RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 LINC00116Q8NCU8 138 aa16.53■□□□□ 0.24
CHRDL2-209ENST00000534276 NLGN2Q8NFZ4 835 aa16.53■□□□□ 0.24
CHRDL2-209ENST00000534276 DCAF5Q96JK2 942 aa16.53■□□□□ 0.24
CHRDL2-209ENST00000534276 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.23
CHRDL2-209ENST00000534276 ITPK1Q13572 414 aa16.52■□□□□ 0.23
CHRDL2-209ENST00000534276 ZNF530Q6P9A1 599 aaPredicted RBP16.52■□□□□ 0.23
CHRDL2-209ENST00000534276 TAF1LQ8IZX4 1826 aa16.51■□□□□ 0.23
CHRDL2-209ENST00000534276 C4BP0C0L5 1744 aa16.51■□□□□ 0.23
CHRDL2-209ENST00000534276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.51■□□□□ 0.23
CHRDL2-209ENST00000534276 IL13P35225 146 aa16.51■□□□□ 0.23
CHRDL2-209ENST00000534276 ATP6V1AP38606 617 aa16.51■□□□□ 0.23
CHRDL2-209ENST00000534276 SMIM5Q71RC9 77 aa16.51■□□□□ 0.23
CHRDL2-209ENST00000534276 PHF14O94880 888 aa16.5■□□□□ 0.23
CHRDL2-209ENST00000534276 SSFA2P28290 1259 aa16.5■□□□□ 0.23
CHRDL2-209ENST00000534276 SULT6B1Q6IMI4 303 aa16.5■□□□□ 0.23
CHRDL2-209ENST00000534276 ZNF784Q8NCA9 323 aaPredicted RBP16.49■□□□□ 0.23
CHRDL2-209ENST00000534276 KDRP35968 1356 aa16.49■□□□□ 0.23
CHRDL2-209ENST00000534276 KDM6AO15550 1401 aaPredicted RBP16.48■□□□□ 0.23
CHRDL2-209ENST00000534276 GNPATO15228 680 aa16.48■□□□□ 0.23
CHRDL2-209ENST00000534276 PELP1Q8IZL8 1130 aaKnown RBP16.48■□□□□ 0.23
CHRDL2-209ENST00000534276 MTHFSP49914 203 aa16.47■□□□□ 0.23
CHRDL2-209ENST00000534276 CABP4P57796 275 aa16.47■□□□□ 0.23
CHRDL2-209ENST00000534276 C1orf141Q5JVX7 400 aa16.47■□□□□ 0.23
CHRDL2-209ENST00000534276 SLC4A9Q96Q91 983 aa16.47■□□□□ 0.23
CHRDL2-209ENST00000534276 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
CHRDL2-209ENST00000534276 MYBBP1AQ9BQG0 1328 aaKnown RBP16.46■□□□□ 0.23
CHRDL2-209ENST00000534276 UBR3Q6ZT12 1888 aa16.46■□□□□ 0.23
CHRDL2-209ENST00000534276 RBM42Q9BTD8 480 aaKnown RBP16.45■□□□□ 0.22
CHRDL2-209ENST00000534276 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
CHRDL2-209ENST00000534276 YBX3P16989 372 aaKnown RBP eCLIP16.45■□□□□ 0.22
CHRDL2-209ENST00000534276 CC2D1BQ5T0F9 858 aaKnown RBP16.45■□□□□ 0.22
CHRDL2-209ENST00000534276 GRIN3BO60391 1043 aa16.43■□□□□ 0.22
CHRDL2-209ENST00000534276 CHD4Q14839 1912 aa16.43■□□□□ 0.22
CHRDL2-209ENST00000534276 RC3H1Q5TC82 1133 aaKnown RBP16.43■□□□□ 0.22
CHRDL2-209ENST00000534276 NFATC2IPQ8NCF5 419 aa16.43■□□□□ 0.22
CHRDL2-209ENST00000534276 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
CHRDL2-209ENST00000534276 CNTNAP4Q9C0A0 1308 aa16.41■□□□□ 0.22
CHRDL2-209ENST00000534276 PTCD1O75127 700 aaKnown RBP16.41■□□□□ 0.22
CHRDL2-209ENST00000534276 HMOX1P09601 288 aa16.41■□□□□ 0.22
CHRDL2-209ENST00000534276 ADRA2BP18089 450 aa16.41■□□□□ 0.22
CHRDL2-209ENST00000534276 AKAP4Q5JQC9 854 aa16.41■□□□□ 0.22
CHRDL2-209ENST00000534276 TRAPPC3LQ5T215 181 aa16.41■□□□□ 0.22
CHRDL2-209ENST00000534276 DIAPH1O60610 1272 aaKnown RBP16.4■□□□□ 0.22
CHRDL2-209ENST00000534276 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
CHRDL2-209ENST00000534276 UTRNP46939 3433 aa16.39■□□□□ 0.21
CHRDL2-209ENST00000534276 ZNF831Q5JPB2 1677 aa16.39■□□□□ 0.21
CHRDL2-209ENST00000534276 RPS6KA4O75676 772 aa16.39■□□□□ 0.21
CHRDL2-209ENST00000534276 MMP10P09238 476 aa16.39■□□□□ 0.21
CHRDL2-209ENST00000534276 ARHGEF1Q92888 912 aaKnown RBP16.39■□□□□ 0.21
CHRDL2-209ENST00000534276 NLGN1Q8N2Q7 840 aa16.38■□□□□ 0.21
CHRDL2-209ENST00000534276 LGR6Q9HBX8 967 aa16.38■□□□□ 0.21
CHRDL2-209ENST00000534276 CNGB1Q14028 1251 aaPredicted RBP16.37■□□□□ 0.21
CHRDL2-209ENST00000534276 SLC52A2Q9HAB3 445 aa16.37■□□□□ 0.21
CHRDL2-209ENST00000534276 RNMTO43148 476 aaKnown RBP16.36■□□□□ 0.21
CHRDL2-209ENST00000534276 MTHFSDQ2M296 383 aaKnown RBP16.36■□□□□ 0.21
CHRDL2-209ENST00000534276 RFC4P35249 363 aa16.36■□□□□ 0.21
CHRDL2-209ENST00000534276 CRKLP46109 303 aaKnown RBP16.36■□□□□ 0.21
CHRDL2-209ENST00000534276 COL5A3P25940 1745 aaPredicted RBP16.35■□□□□ 0.21
CHRDL2-209ENST00000534276 GYS1P13807 737 aa16.35■□□□□ 0.21
CHRDL2-209ENST00000534276 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
CHRDL2-209ENST00000534276 COL3A1P02461 1466 aaPredicted RBP16.34■□□□□ 0.21
CHRDL2-209ENST00000534276 CCDC184Q52MB2 194 aa16.34■□□□□ 0.21
CHRDL2-209ENST00000534276 WWC3Q9ULE0 1092 aa16.34■□□□□ 0.21
CHRDL2-209ENST00000534276 MRC1P22897 1456 aa16.33■□□□□ 0.21
CHRDL2-209ENST00000534276 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.2
CHRDL2-209ENST00000534276 MYH14Q7Z406 1995 aaKnown RBP16.33■□□□□ 0.2
CHRDL2-209ENST00000534276 U2SURPO15042 1029 aaKnown RBP16.33■□□□□ 0.2
CHRDL2-209ENST00000534276 SLC39A6Q13433 755 aa16.33■□□□□ 0.2
CHRDL2-209ENST00000534276 INTS5Q6P9B9 1019 aaKnown RBP16.33■□□□□ 0.2
CHRDL2-209ENST00000534276 DNAJC10Q8IXB1 793 aa16.33■□□□□ 0.2
CHRDL2-209ENST00000534276 PNISRQ8TF01 805 aaKnown RBP16.33■□□□□ 0.2
CHRDL2-209ENST00000534276 PPP2R1AP30153 589 aa16.32■□□□□ 0.2
CHRDL2-209ENST00000534276 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
CHRDL2-209ENST00000534276 USP42Q9H9J4 1324 aaKnown RBP16.31■□□□□ 0.2
CHRDL2-209ENST00000534276 C1QTNF8P60827 252 aa16.3■□□□□ 0.2
CHRDL2-209ENST00000534276 TGFB2P61812 414 aa16.3■□□□□ 0.2
CHRDL2-209ENST00000534276 CCDC87Q9NVE4 849 aa16.3■□□□□ 0.2
CHRDL2-209ENST00000534276 PARP3Q9Y6F1 533 aa16.3■□□□□ 0.2
CHRDL2-209ENST00000534276 CICQ96RK0 1608 aaPredicted RBP16.3■□□□□ 0.2
CHRDL2-209ENST00000534276 C10orf71Q711Q0 1435 aa16.3■□□□□ 0.2
CHRDL2-209ENST00000534276 PXDNLA1KZ92 1463 aa16.3■□□□□ 0.2
CHRDL2-209ENST00000534276 CYP19A1P11511 503 aaPredicted RBP16.29■□□□□ 0.2
CHRDL2-209ENST00000534276 TJP1Q07157 1748 aa16.29■□□□□ 0.2
CHRDL2-209ENST00000534276 ADAMTS7Q9UKP4 1686 aa16.28■□□□□ 0.2
CHRDL2-209ENST00000534276 A0A0G2JLW4 131 aa16.28■□□□□ 0.2
CHRDL2-209ENST00000534276 GIGYF1O75420 1035 aaPredicted RBP16.28■□□□□ 0.2
CHRDL2-209ENST00000534276 FKBP8Q14318 412 aa16.28■□□□□ 0.2
CHRDL2-209ENST00000534276 GAS2L2Q8NHY3 880 aa16.28■□□□□ 0.2
CHRDL2-209ENST00000534276 SOS1Q07889 1333 aaPredicted RBP16.28■□□□□ 0.2
CHRDL2-209ENST00000534276 GOLGB1Q14789 3259 aaKnown RBP16.28■□□□□ 0.2
CHRDL2-209ENST00000534276 IL17REQ8NFR9 667 aa16.28■□□□□ 0.2
CHRDL2-209ENST00000534276 CFAP53Q96M91 514 aa16.28■□□□□ 0.2
CHRDL2-209ENST00000534276 ATP10DQ9P241 1426 aa16.28■□□□□ 0.2
CHRDL2-209ENST00000534276 KCPQ6ZWJ8 1503 aa16.27■□□□□ 0.2
CHRDL2-209ENST00000534276 GNAT3A8MTJ3 354 aa16.27■□□□□ 0.19
CHRDL2-209ENST00000534276 DPEP1P16444 411 aa16.27■□□□□ 0.19
CHRDL2-209ENST00000534276 DDR1Q08345 913 aa16.27■□□□□ 0.19
CHRDL2-209ENST00000534276 FAM9BQ8IZU0 186 aa16.27■□□□□ 0.19
CHRDL2-209ENST00000534276 VSIG10Q8N0Z9 540 aa16.27■□□□□ 0.19
CHRDL2-209ENST00000534276 C4AP0C0L4 1744 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms