RNA–Protein interactions for RNA: ENST00000534171.5

ALKBH3-212, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 5

Gene ALKBH3, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-212ENST00000534171 ITPK1Q13572 414 aa20.41■□□□□ 0.86
ALKBH3-212ENST00000534171 PELP1Q8IZL8 1130 aaKnown RBP20.41■□□□□ 0.86
ALKBH3-212ENST00000534171 PHF14O94880 888 aa20.4■□□□□ 0.86
ALKBH3-212ENST00000534171 ATP6V1AP38606 617 aa20.4■□□□□ 0.86
ALKBH3-212ENST00000534171 AMER1Q5JTC6 1135 aaPredicted RBP20.4■□□□□ 0.86
ALKBH3-212ENST00000534171 ZNF530Q6P9A1 599 aaPredicted RBP20.39■□□□□ 0.85
ALKBH3-212ENST00000534171 KIF7Q2M1P5 1343 aa20.38■□□□□ 0.85
ALKBH3-212ENST00000534171 GRIN3BO60391 1043 aa20.38■□□□□ 0.85
ALKBH3-212ENST00000534171 SMIM5Q71RC9 77 aa20.38■□□□□ 0.85
ALKBH3-212ENST00000534171 AEBP1Q8IUX7 1158 aa20.38■□□□□ 0.85
ALKBH3-212ENST00000534171 KDRP35968 1356 aa20.37■□□□□ 0.85
ALKBH3-212ENST00000534171 GNPATO15228 680 aa20.37■□□□□ 0.85
ALKBH3-212ENST00000534171 YBX3P16989 372 aaKnown RBP eCLIP20.37■□□□□ 0.851e-6■■■■□ 20.7
ALKBH3-212ENST00000534171 IL13P35225 146 aa20.37■□□□□ 0.85
ALKBH3-212ENST00000534171 KDM6AO15550 1401 aaPredicted RBP20.36■□□□□ 0.85
ALKBH3-212ENST00000534171 ZNF831Q5JPB2 1677 aa20.36■□□□□ 0.85
ALKBH3-212ENST00000534171 SULT6B1Q6IMI4 303 aa20.36■□□□□ 0.85
ALKBH3-212ENST00000534171 MTHFSP49914 203 aa20.35■□□□□ 0.85
ALKBH3-212ENST00000534171 CABP4P57796 275 aa20.35■□□□□ 0.85
ALKBH3-212ENST00000534171 C1orf141Q5JVX7 400 aa20.35■□□□□ 0.85
ALKBH3-212ENST00000534171 IFFO2Q5TF58 517 aa20.35■□□□□ 0.85
ALKBH3-212ENST00000534171 SLC4A9Q96Q91 983 aa20.34■□□□□ 0.85
ALKBH3-212ENST00000534171 RC3H1Q5TC82 1133 aaKnown RBP20.33■□□□□ 0.85
ALKBH3-212ENST00000534171 RBM42Q9BTD8 480 aaKnown RBP20.33■□□□□ 0.85
ALKBH3-212ENST00000534171 PER1O15534 1290 aaPredicted RBP20.32■□□□□ 0.84
ALKBH3-212ENST00000534171 RTCBQ9Y3I0 505 aaKnown RBP20.32■□□□□ 0.84
ALKBH3-212ENST00000534171 TRAPPC3LQ5T215 181 aa20.31■□□□□ 0.84
ALKBH3-212ENST00000534171 CNTNAP4Q9C0A0 1308 aa20.3■□□□□ 0.84
ALKBH3-212ENST00000534171 ADRA2BP18089 450 aa20.3■□□□□ 0.84
ALKBH3-212ENST00000534171 COL5A3P25940 1745 aaPredicted RBP20.3■□□□□ 0.84
ALKBH3-212ENST00000534171 NFATC2IPQ8NCF5 419 aa20.29■□□□□ 0.84
ALKBH3-212ENST00000534171 MYH14Q7Z406 1995 aaKnown RBP20.28■□□□□ 0.84
ALKBH3-212ENST00000534171 RPS6KA4O75676 772 aa20.28■□□□□ 0.84
ALKBH3-212ENST00000534171 AKAP4Q5JQC9 854 aa20.28■□□□□ 0.84
ALKBH3-212ENST00000534171 SCN11AQ9UI33 1791 aa20.27■□□□□ 0.84
ALKBH3-212ENST00000534171 PTCD1O75127 700 aaKnown RBP20.27■□□□□ 0.84
ALKBH3-212ENST00000534171 MMP10P09238 476 aa20.27■□□□□ 0.84
ALKBH3-212ENST00000534171 NLGN1Q8N2Q7 840 aa20.27■□□□□ 0.84
ALKBH3-212ENST00000534171 ARHGEF1Q92888 912 aaKnown RBP20.27■□□□□ 0.84
ALKBH3-212ENST00000534171 NPC1L1Q9UHC9 1359 aa20.25■□□□□ 0.83
ALKBH3-212ENST00000534171 C1QTNF8P60827 252 aa20.25■□□□□ 0.83
ALKBH3-212ENST00000534171 CC2D1BQ5T0F9 858 aaKnown RBP20.25■□□□□ 0.83
ALKBH3-212ENST00000534171 DIAPH1O60610 1272 aaKnown RBP20.24■□□□□ 0.83
ALKBH3-212ENST00000534171 RFC4P35249 363 aa20.24■□□□□ 0.83
ALKBH3-212ENST00000534171 HMOX1P09601 288 aa20.23■□□□□ 0.83
ALKBH3-212ENST00000534171 GYS1P13807 737 aa20.23■□□□□ 0.83
ALKBH3-212ENST00000534171 CRKLP46109 303 aaKnown RBP20.23■□□□□ 0.83
ALKBH3-212ENST00000534171 SLC52A2Q9HAB3 445 aa20.23■□□□□ 0.83
ALKBH3-212ENST00000534171 KIF13BQ9NQT8 1826 aa20.23■□□□□ 0.83
ALKBH3-212ENST00000534171 SENP3-EIF4A1A0A087X0R7 540 aa20.22■□□□□ 0.83
ALKBH3-212ENST00000534171 CICQ96RK0 1608 aaPredicted RBP20.22■□□□□ 0.83
ALKBH3-212ENST00000534171 GIGYF1O75420 1035 aaPredicted RBP20.21■□□□□ 0.83
ALKBH3-212ENST00000534171 LGR6Q9HBX8 967 aa20.21■□□□□ 0.83
ALKBH3-212ENST00000534171 MRC1P22897 1456 aa20.2■□□□□ 0.82
ALKBH3-212ENST00000534171 C4AP0C0L4 1744 aa20.2■□□□□ 0.82
ALKBH3-212ENST00000534171 RNMTO43148 476 aaKnown RBP20.2■□□□□ 0.82
ALKBH3-212ENST00000534171 TGFB2P61812 414 aa20.2■□□□□ 0.82
ALKBH3-212ENST00000534171 CEP350Q5VT06 3117 aa20.2■□□□□ 0.82
ALKBH3-212ENST00000534171 TJP1Q07157 1748 aa20.19■□□□□ 0.82
ALKBH3-212ENST00000534171 MTHFSDQ2M296 383 aaKnown RBP20.19■□□□□ 0.82
ALKBH3-212ENST00000534171 C10orf71Q711Q0 1435 aa20.19■□□□□ 0.82
ALKBH3-212ENST00000534171 PXDNLA1KZ92 1463 aa20.18■□□□□ 0.82
ALKBH3-212ENST00000534171 VIRMAQ69YN4 1812 aaKnown RBP20.18■□□□□ 0.82
ALKBH3-212ENST00000534171 INTS5Q6P9B9 1019 aaKnown RBP20.18■□□□□ 0.82
ALKBH3-212ENST00000534171 CCDC87Q9NVE4 849 aa20.18■□□□□ 0.82
ALKBH3-212ENST00000534171 WWC3Q9ULE0 1092 aa20.18■□□□□ 0.82
ALKBH3-212ENST00000534171 PARP3Q9Y6F1 533 aa20.18■□□□□ 0.82
ALKBH3-212ENST00000534171 ADCY9O60503 1353 aa20.18■□□□□ 0.82
ALKBH3-212ENST00000534171 ATP10DQ9P241 1426 aa20.18■□□□□ 0.82
ALKBH3-212ENST00000534171 ADAMTS7Q9UKP4 1686 aa20.17■□□□□ 0.82
ALKBH3-212ENST00000534171 COL3A1P02461 1466 aaPredicted RBP20.17■□□□□ 0.82
ALKBH3-212ENST00000534171 KIAA1551Q9HCM1 1747 aa20.16■□□□□ 0.82
ALKBH3-212ENST00000534171 USP42Q9H9J4 1324 aaKnown RBP20.16■□□□□ 0.82
ALKBH3-212ENST00000534171 DNAJC10Q8IXB1 793 aa20.15■□□□□ 0.82
ALKBH3-212ENST00000534171 SRP68Q9UHB9 627 aaKnown RBP20.15■□□□□ 0.82
ALKBH3-212ENST00000534171 N4BP2Q86UW6 1770 aaPredicted RBP20.14■□□□□ 0.81
ALKBH3-212ENST00000534171 A0A0G2JLW4 131 aa20.14■□□□□ 0.81
ALKBH3-212ENST00000534171 SLC39A6Q13433 755 aa20.14■□□□□ 0.81
ALKBH3-212ENST00000534171 FKBP8Q14318 412 aa20.14■□□□□ 0.81
ALKBH3-212ENST00000534171 CYP19A1P11511 503 aaPredicted RBP20.13■□□□□ 0.81
ALKBH3-212ENST00000534171 VSIG10Q8N0Z9 540 aa20.13■□□□□ 0.81
ALKBH3-212ENST00000534171 GPBP1L1Q9HC44 474 aaPredicted RBP20.13■□□□□ 0.81
ALKBH3-212ENST00000534171 KCPQ6ZWJ8 1503 aa20.12■□□□□ 0.81
ALKBH3-212ENST00000534171 SOS1Q07889 1333 aaPredicted RBP20.12■□□□□ 0.81
ALKBH3-212ENST00000534171 U2SURPO15042 1029 aaKnown RBP20.12■□□□□ 0.81
ALKBH3-212ENST00000534171 DPEP1P16444 411 aa20.12■□□□□ 0.81
ALKBH3-212ENST00000534171 CNGB1Q14028 1251 aaPredicted RBP20.12■□□□□ 0.81
ALKBH3-212ENST00000534171 BCS1LQ9Y276 419 aa20.11■□□□□ 0.81
ALKBH3-212ENST00000534171 ZPR1O75312 459 aa20.1■□□□□ 0.81
ALKBH3-212ENST00000534171 DDR1Q08345 913 aa20.1■□□□□ 0.81
ALKBH3-212ENST00000534171 GAS2L2Q8NHY3 880 aa20.1■□□□□ 0.81
ALKBH3-212ENST00000534171 BRCA1P38398 1863 aaKnown RBP20.09■□□□□ 0.81
ALKBH3-212ENST00000534171 UBR2Q8IWV8 1755 aa20.09■□□□□ 0.81
ALKBH3-212ENST00000534171 GNAT3A8MTJ3 354 aa20.09■□□□□ 0.81
ALKBH3-212ENST00000534171 TM4SF1P30408 202 aa20.09■□□□□ 0.81
ALKBH3-212ENST00000534171 POLRMTO00411 1230 aaKnown RBP20.08■□□□□ 0.81
ALKBH3-212ENST00000534171 KCNA3P22001 575 aa20.08■□□□□ 0.81
ALKBH3-212ENST00000534171 IL17REQ8NFR9 667 aa20.08■□□□□ 0.81
ALKBH3-212ENST00000534171 FCHSD2O94868 740 aa20.07■□□□□ 0.8
ALKBH3-212ENST00000534171 USPL1Q5W0Q7 1092 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms