RNA–Protein interactions for RNA: ENST00000534207.5

CHID1-223, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,171 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-223ENST00000534207 TEFQ10587 303 aa23.58■■□□□ 1.37
CHID1-223ENST00000534207 NEUROD2Q15784 382 aa23.58■■□□□ 1.37
CHID1-223ENST00000534207 MCM10Q7L590 875 aa23.58■■□□□ 1.37
CHID1-223ENST00000534207 EP400Q96L91 3159 aa23.56■■□□□ 1.36
CHID1-223ENST00000534207 WWC1Q8IX03 1113 aa23.56■■□□□ 1.36
CHID1-223ENST00000534207 ACSBG1Q96GR2 724 aa23.56■■□□□ 1.36
CHID1-223ENST00000534207 IL16Q14005 1332 aa23.56■■□□□ 1.36
CHID1-223ENST00000534207 WDR63Q8IWG1 891 aa23.55■■□□□ 1.36
CHID1-223ENST00000534207 ZNF521Q96K83 1311 aa23.55■■□□□ 1.36
CHID1-223ENST00000534207 KCNQ2O43526 872 aa23.54■■□□□ 1.36
CHID1-223ENST00000534207 TRIM37O94972 964 aa23.54■■□□□ 1.36
CHID1-223ENST00000534207 DCTN1Q14203 1278 aa23.54■■□□□ 1.36
CHID1-223ENST00000534207 TAF7Q15545 349 aaPredicted RBP23.54■■□□□ 1.36
CHID1-223ENST00000534207 NFATC2IPQ8NCF5 419 aa23.54■■□□□ 1.36
CHID1-223ENST00000534207 PIGBQ92521 554 aa23.54■■□□□ 1.36
CHID1-223ENST00000534207 SMARCC1Q92922 1105 aaPredicted RBP23.53■■□□□ 1.36
CHID1-223ENST00000534207 SYTL4Q96C24 671 aaPredicted RBP23.53■■□□□ 1.36
CHID1-223ENST00000534207 PLSCR1O15162 318 aa23.51■■□□□ 1.35
CHID1-223ENST00000534207 RREB1Q92766 1687 aa23.51■■□□□ 1.35
CHID1-223ENST00000534207 CFAP44Q96MT7 982 aa23.5■■□□□ 1.35
CHID1-223ENST00000534207 THUMPD2Q9BTF0 503 aaKnown RBP23.5■■□□□ 1.35
CHID1-223ENST00000534207 IFT57Q9NWB7 429 aa23.5■■□□□ 1.35
CHID1-223ENST00000534207 TAF1LQ8IZX4 1826 aa23.49■■□□□ 1.35
CHID1-223ENST00000534207 KCPQ6ZWJ8 1503 aa23.49■■□□□ 1.35
CHID1-223ENST00000534207 ZNF853P0CG23 659 aa23.49■■□□□ 1.35
CHID1-223ENST00000534207 GNAI1P63096 354 aa23.49■■□□□ 1.35
CHID1-223ENST00000534207 BTBD11A6QL63 1104 aa23.48■■□□□ 1.35
CHID1-223ENST00000534207 CHL1O00533 1208 aa23.48■■□□□ 1.35
CHID1-223ENST00000534207 HMGB2P26583 209 aaKnown RBP23.48■■□□□ 1.35
CHID1-223ENST00000534207 HNRNPUQ00839 825 aaKnown RBP eCLIP23.48■■□□□ 1.35
CHID1-223ENST00000534207 SF3B2Q13435 895 aaKnown RBP23.48■■□□□ 1.35
CHID1-223ENST00000534207 ZBED9Q6R2W3 1325 aa23.48■■□□□ 1.35
CHID1-223ENST00000534207 PTF1AQ7RTS3 328 aa23.47■■□□□ 1.35
CHID1-223ENST00000534207 ATG3Q9NT62 314 aa23.47■■□□□ 1.35
CHID1-223ENST00000534207 PALLDQ8WX93 1383 aa23.47■■□□□ 1.35
CHID1-223ENST00000534207 LAMB4A4D0S4 1761 aa23.47■■□□□ 1.35
CHID1-223ENST00000534207 COL5A3P25940 1745 aaPredicted RBP23.46■■□□□ 1.35
CHID1-223ENST00000534207 ZNF790Q6PG37 636 aa23.46■■□□□ 1.35
CHID1-223ENST00000534207 UPF1Q92900 1129 aaKnown RBP eCLIP23.46■■□□□ 1.352e-15■■■■■ 66.8
CHID1-223ENST00000534207 TJP1Q07157 1748 aa23.45■■□□□ 1.34
CHID1-223ENST00000534207 BAG6P46379 1132 aa23.45■■□□□ 1.34
CHID1-223ENST00000534207 TTC5Q8N0Z6 440 aa23.45■■□□□ 1.34
CHID1-223ENST00000534207 C5P01031 1676 aa23.44■■□□□ 1.34
CHID1-223ENST00000534207 APBA3O96018 575 aa23.44■■□□□ 1.34
CHID1-223ENST00000534207 ASAP1Q9ULH1 1129 aa23.44■■□□□ 1.34
CHID1-223ENST00000534207 GOLGA2Q08379 1002 aa23.43■■□□□ 1.34
CHID1-223ENST00000534207 VSIG10Q8N0Z9 540 aa23.43■■□□□ 1.34
CHID1-223ENST00000534207 TSPYL4Q9UJ04 414 aa23.43■■□□□ 1.34
CHID1-223ENST00000534207 SALL2Q9Y467 1007 aaPredicted RBP23.43■■□□□ 1.34
CHID1-223ENST00000534207 NUP188Q5SRE5 1749 aa23.42■■□□□ 1.34
CHID1-223ENST00000534207 HEG1Q9ULI3 1381 aa23.41■■□□□ 1.34
CHID1-223ENST00000534207 SLC27A3Q5K4L6 730 aa23.41■■□□□ 1.34
CHID1-223ENST00000534207 E9PSI1 815 aa23.4■■□□□ 1.34
CHID1-223ENST00000534207 SLC39A6Q13433 755 aa23.4■■□□□ 1.34
CHID1-223ENST00000534207 FMNL2Q96PY5 1086 aa23.4■■□□□ 1.34
CHID1-223ENST00000534207 MYH16Q9H6N6 1097 aa23.4■■□□□ 1.34
CHID1-223ENST00000534207 SENP3-EIF4A1A0A087X0R7 540 aa23.39■■□□□ 1.33
CHID1-223ENST00000534207 CAMKK2Q96RR4 588 aa23.39■■□□□ 1.33
CHID1-223ENST00000534207 MBIPQ9NS73 344 aa23.39■■□□□ 1.33
CHID1-223ENST00000534207 SOS1Q07889 1333 aaPredicted RBP23.38■■□□□ 1.33
CHID1-223ENST00000534207 CACNA1FO60840 1977 aa23.38■■□□□ 1.33
CHID1-223ENST00000534207 LOC102724428A0A0B4J2F2 783 aa23.38■■□□□ 1.33
CHID1-223ENST00000534207 SIK1P57059 783 aa23.38■■□□□ 1.33
CHID1-223ENST00000534207 EIF4A1P60842 406 aaKnown RBP23.38■■□□□ 1.33
CHID1-223ENST00000534207 ZNF496Q96IT1 587 aaPredicted RBP23.37■■□□□ 1.33
CHID1-223ENST00000534207 QSER1Q2KHR3 1735 aa23.36■■□□□ 1.33
CHID1-223ENST00000534207 HOXB7P09629 217 aa23.36■■□□□ 1.33
CHID1-223ENST00000534207 SLFN5Q08AF3 891 aa23.36■■□□□ 1.33
CHID1-223ENST00000534207 TXNRD1Q16881 649 aa23.36■■□□□ 1.33
CHID1-223ENST00000534207 TRMT2AQ8IZ69 625 aaKnown RBP23.36■■□□□ 1.33
CHID1-223ENST00000534207 TEX13AQ9BXU3 409 aaPredicted RBP23.36■■□□□ 1.33
CHID1-223ENST00000534207 MIS18AQ9NYP9 233 aa23.36■■□□□ 1.33
CHID1-223ENST00000534207 LAS1LQ9Y4W2 734 aaKnown RBP23.36■■□□□ 1.33
CHID1-223ENST00000534207 FANCIQ9NVI1 1328 aa23.35■■□□□ 1.33
CHID1-223ENST00000534207 KCNQ3O43525 872 aa23.35■■□□□ 1.33
CHID1-223ENST00000534207 C4BP0C0L5 1744 aa23.35■■□□□ 1.33
CHID1-223ENST00000534207 CCNL1Q9UK58 526 aaPredicted RBP23.34■■□□□ 1.33
CHID1-223ENST00000534207 PTCD1O75127 700 aaKnown RBP23.33■■□□□ 1.33
CHID1-223ENST00000534207 SNRPA1P09661 255 aaKnown RBP23.33■■□□□ 1.33
CHID1-223ENST00000534207 PROM2Q8N271 834 aa23.33■■□□□ 1.33
CHID1-223ENST00000534207 SLC4A9Q96Q91 983 aa23.33■■□□□ 1.33
CHID1-223ENST00000534207 RBM42Q9BTD8 480 aaKnown RBP23.33■■□□□ 1.33
CHID1-223ENST00000534207 SPINK5Q9NQ38 1064 aaPredicted RBP23.33■■□□□ 1.33
CHID1-223ENST00000534207 MYH14Q7Z406 1995 aaKnown RBP23.32■■□□□ 1.32
CHID1-223ENST00000534207 GIGYF1O75420 1035 aaPredicted RBP23.32■■□□□ 1.32
CHID1-223ENST00000534207 ATP6V1AP38606 617 aa23.32■■□□□ 1.32
CHID1-223ENST00000534207 EN1Q05925 392 aaPredicted RBP23.32■■□□□ 1.32
CHID1-223ENST00000534207 CHMP4AQ9BY43 222 aa23.32■■□□□ 1.32
CHID1-223ENST00000534207 UBR3Q6ZT12 1888 aa23.31■■□□□ 1.32
CHID1-223ENST00000534207 EZH2Q15910 746 aaKnown RBP23.3■■□□□ 1.32
CHID1-223ENST00000534207 DEFB132Q7Z7B7 95 aa23.3■■□□□ 1.32
CHID1-223ENST00000534207 TSR2Q969E8 191 aaKnown RBP23.3■■□□□ 1.32
CHID1-223ENST00000534207 LRRC4BQ9NT99 713 aa23.29■■□□□ 1.32
CHID1-223ENST00000534207 CNTNAP4Q9C0A0 1308 aa23.29■■□□□ 1.32
CHID1-223ENST00000534207 TUBGCP6Q96RT7 1819 aa23.29■■□□□ 1.32
CHID1-223ENST00000534207 ITPK1Q13572 414 aa23.28■■□□□ 1.32
CHID1-223ENST00000534207 RC3H1Q5TC82 1133 aaKnown RBP23.28■■□□□ 1.32
CHID1-223ENST00000534207 DUSP27Q5VZP5 1158 aa23.28■■□□□ 1.32
CHID1-223ENST00000534207 CDCA7LQ96GN5 454 aa23.28■■□□□ 1.32
CHID1-223ENST00000534207 ERBB4Q15303 1308 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms