RNA–Protein interactions for RNA: ENST00000534103.5

RAB30-213, Transcript of RAB30, member RAS oncogene family, human

TSL 4

Gene RAB30, Length 673 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB30-213	ENST00000534103	ASAP1	Q9ULH1	1129 aa		11.91	□□□□□ -0.5
RAB30-213	ENST00000534103	PPP2R1A	P30153	589 aa		11.9	□□□□□ -0.5
RAB30-213	ENST00000534103	ATP6V1A	P38606	617 aa		11.9	□□□□□ -0.5
RAB30-213	ENST00000534103	GAS2L2	Q8NHY3	880 aa		11.9	□□□□□ -0.5
RAB30-213	ENST00000534103	ARX	Q96QS3	562 aa		11.9	□□□□□ -0.5
RAB30-213	ENST00000534103	RBM42	Q9BTD8	480 aa	Known RBP	11.9	□□□□□ -0.5
RAB30-213	ENST00000534103	ZNF831	Q5JPB2	1677 aa		11.9	□□□□□ -0.5
RAB30-213	ENST00000534103	NEFM	P07197	916 aa		11.89	□□□□□ -0.51
RAB30-213	ENST00000534103	ZEB1	P37275	1124 aa	Predicted RBP	11.89	□□□□□ -0.51
RAB30-213	ENST00000534103	PTGER2	P43116	358 aa		11.89	□□□□□ -0.51
RAB30-213	ENST00000534103	ATG3	Q9NT62	314 aa		11.89	□□□□□ -0.51
RAB30-213	ENST00000534103	KLHL34	Q8N239	644 aa		11.88	□□□□□ -0.51
RAB30-213	ENST00000534103	COL24A1	Q17RW2	1714 aa		11.88	□□□□□ -0.51
RAB30-213	ENST00000534103	COL5A3	P25940	1745 aa	Predicted RBP	11.87	□□□□□ -0.51
RAB30-213	ENST00000534103	GNPAT	O15228	680 aa		11.87	□□□□□ -0.51
RAB30-213	ENST00000534103	PHF14	O94880	888 aa		11.87	□□□□□ -0.51
RAB30-213	ENST00000534103	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.87	□□□□□ -0.51
RAB30-213	ENST00000534103	SSFA2	P28290	1259 aa		11.87	□□□□□ -0.51
RAB30-213	ENST00000534103	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
RAB30-213	ENST00000534103	MTHFSD	Q2M296	383 aa	Known RBP	11.87	□□□□□ -0.51
RAB30-213	ENST00000534103	NFATC2IP	Q8NCF5	419 aa		11.87	□□□□□ -0.51
RAB30-213	ENST00000534103	LINC00116	Q8NCU8	138 aa		11.87	□□□□□ -0.51
RAB30-213	ENST00000534103	MAP3K5	Q99683	1374 aa		11.87	□□□□□ -0.51
RAB30-213	ENST00000534103	MRC1	P22897	1456 aa		11.87	□□□□□ -0.51
RAB30-213	ENST00000534103	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.86	□□□□□ -0.51
RAB30-213	ENST00000534103	PRKAR2B	P31323	418 aa		11.86	□□□□□ -0.51
RAB30-213	ENST00000534103	COL23A1	Q86Y22	540 aa	Predicted RBP	11.86	□□□□□ -0.51
RAB30-213	ENST00000534103	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.86	□□□□□ -0.51
RAB30-213	ENST00000534103	SLC52A2	Q9HAB3	445 aa		11.86	□□□□□ -0.51
RAB30-213	ENST00000534103	ADAMTS7	Q9UKP4	1686 aa		11.85	□□□□□ -0.51
RAB30-213	ENST00000534103	GNAT3	A8MTJ3	354 aa		11.85	□□□□□ -0.51
RAB30-213	ENST00000534103	RNMT	O43148	476 aa	Known RBP	11.85	□□□□□ -0.51
RAB30-213	ENST00000534103	PTCD1	O75127	700 aa	Known RBP	11.85	□□□□□ -0.51
RAB30-213	ENST00000534103	TEF	Q10587	303 aa		11.85	□□□□□ -0.51
RAB30-213	ENST00000534103	SGIP1	Q9BQI5	828 aa		11.85	□□□□□ -0.51
RAB30-213	ENST00000534103	RTCB	Q9Y3I0	505 aa	Known RBP	11.85	□□□□□ -0.51
RAB30-213	ENST00000534103	ITPK1	Q13572	414 aa		11.84	□□□□□ -0.51
RAB30-213	ENST00000534103	RALBP1	Q15311	655 aa		11.84	□□□□□ -0.51
RAB30-213	ENST00000534103	MSL1	Q68DK7	614 aa		11.84	□□□□□ -0.51
RAB30-213	ENST00000534103	TTC5	Q8N0Z6	440 aa		11.84	□□□□□ -0.51
RAB30-213	ENST00000534103	CIC	Q96RK0	1608 aa	Predicted RBP	11.84	□□□□□ -0.51
RAB30-213	ENST00000534103	CNTNAP4	Q9C0A0	1308 aa		11.84	□□□□□ -0.51
RAB30-213	ENST00000534103	TJP1	Q07157	1748 aa		11.83	□□□□□ -0.52
RAB30-213	ENST00000534103	FCHSD2	O94868	740 aa		11.83	□□□□□ -0.52
RAB30-213	ENST00000534103	ADRA2B	P18089	450 aa		11.83	□□□□□ -0.52
RAB30-213	ENST00000534103	DDX10	Q13206	875 aa	Known RBP	11.83	□□□□□ -0.52
RAB30-213	ENST00000534103	RC3H1	Q5TC82	1133 aa	Known RBP	11.83	□□□□□ -0.52
RAB30-213	ENST00000534103	RTF1	Q92541	710 aa	Known RBP	11.83	□□□□□ -0.52
RAB30-213	ENST00000534103	SYT17	Q9BSW7	474 aa		11.83	□□□□□ -0.52
RAB30-213	ENST00000534103	RSPH6A	Q9H0K4	717 aa		11.83	□□□□□ -0.52
RAB30-213	ENST00000534103	PNN	Q9H307	717 aa	Known RBP	11.83	□□□□□ -0.52
RAB30-213	ENST00000534103	MYH14	Q7Z406	1995 aa	Known RBP	11.83	□□□□□ -0.52
RAB30-213	ENST00000534103	TRAPPC3L	Q5T215	181 aa		11.82	□□□□□ -0.52
RAB30-213	ENST00000534103	LGR6	Q9HBX8	967 aa		11.82	□□□□□ -0.52
RAB30-213	ENST00000534103	SIPA1L3	O60292	1781 aa	Predicted RBP	11.82	□□□□□ -0.52
RAB30-213	ENST00000534103	UBR2	Q8IWV8	1755 aa		11.82	□□□□□ -0.52
RAB30-213	ENST00000534103	CHD4	Q14839	1912 aa		11.82	□□□□□ -0.52
RAB30-213	ENST00000534103	RFC4	P35249	363 aa		11.81	□□□□□ -0.52
RAB30-213	ENST00000534103	MAPK8IP3	Q9UPT6	1336 aa		11.81	□□□□□ -0.52
RAB30-213	ENST00000534103	C4A	P0C0L4	1744 aa		11.8	□□□□□ -0.52
RAB30-213	ENST00000534103	CRKL	P46109	303 aa	Known RBP	11.8	□□□□□ -0.52
RAB30-213	ENST00000534103	SLC4A9	Q96Q91	983 aa		11.8	□□□□□ -0.52
RAB30-213	ENST00000534103	DLG5	Q8TDM6	1919 aa		11.8	□□□□□ -0.52
RAB30-213	ENST00000534103	RPS6KA4	O75676	772 aa		11.79	□□□□□ -0.52
RAB30-213	ENST00000534103	SLC39A6	Q13433	755 aa		11.79	□□□□□ -0.52
RAB30-213	ENST00000534103	GPR162	Q16538	588 aa		11.79	□□□□□ -0.52
RAB30-213	ENST00000534103	PELP1	Q8IZL8	1130 aa	Known RBP	11.79	□□□□□ -0.52
RAB30-213	ENST00000534103	VSIG10	Q8N0Z9	540 aa		11.79	□□□□□ -0.52
RAB30-213	ENST00000534103	PHACTR3	Q96KR7	559 aa		11.79	□□□□□ -0.52
RAB30-213	ENST00000534103	KCP	Q6ZWJ8	1503 aa		11.79	□□□□□ -0.52
RAB30-213	ENST00000534103	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.79	□□□□□ -0.52
RAB30-213	ENST00000534103	STARD3NL	O95772	234 aa		11.78	□□□□□ -0.52
RAB30-213	ENST00000534103	NPM2	Q86SE8	214 aa	Known RBP	11.78	□□□□□ -0.52
RAB30-213	ENST00000534103	AMIGO3	Q86WK7	504 aa		11.78	□□□□□ -0.52
RAB30-213	ENST00000534103	DNAJC10	Q8IXB1	793 aa		11.78	□□□□□ -0.52
RAB30-213	ENST00000534103	NLGN1	Q8N2Q7	840 aa		11.78	□□□□□ -0.52
RAB30-213	ENST00000534103	CCDC87	Q9NVE4	849 aa		11.78	□□□□□ -0.52
RAB30-213	ENST00000534103	BTBD11	A6QL63	1104 aa		11.77	□□□□□ -0.53
RAB30-213	ENST00000534103	HTATSF1	O43719	755 aa	Known RBP	11.77	□□□□□ -0.53
RAB30-213	ENST00000534103	SMIM5	Q71RC9	77 aa		11.77	□□□□□ -0.53
RAB30-213	ENST00000534103	IL17RE	Q8NFR9	667 aa		11.77	□□□□□ -0.53
RAB30-213	ENST00000534103	FMNL2	Q96PY5	1086 aa		11.77	□□□□□ -0.53
RAB30-213	ENST00000534103	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.77	□□□□□ -0.53
RAB30-213	ENST00000534103	CD2AP	Q9Y5K6	639 aa		11.77	□□□□□ -0.53
RAB30-213	ENST00000534103	CEMIP	Q8WUJ3	1361 aa		11.77	□□□□□ -0.53
RAB30-213	ENST00000534103	ZPR1	O75312	459 aa		11.76	□□□□□ -0.53
RAB30-213	ENST00000534103	MMP10	P09238	476 aa		11.76	□□□□□ -0.53
RAB30-213	ENST00000534103	YY1	P25490	414 aa		11.76	□□□□□ -0.53
RAB30-213	ENST00000534103	WDR43	Q15061	677 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
RAB30-213	ENST00000534103	ZNF790	Q6PG37	636 aa		11.76	□□□□□ -0.53
RAB30-213	ENST00000534103	ARHGEF1	Q92888	912 aa	Known RBP	11.76	□□□□□ -0.53
RAB30-213	ENST00000534103	PARP3	Q9Y6F1	533 aa		11.75	□□□□□ -0.53
RAB30-213	ENST00000534103	HEG1	Q9ULI3	1381 aa		11.75	□□□□□ -0.53
RAB30-213	ENST00000534103	CYP19A1	P11511	503 aa	Predicted RBP	11.74	□□□□□ -0.53
RAB30-213	ENST00000534103	NFE2L2	Q16236	605 aa		11.74	□□□□□ -0.53
RAB30-213	ENST00000534103	INTS5	Q6P9B9	1019 aa	Known RBP	11.74	□□□□□ -0.53
RAB30-213	ENST00000534103	MCM10	Q7L590	875 aa		11.74	□□□□□ -0.53
RAB30-213	ENST00000534103	NLGN2	Q8NFZ4	835 aa		11.74	□□□□□ -0.53
RAB30-213	ENST00000534103	SOS1	Q07889	1333 aa	Predicted RBP	11.74	□□□□□ -0.53
RAB30-213	ENST00000534103	USP42	Q9H9J4	1324 aa	Known RBP	11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms