RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 MMP10P09238 476 aa20.72■□□□□ 0.91
CTSB-230ENST00000534149 ATG3Q9NT62 314 aa20.72■□□□□ 0.91
CTSB-230ENST00000534149 KIAA1551Q9HCM1 1747 aa20.72■□□□□ 0.91
CTSB-230ENST00000534149 N4BP2Q86UW6 1770 aaPredicted RBP20.72■□□□□ 0.91
CTSB-230ENST00000534149 PXDNLA1KZ92 1463 aa20.71■□□□□ 0.91
CTSB-230ENST00000534149 POLKQ9UBT6 870 aa20.71■□□□□ 0.91
CTSB-230ENST00000534149 KDRP35968 1356 aa20.7■□□□□ 0.9
CTSB-230ENST00000534149 KIF3CO14782 793 aa20.69■□□□□ 0.9
CTSB-230ENST00000534149 EIF4A2Q14240 407 aaKnown RBP20.68■□□□□ 0.9
CTSB-230ENST00000534149 TNNT2P45379 298 aaPredicted RBP20.67■□□□□ 0.9
CTSB-230ENST00000534149 SLC4A9Q96Q91 983 aa20.67■□□□□ 0.9
CTSB-230ENST00000534149 RTCBQ9Y3I0 505 aaKnown RBP20.67■□□□□ 0.9
CTSB-230ENST00000534149 TRAPPC3LQ5T215 181 aa20.66■□□□□ 0.9
CTSB-230ENST00000534149 RBM42Q9BTD8 480 aaKnown RBP20.66■□□□□ 0.9
CTSB-230ENST00000534149 BCS1LQ9Y276 419 aa20.66■□□□□ 0.9
CTSB-230ENST00000534149 C10orf71Q711Q0 1435 aa20.66■□□□□ 0.9
CTSB-230ENST00000534149 COL5A3P25940 1745 aaPredicted RBP20.66■□□□□ 0.9
CTSB-230ENST00000534149 ZNF831Q5JPB2 1677 aa20.65■□□□□ 0.9
CTSB-230ENST00000534149 A0A0G2JLW4 131 aa20.65■□□□□ 0.9
CTSB-230ENST00000534149 TGFB2P61812 414 aa20.64■□□□□ 0.89
CTSB-230ENST00000534149 C4AP0C0L4 1744 aa20.64■□□□□ 0.89
CTSB-230ENST00000534149 NLGN1Q8N2Q7 840 aa20.63■□□□□ 0.89
CTSB-230ENST00000534149 ARHGEF1Q92888 912 aaKnown RBP20.63■□□□□ 0.89
CTSB-230ENST00000534149 POLR3GLQ9BT43 218 aa20.63■□□□□ 0.89
CTSB-230ENST00000534149 PLEKHG2Q9H7P9 1386 aa20.62■□□□□ 0.89
CTSB-230ENST00000534149 ERVV-2B6SEH9 535 aa20.62■□□□□ 0.89
CTSB-230ENST00000534149 MYH14Q7Z406 1995 aaKnown RBP20.62■□□□□ 0.89
CTSB-230ENST00000534149 BRCA1P38398 1863 aaKnown RBP20.62■□□□□ 0.89
CTSB-230ENST00000534149 CNTNAP4Q9C0A0 1308 aa20.61■□□□□ 0.89
CTSB-230ENST00000534149 GYS1P13807 737 aa20.61■□□□□ 0.89
CTSB-230ENST00000534149 DPEP1P16444 411 aa20.61■□□□□ 0.89
CTSB-230ENST00000534149 ADRA2BP18089 450 aa20.61■□□□□ 0.89
CTSB-230ENST00000534149 RC3H1Q5TC82 1133 aaKnown RBP20.61■□□□□ 0.89
CTSB-230ENST00000534149 CCDC87Q9NVE4 849 aa20.61■□□□□ 0.89
CTSB-230ENST00000534149 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
CTSB-230ENST00000534149 RFC4P35249 363 aa20.6■□□□□ 0.89
CTSB-230ENST00000534149 ARHGAP27Q6ZUM4 889 aa20.6■□□□□ 0.89
CTSB-230ENST00000534149 DCAF5Q96JK2 942 aa20.6■□□□□ 0.89
CTSB-230ENST00000534149 RPS6KA4O75676 772 aa20.59■□□□□ 0.89
CTSB-230ENST00000534149 FCHSD2O94868 740 aa20.59■□□□□ 0.89
CTSB-230ENST00000534149 HSP90AB1P08238 724 aaKnown RBP20.59■□□□□ 0.89
CTSB-230ENST00000534149 ZNF530Q6P9A1 599 aaPredicted RBP20.59■□□□□ 0.89
CTSB-230ENST00000534149 PLEKHO1Q53GL0 409 aaPredicted RBP20.58■□□□□ 0.89
CTSB-230ENST00000534149 PARP3Q9Y6F1 533 aa20.58■□□□□ 0.89
CTSB-230ENST00000534149 TOMM70O94826 608 aa20.57■□□□□ 0.88
CTSB-230ENST00000534149 APLP1P51693 650 aa20.57■□□□□ 0.88
CTSB-230ENST00000534149 CABP4P57796 275 aa20.57■□□□□ 0.88
CTSB-230ENST00000534149 NMRK2Q9NPI5 230 aa20.57■□□□□ 0.88
CTSB-230ENST00000534149 ARFGEF1Q9Y6D6 1849 aa20.56■□□□□ 0.88
CTSB-230ENST00000534149 PTCD1O75127 700 aaKnown RBP20.55■□□□□ 0.88
CTSB-230ENST00000534149 KCNA3P22001 575 aa20.54■□□□□ 0.88
CTSB-230ENST00000534149 AMOTQ4VCS5 1084 aa20.54■□□□□ 0.88
CTSB-230ENST00000534149 AEBP1Q8IUX7 1158 aa20.54■□□□□ 0.88
CTSB-230ENST00000534149 SRP68Q9UHB9 627 aaKnown RBP20.54■□□□□ 0.88
CTSB-230ENST00000534149 TJP1Q07157 1748 aa20.53■□□□□ 0.88
CTSB-230ENST00000534149 CRKLP46109 303 aaKnown RBP20.53■□□□□ 0.88
CTSB-230ENST00000534149 MTHFSP49914 203 aa20.53■□□□□ 0.88
CTSB-230ENST00000534149 C9orf131Q5VYM1 1079 aa20.53■□□□□ 0.88
CTSB-230ENST00000534149 C1orf141Q5JVX7 400 aa20.52■□□□□ 0.88
CTSB-230ENST00000534149 DDR1Q08345 913 aa20.51■□□□□ 0.87
CTSB-230ENST00000534149 FKBP8Q14318 412 aa20.51■□□□□ 0.87
CTSB-230ENST00000534149 DNAJC5GQ8N7S2 189 aa20.51■□□□□ 0.87
CTSB-230ENST00000534149 NFATC2IPQ8NCF5 419 aa20.51■□□□□ 0.87
CTSB-230ENST00000534149 PIM2Q9P1W9 311 aa20.51■□□□□ 0.87
CTSB-230ENST00000534149 USP42Q9H9J4 1324 aaKnown RBP20.51■□□□□ 0.87
CTSB-230ENST00000534149 WDR90Q96KV7 1748 aa20.5■□□□□ 0.87
CTSB-230ENST00000534149 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
CTSB-230ENST00000534149 PANK3Q9H999 370 aa20.5■□□□□ 0.87
CTSB-230ENST00000534149 TIMELESSQ9UNS1 1208 aa20.5■□□□□ 0.87
CTSB-230ENST00000534149 SCN11AQ9UI33 1791 aa20.49■□□□□ 0.87
CTSB-230ENST00000534149 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
CTSB-230ENST00000534149 KCPQ6ZWJ8 1503 aa20.48■□□□□ 0.87
CTSB-230ENST00000534149 DALRD3Q5D0E6 543 aaKnown RBP20.48■□□□□ 0.87
CTSB-230ENST00000534149 RBM46Q8TBY0 533 aaKnown RBP20.48■□□□□ 0.87
CTSB-230ENST00000534149 CHRNA5P30532 468 aa20.47■□□□□ 0.87
CTSB-230ENST00000534149 SULT6B1Q6IMI4 303 aa20.47■□□□□ 0.87
CTSB-230ENST00000534149 C16orf71Q8IYS4 520 aaPredicted RBP20.47■□□□□ 0.87
CTSB-230ENST00000534149 SBF1O95248 1867 aa20.46■□□□□ 0.87
CTSB-230ENST00000534149 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
CTSB-230ENST00000534149 RNF181Q9P0P0 153 aa20.46■□□□□ 0.87
CTSB-230ENST00000534149 POLRMTO00411 1230 aaKnown RBP20.45■□□□□ 0.86
CTSB-230ENST00000534149 HTRA3P83110 453 aa20.45■□□□□ 0.86
CTSB-230ENST00000534149 INTS5Q6P9B9 1019 aaKnown RBP20.45■□□□□ 0.86
CTSB-230ENST00000534149 HSPA5P11021 654 aaKnown RBP20.44■□□□□ 0.86
CTSB-230ENST00000534149 KDM2BQ8NHM5 1336 aa20.44■□□□□ 0.86
CTSB-230ENST00000534149 EIF4G2P78344 907 aaKnown RBP eCLIP20.43■□□□□ 0.86
CTSB-230ENST00000534149 DNAJC10Q8IXB1 793 aa20.43■□□□□ 0.86
CTSB-230ENST00000534149 TNRC6CQ9HCJ0 1690 aaKnown RBP20.42■□□□□ 0.86
CTSB-230ENST00000534149 AFDNP55196 1824 aaKnown RBP20.42■□□□□ 0.86
CTSB-230ENST00000534149 TM4SF1P30408 202 aa20.42■□□□□ 0.86
CTSB-230ENST00000534149 IL13P35225 146 aa20.42■□□□□ 0.86
CTSB-230ENST00000534149 USPL1Q5W0Q7 1092 aa20.42■□□□□ 0.86
CTSB-230ENST00000534149 VIRMAQ69YN4 1812 aaKnown RBP20.41■□□□□ 0.86
CTSB-230ENST00000534149 ZPR1O75312 459 aa20.41■□□□□ 0.86
CTSB-230ENST00000534149 FSTL1Q12841 308 aa20.41■□□□□ 0.86
CTSB-230ENST00000534149 RRAGCQ9HB90 399 aa20.41■□□□□ 0.86
CTSB-230ENST00000534149 SOS1Q07889 1333 aaPredicted RBP20.41■□□□□ 0.86
CTSB-230ENST00000534149 RASSF7Q02833 373 aa20.4■□□□□ 0.86
CTSB-230ENST00000534149 AKAP4Q5JQC9 854 aa20.4■□□□□ 0.86
CTSB-230ENST00000534149 KLRG1Q96E93 195 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms