ZEB1P37275 1124 aaPredicted RBP28.45■■■□□ 2.14
LMNB2-206ENST00000534495 CRKLP46109 303 aaKnown RBP28.45■■■□□ 2.14
LMNB2-206ENST00000534495 TEFQ10587 303 aa28.45■■■□□ 2.14
LMNB2-206ENST00000534495 TRAPPC3LQ5T215 181 aa28.45■■■□□ 2.14
LMNB2-206ENST00000534495 C4AP0C0L4 1744 aa28.44■■■□□ 2.14
LMNB2-206ENST00000534495 KLHL34Q8N239 644 aa28.44■■■□□ 2.14
LMNB2-206ENST00000534495 DNAJC10Q8IXB1 793 aa28.43■■■□□ 2.14
LMNB2-206ENST00000534495 ARHGEF1Q92888 912 aaKnown RBP28.42■■■□□ 2.14
LMNB2-206ENST00000534495 DLG5Q8TDM6 1919 aa28.41■■■□□ 2.14
LMNB2-206ENST00000534495 VSIG10Q8N0Z9 540 aa28.41■■■□□ 2.14
LMNB2-206ENST00000534495 INTS5Q6P9B9 1019 aaKnown RBP28.4■■■□□ 2.14
LMNB2-206ENST00000534495 ZNF790Q6PG37 636 aa28.39■■■□□ 2.14
LMNB2-206ENST00000534495 TTC5Q8N0Z6 440 aa28.39■■■□□ 2.14
LMNB2-206ENST00000534495 NLGN2Q8NFZ4 835 aa28.39■■■□□ 2.14
LMNB2-206ENST00000534495 CYP19A1P11511 503 aaPredicted RBP28.38■■■□□ 2.13
LMNB2-206ENST00000534495 RFC4P35249 363 aa28.37■■■□□ 2.13
LMNB2-206ENST00000534495 PLEKHF1Q96S99 279 aa28.37■■■□□ 2.13
LMNB2-206ENST00000534495 CCDC87Q9NVE4 849 aa28.37■■■□□ 2.13
LMNB2-206ENST00000534495 HTATSF1O43719 755 aaKnown RBP28.36■■■□□ 2.13
LMNB2-206ENST00000534495 RTF1Q92541 710 aaKnown RBP28.36■■■□□ 2.13
LMNB2-206ENST00000534495 CD2APQ9Y5K6 639 aa28.36■■■□□ 2.13
LMNB2-206ENST00000534495 MYBBP1AQ9BQG0 1328 aaKnown RBP28.36■■■□□ 2.13
LMNB2-206ENST00000534495 GYS1P13807 737 aa28.35■■■□□ 2.13
LMNB2-206ENST00000534495 MCM10Q7L590 875 aa28.35■■■□□ 2.13
LMNB2-206ENST00000534495 NLGN1Q8N2Q7 840 aa28.35■■■□□ 2.13
LMNB2-206ENST00000534495 ZNF496Q96IT1 587 aaPredicted RBP28.35■■■□□ 2.13
LMNB2-206ENST00000534495 CHD4Q14839 1912 aa28.33■■■□□ 2.13
LMNB2-206ENST00000534495 NEFMP07197 916 aa28.33■■■□□ 2.13
LMNB2-206ENST00000534495 MMP10P09238 476 aa28.33■■■□□ 2.13
LMNB2-206ENST00000534495 HEG1Q9ULI3 1381 aa28.33■■■□□ 2.13
LMNB2-206ENST00000534495 BTBD11A6QL63 1104 aa28.32■■■□□ 2.12
LMNB2-206ENST00000534495 SOS1Q07889 1333 aaPredicted RBP28.32■■■□□ 2.12
LMNB2-206ENST00000534495 DCTN1Q14203 1278 aa28.31■■■□□ 2.12
LMNB2-206ENST00000534495 PNNQ9H307 717 aaKnown RBP28.31■■■□□ 2.12
LMNB2-206ENST00000534495 USP42Q9H9J4 1324 aaKnown RBP28.31■■■□□ 2.12
LMNB2-206ENST00000534495 KIF13BQ9NQT8 1826 aa28.3■■■□□ 2.12
LMNB2-206ENST00000534495 ZBTB1Q9Y2K1 713 aa28.3■■■□□ 2.12
LMNB2-206ENST00000534495 KCNQ3O43525 872 aa28.29■■■□□ 2.12
LMNB2-206ENST00000534495 GPR162Q16538 588 aa28.29■■■□□ 2.12
LMNB2-206ENST00000534495 FMNL2Q96PY5 1086 aa28.29■■■□□ 2.12
LMNB2-206ENST00000534495 SRP68Q9UHB9 627 aaKnown RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms