RNA–Protein interactions for RNA: ENST00000534435.1

SHARPIN-210, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-210ENST00000534435 CHRNA5P30532 468 aa11.83□□□□□ -0.52
SHARPIN-210ENST00000534435 FAM161AQ3B820 660 aa11.83□□□□□ -0.52
SHARPIN-210ENST00000534435 MKRN1Q9UHC7 482 aaKnown RBP11.83□□□□□ -0.52
SHARPIN-210ENST00000534435 NSD3Q9BZ95 1437 aa11.83□□□□□ -0.52
SHARPIN-210ENST00000534435 TAF1LQ8IZX4 1826 aa11.83□□□□□ -0.52
SHARPIN-210ENST00000534435 UBR3Q6ZT12 1888 aa11.83□□□□□ -0.52
SHARPIN-210ENST00000534435 FOXN1O15353 648 aa11.82□□□□□ -0.52
SHARPIN-210ENST00000534435 ATP6V1AP38606 617 aa11.82□□□□□ -0.52
SHARPIN-210ENST00000534435 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
SHARPIN-210ENST00000534435 DCAF5Q96JK2 942 aa11.82□□□□□ -0.52
SHARPIN-210ENST00000534435 GYS1P13807 737 aa11.81□□□□□ -0.52
SHARPIN-210ENST00000534435 TMF1P82094 1093 aa11.81□□□□□ -0.52
SHARPIN-210ENST00000534435 HSP90AB2PQ58FF8 381 aa11.81□□□□□ -0.52
SHARPIN-210ENST00000534435 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
SHARPIN-210ENST00000534435 COG3Q96JB2 828 aa11.81□□□□□ -0.52
SHARPIN-210ENST00000534435 SLC4A9Q96Q91 983 aa11.81□□□□□ -0.52
SHARPIN-210ENST00000534435 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
SHARPIN-210ENST00000534435 ZNF316A6NFI3 1004 aaPredicted RBP11.79□□□□□ -0.52
SHARPIN-210ENST00000534435 DDR1Q08345 913 aa11.79□□□□□ -0.52
SHARPIN-210ENST00000534435 DALRD3Q5D0E6 543 aaKnown RBP11.79□□□□□ -0.52
SHARPIN-210ENST00000534435 TRAPPC3LQ5T215 181 aa11.79□□□□□ -0.52
SHARPIN-210ENST00000534435 DIEXFQ68CQ4 756 aaKnown RBP11.79□□□□□ -0.52
SHARPIN-210ENST00000534435 SIN3AQ96ST3 1273 aa11.79□□□□□ -0.52
SHARPIN-210ENST00000534435 ATG3Q9NT62 314 aa11.79□□□□□ -0.52
SHARPIN-210ENST00000534435 PIM2Q9P1W9 311 aa11.79□□□□□ -0.52
SHARPIN-210ENST00000534435 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
SHARPIN-210ENST00000534435 CGNL1Q0VF96 1302 aa11.79□□□□□ -0.52
SHARPIN-210ENST00000534435 PKD1L3Q7Z443 1732 aa11.78□□□□□ -0.52
SHARPIN-210ENST00000534435 POTECB2RU33 542 aa11.78□□□□□ -0.52
SHARPIN-210ENST00000534435 NLGN1Q8N2Q7 840 aa11.78□□□□□ -0.52
SHARPIN-210ENST00000534435 GGNBP2Q9H3C7 697 aa11.78□□□□□ -0.52
SHARPIN-210ENST00000534435 TERF2IPQ9NYB0 399 aa11.78□□□□□ -0.52
SHARPIN-210ENST00000534435 PARP3Q9Y6F1 533 aa11.78□□□□□ -0.52
SHARPIN-210ENST00000534435 KIF13BQ9NQT8 1826 aa11.77□□□□□ -0.52
SHARPIN-210ENST00000534435 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
SHARPIN-210ENST00000534435 POTEJP0CG39 1038 aa11.77□□□□□ -0.53
SHARPIN-210ENST00000534435 TMOD3Q9NYL9 352 aa11.77□□□□□ -0.53
SHARPIN-210ENST00000534435 RTCBQ9Y3I0 505 aaKnown RBP11.77□□□□□ -0.53
SHARPIN-210ENST00000534435 RTL1A6NKG5 1358 aa11.77□□□□□ -0.53
SHARPIN-210ENST00000534435 MAP2P11137 1827 aaKnown RBP11.76□□□□□ -0.53
SHARPIN-210ENST00000534435 VEGFAP15692 232 aaPredicted RBP11.76□□□□□ -0.53
SHARPIN-210ENST00000534435 FKBP8Q14318 412 aa11.76□□□□□ -0.53
SHARPIN-210ENST00000534435 C4AP0C0L4 1744 aa11.76□□□□□ -0.53
SHARPIN-210ENST00000534435 KDRP35968 1356 aa11.76□□□□□ -0.53
SHARPIN-210ENST00000534435 GLTPD2A6NH11 291 aa11.75□□□□□ -0.53
SHARPIN-210ENST00000534435 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
SHARPIN-210ENST00000534435 RBM42Q9BTD8 480 aaKnown RBP11.75□□□□□ -0.53
SHARPIN-210ENST00000534435 SMG6Q86US8 1419 aaKnown RBP11.75□□□□□ -0.53
SHARPIN-210ENST00000534435 RFC4P35249 363 aa11.74□□□□□ -0.53
SHARPIN-210ENST00000534435 NEUROD1Q13562 356 aa11.74□□□□□ -0.53
SHARPIN-210ENST00000534435 TNRC6CQ9HCJ0 1690 aaKnown RBP11.74□□□□□ -0.53
SHARPIN-210ENST00000534435 KDM6AO15550 1401 aaPredicted RBP11.73□□□□□ -0.53
SHARPIN-210ENST00000534435 INSRP06213 1382 aa11.73□□□□□ -0.53
SHARPIN-210ENST00000534435 LBX1P52954 281 aa11.73□□□□□ -0.53
SHARPIN-210ENST00000534435 ABHD8Q96I13 439 aa11.73□□□□□ -0.53
SHARPIN-210ENST00000534435 EMILIN1Q9Y6C2 1016 aa11.73□□□□□ -0.53
SHARPIN-210ENST00000534435 FYB1O15117 783 aa11.72□□□□□ -0.53
SHARPIN-210ENST00000534435 CENPBP07199 599 aaPredicted RBP11.72□□□□□ -0.53
SHARPIN-210ENST00000534435 CARD11Q9BXL7 1154 aa11.72□□□□□ -0.53
SHARPIN-210ENST00000534435 BRCA1P38398 1863 aaKnown RBP11.72□□□□□ -0.53
SHARPIN-210ENST00000534435 NFKBIEO00221 500 aa11.71□□□□□ -0.53
SHARPIN-210ENST00000534435 RPS6KA4O75676 772 aa11.71□□□□□ -0.53
SHARPIN-210ENST00000534435 PHKG2P15735 406 aa11.71□□□□□ -0.53
SHARPIN-210ENST00000534435 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
SHARPIN-210ENST00000534435 VEGFBP49765 207 aa11.71□□□□□ -0.53
SHARPIN-210ENST00000534435 PRDM10Q9NQV6 1147 aa11.71□□□□□ -0.53
SHARPIN-210ENST00000534435 CREBZFQ9NS37 354 aa11.71□□□□□ -0.53
SHARPIN-210ENST00000534435 ITGB4P16144 1822 aa11.71□□□□□ -0.54
SHARPIN-210ENST00000534435 CNTNAP1P78357 1384 aa11.7□□□□□ -0.54
SHARPIN-210ENST00000534435 POLRMTO00411 1230 aaKnown RBP11.7□□□□□ -0.54
SHARPIN-210ENST00000534435 LMNB1P20700 586 aa11.7□□□□□ -0.54
SHARPIN-210ENST00000534435 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
SHARPIN-210ENST00000534435 SPG7Q9UQ90 795 aa11.7□□□□□ -0.54
SHARPIN-210ENST00000534435 FLT4P35916 1363 aa11.69□□□□□ -0.54
SHARPIN-210ENST00000534435 CNTNAP4Q9C0A0 1308 aa11.69□□□□□ -0.54
SHARPIN-210ENST00000534435 PPM1GO15355 546 aaPredicted RBP11.69□□□□□ -0.54
SHARPIN-210ENST00000534435 ADRA2BP18089 450 aa11.69□□□□□ -0.54
SHARPIN-210ENST00000534435 CTCFP49711 727 aaPredicted RBP11.69□□□□□ -0.54
SHARPIN-210ENST00000534435 USP42Q9H9J4 1324 aaKnown RBP11.68□□□□□ -0.54
SHARPIN-210ENST00000534435 PTCD1O75127 700 aaKnown RBP11.68□□□□□ -0.54
SHARPIN-210ENST00000534435 HSPA8P11142 646 aaKnown RBP11.68□□□□□ -0.54
SHARPIN-210ENST00000534435 CRKLP46109 303 aaKnown RBP11.68□□□□□ -0.54
SHARPIN-210ENST00000534435 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
SHARPIN-210ENST00000534435 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
SHARPIN-210ENST00000534435 CARMIL3Q8ND23 1372 aa11.67□□□□□ -0.54
SHARPIN-210ENST00000534435 ARFGEF1Q9Y6D6 1849 aa11.67□□□□□ -0.54
SHARPIN-210ENST00000534435 CCDC85CA6NKD9 419 aa11.67□□□□□ -0.54
SHARPIN-210ENST00000534435 RC3H1Q5TC82 1133 aaKnown RBP11.67□□□□□ -0.54
SHARPIN-210ENST00000534435 AIDAQ96BJ3 306 aa11.67□□□□□ -0.54
SHARPIN-210ENST00000534435 TESK2Q96S53 571 aa11.67□□□□□ -0.54
SHARPIN-210ENST00000534435 EYA1Q99502 592 aa11.67□□□□□ -0.54
SHARPIN-210ENST00000534435 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
SHARPIN-210ENST00000534435 NCAPD2Q15021 1401 aa11.67□□□□□ -0.54
SHARPIN-210ENST00000534435 ZC3H4Q9UPT8 1303 aaKnown RBP11.66□□□□□ -0.54
SHARPIN-210ENST00000534435 DDNO94850 711 aaPredicted RBP11.66□□□□□ -0.54
SHARPIN-210ENST00000534435 TM4SF1P30408 202 aa11.66□□□□□ -0.54
SHARPIN-210ENST00000534435 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
SHARPIN-210ENST00000534435 IFNL2Q8IZJ0 200 aa11.66□□□□□ -0.54
SHARPIN-210ENST00000534435 MLLT1Q03111 559 aaPredicted RBP11.65□□□□□ -0.54
SHARPIN-210ENST00000534435 TIMELESSQ9UNS1 1208 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms