RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 KDM6AO15550 1401 aaPredicted RBP31.44■■■□□ 2.62
YIF1A-213ENST00000534374 AKAP4Q5JQC9 854 aa31.44■■■□□ 2.62
YIF1A-213ENST00000534374 HMOX1P09601 288 aa31.43■■■□□ 2.62
YIF1A-213ENST00000534374 LINC00116Q8NCU8 138 aa31.43■■■□□ 2.62
YIF1A-213ENST00000534374 C4BP0C0L5 1744 aa31.43■■■□□ 2.62
YIF1A-213ENST00000534374 ITPK1Q13572 414 aa31.42■■■□□ 2.62
YIF1A-213ENST00000534374 CNGB1Q14028 1251 aaPredicted RBP31.42■■■□□ 2.62
YIF1A-213ENST00000534374 SSFA2P28290 1259 aa31.4■■■□□ 2.62
YIF1A-213ENST00000534374 NFATC2IPQ8NCF5 419 aa31.4■■■□□ 2.62
YIF1A-213ENST00000534374 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.38■■■□□ 2.61
YIF1A-213ENST00000534374 UTRNP46939 3433 aa31.37■■■□□ 2.61
YIF1A-213ENST00000534374 AMIGO3Q86WK7 504 aa31.37■■■□□ 2.61
YIF1A-213ENST00000534374 SLC4A9Q96Q91 983 aa31.37■■■□□ 2.61
YIF1A-213ENST00000534374 RBM42Q9BTD8 480 aaKnown RBP31.37■■■□□ 2.61
YIF1A-213ENST00000534374 RC3H1Q5TC82 1133 aaKnown RBP31.35■■■□□ 2.61
YIF1A-213ENST00000534374 UBR3Q6ZT12 1888 aa31.35■■■□□ 2.61
YIF1A-213ENST00000534374 COL3A1P02461 1466 aaPredicted RBP31.34■■■□□ 2.61
YIF1A-213ENST00000534374 MTHFSDQ2M296 383 aaKnown RBP31.34■■■□□ 2.61
YIF1A-213ENST00000534374 ZNF831Q5JPB2 1677 aa31.33■■■□□ 2.61
YIF1A-213ENST00000534374 GNPATO15228 680 aa31.33■■■□□ 2.61
YIF1A-213ENST00000534374 PHF14O94880 888 aa31.33■■■□□ 2.61
YIF1A-213ENST00000534374 MSL1Q68DK7 614 aa31.33■■■□□ 2.61
YIF1A-213ENST00000534374 CFAP53Q96M91 514 aa31.33■■■□□ 2.61
YIF1A-213ENST00000534374 U2SURPO15042 1029 aaKnown RBP31.32■■■□□ 2.6
YIF1A-213ENST00000534374 SLC52A2Q9HAB3 445 aa31.32■■■□□ 2.6
YIF1A-213ENST00000534374 LGR6Q9HBX8 967 aa31.32■■■□□ 2.6
YIF1A-213ENST00000534374 SCN11AQ9UI33 1791 aa31.31■■■□□ 2.6
YIF1A-213ENST00000534374 RNMTO43148 476 aaKnown RBP31.31■■■□□ 2.6
YIF1A-213ENST00000534374 SMIM5Q71RC9 77 aa31.3■■■□□ 2.6
YIF1A-213ENST00000534374 KLHL34Q8N239 644 aa31.3■■■□□ 2.6
YIF1A-213ENST00000534374 PTCD1O75127 700 aaKnown RBP31.29■■■□□ 2.6
YIF1A-213ENST00000534374 RTCBQ9Y3I0 505 aaKnown RBP31.29■■■□□ 2.6
YIF1A-213ENST00000534374 PPP2R1AP30153 589 aa31.28■■■□□ 2.6
YIF1A-213ENST00000534374 TRAPPC3LQ5T215 181 aa31.28■■■□□ 2.6
YIF1A-213ENST00000534374 CNTNAP4Q9C0A0 1308 aa31.27■■■□□ 2.6
YIF1A-213ENST00000534374 NUDCQ9Y266 331 aa31.27■■■□□ 2.6
YIF1A-213ENST00000534374 ADRA2BP18089 450 aa31.26■■■□□ 2.59
YIF1A-213ENST00000534374 CD2APQ9Y5K6 639 aa31.26■■■□□ 2.59
YIF1A-213ENST00000534374 RPS6KA4O75676 772 aa31.25■■■□□ 2.59
YIF1A-213ENST00000534374 GAS2L2Q8NHY3 880 aa31.25■■■□□ 2.59
YIF1A-213ENST00000534374 GPR162Q16538 588 aa31.23■■■□□ 2.59
YIF1A-213ENST00000534374 NLGN2Q8NFZ4 835 aa31.23■■■□□ 2.59
YIF1A-213ENST00000534374 ARHGEF1Q92888 912 aaKnown RBP31.21■■■□□ 2.59
YIF1A-213ENST00000534374 GOLGB1Q14789 3259 aaKnown RBP31.2■■■□□ 2.59
YIF1A-213ENST00000534374 GNAT3A8MTJ3 354 aa31.2■■■□□ 2.59
YIF1A-213ENST00000534374 MRC1P22897 1456 aa31.2■■■□□ 2.58
YIF1A-213ENST00000534374 MYH14Q7Z406 1995 aaKnown RBP31.19■■■□□ 2.58
YIF1A-213ENST00000534374 COL5A3P25940 1745 aaPredicted RBP31.19■■■□□ 2.58
YIF1A-213ENST00000534374 NLGN1Q8N2Q7 840 aa31.19■■■□□ 2.58
YIF1A-213ENST00000534374 CRKLP46109 303 aaKnown RBP31.18■■■□□ 2.58
YIF1A-213ENST00000534374 RSPH6AQ9H0K4 717 aa31.18■■■□□ 2.58
YIF1A-213ENST00000534374 ADAMTS7Q9UKP4 1686 aa31.18■■■□□ 2.58
YIF1A-213ENST00000534374 RFC4P35249 363 aa31.17■■■□□ 2.58
YIF1A-213ENST00000534374 SLC39A6Q13433 755 aa31.17■■■□□ 2.58
YIF1A-213ENST00000534374 ZNF784Q8NCA9 323 aaPredicted RBP31.17■■■□□ 2.58
YIF1A-213ENST00000534374 FCHSD2O94868 740 aa31.16■■■□□ 2.58
YIF1A-213ENST00000534374 PRKAR2BP31323 418 aa31.16■■■□□ 2.58
YIF1A-213ENST00000534374 IL17REQ8NFR9 667 aa31.16■■■□□ 2.58
YIF1A-213ENST00000534374 PHACTR3Q96KR7 559 aa31.16■■■□□ 2.58
YIF1A-213ENST00000534374 VIRMAQ69YN4 1812 aaKnown RBP31.15■■■□□ 2.58
YIF1A-213ENST00000534374 U2AF1L5P0DN76 240 aaPredicted RBP31.15■■■□□ 2.58
YIF1A-213ENST00000534374 U2AF1Q01081 240 aaKnown RBP eCLIP31.15■■■□□ 2.58
YIF1A-213ENST00000534374 VSIG10Q8N0Z9 540 aa31.15■■■□□ 2.58
YIF1A-213ENST00000534374 INTS5Q6P9B9 1019 aaKnown RBP31.13■■■□□ 2.57
YIF1A-213ENST00000534374 DNAJC10Q8IXB1 793 aa31.13■■■□□ 2.57
YIF1A-213ENST00000534374 CHD4Q14839 1912 aa31.13■■■□□ 2.57
YIF1A-213ENST00000534374 MMP10P09238 476 aa31.12■■■□□ 2.57
YIF1A-213ENST00000534374 TEFQ10587 303 aa31.12■■■□□ 2.57
YIF1A-213ENST00000534374 PELP1Q8IZL8 1130 aaKnown RBP31.12■■■□□ 2.57
YIF1A-213ENST00000534374 CICQ96RK0 1608 aaPredicted RBP31.12■■■□□ 2.57
YIF1A-213ENST00000534374 GRIN3BO60391 1043 aa31.11■■■□□ 2.57
YIF1A-213ENST00000534374 GYS1P13807 737 aa31.11■■■□□ 2.57
YIF1A-213ENST00000534374 CYP19A1P11511 503 aaPredicted RBP31.1■■■□□ 2.57
YIF1A-213ENST00000534374 CCDC87Q9NVE4 849 aa31.09■■■□□ 2.57
YIF1A-213ENST00000534374 TJP1Q07157 1748 aa31.08■■■□□ 2.57
YIF1A-213ENST00000534374 TTC5Q8N0Z6 440 aa31.08■■■□□ 2.57
YIF1A-213ENST00000534374 CEMIPQ8WUJ3 1361 aa31.07■■■□□ 2.56
YIF1A-213ENST00000534374 YBX3P16989 372 aaKnown RBP eCLIP31.06■■■□□ 2.566e-8■□□□□ 8.4
YIF1A-213ENST00000534374 ZNF790Q6PG37 636 aa31.06■■■□□ 2.56
YIF1A-213ENST00000534374 KCPQ6ZWJ8 1503 aa31.06■■■□□ 2.56
YIF1A-213ENST00000534374 USP42Q9H9J4 1324 aaKnown RBP31.03■■■□□ 2.56
YIF1A-213ENST00000534374 TEX13AQ9BXU3 409 aaPredicted RBP31.03■■■□□ 2.56
YIF1A-213ENST00000534374 SOS1Q07889 1333 aaPredicted RBP31.02■■■□□ 2.56
YIF1A-213ENST00000534374 HTATSF1O43719 755 aaKnown RBP31.02■■■□□ 2.56
YIF1A-213ENST00000534374 STARD3NLO95772 234 aa31.02■■■□□ 2.56
YIF1A-213ENST00000534374 RTF1Q92541 710 aaKnown RBP31.02■■■□□ 2.56
YIF1A-213ENST00000534374 PARP3Q9Y6F1 533 aa31.02■■■□□ 2.56
YIF1A-213ENST00000534374 RALBP1Q15311 655 aa31.01■■■□□ 2.55
YIF1A-213ENST00000534374 ZNF496Q96IT1 587 aaPredicted RBP31.01■■■□□ 2.55
YIF1A-213ENST00000534374 SRP68Q9UHB9 627 aaKnown RBP31.01■■■□□ 2.55
YIF1A-213ENST00000534374 ZPR1O75312 459 aa31■■■□□ 2.55
YIF1A-213ENST00000534374 TGFB2P61812 414 aa31■■■□□ 2.55
YIF1A-213ENST00000534374 UBR2Q8IWV8 1755 aa31■■■□□ 2.55
YIF1A-213ENST00000534374 C4AP0C0L4 1744 aa30.98■■■□□ 2.55
YIF1A-213ENST00000534374 HEG1Q9ULI3 1381 aa30.98■■■□□ 2.55
YIF1A-213ENST00000534374 BTBD11A6QL63 1104 aa30.98■■■□□ 2.55
YIF1A-213ENST00000534374 FKBP8Q14318 412 aa30.98■■■□□ 2.55
YIF1A-213ENST00000534374 ZBTB1Q9Y2K1 713 aa30.98■■■□□ 2.55
YIF1A-213ENST00000534374 SIPA1L3O60292 1781 aaPredicted RBP30.97■■■□□ 2.55
YIF1A-213ENST00000534374 NEFMP07197 916 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms