RNA–Protein interactions for RNA: ENST00000534098.1

TTC39A-218, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2

Gene TTC39A, Length 930 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-218ENST00000534098 BRCA1P38398 1863 aaKnown RBP16.23■□□□□ 0.19
TTC39A-218ENST00000534098 COL5A3P25940 1745 aaPredicted RBP16.23■□□□□ 0.19
TTC39A-218ENST00000534098 GNPATO15228 680 aa16.23■□□□□ 0.19
TTC39A-218ENST00000534098 PPM1GO15355 546 aaPredicted RBP16.23■□□□□ 0.19
TTC39A-218ENST00000534098 PHKG2P15735 406 aa16.22■□□□□ 0.19
TTC39A-218ENST00000534098 PXDNLA1KZ92 1463 aa16.22■□□□□ 0.19
TTC39A-218ENST00000534098 ATP6V1AP38606 617 aa16.21■□□□□ 0.19
TTC39A-218ENST00000534098 IFNL2Q8IZJ0 200 aa16.21■□□□□ 0.19
TTC39A-218ENST00000534098 KDRP35968 1356 aa16.21■□□□□ 0.19
TTC39A-218ENST00000534098 MYH14Q7Z406 1995 aaKnown RBP16.2■□□□□ 0.18
TTC39A-218ENST00000534098 KIF3CO14782 793 aa16.2■□□□□ 0.18
TTC39A-218ENST00000534098 MMP10P09238 476 aa16.2■□□□□ 0.18
TTC39A-218ENST00000534098 ATG3Q9NT62 314 aa16.2■□□□□ 0.18
TTC39A-218ENST00000534098 POLKQ9UBT6 870 aa16.2■□□□□ 0.18
TTC39A-218ENST00000534098 C4AP0C0L4 1744 aa16.19■□□□□ 0.18
TTC39A-218ENST00000534098 PLEKHG2Q9H7P9 1386 aa16.19■□□□□ 0.18
TTC39A-218ENST00000534098 ARFGEF1Q9Y6D6 1849 aa16.18■□□□□ 0.18
TTC39A-218ENST00000534098 C10orf71Q711Q0 1435 aa16.18■□□□□ 0.18
TTC39A-218ENST00000534098 SLC4A9Q96Q91 983 aa16.17■□□□□ 0.18
TTC39A-218ENST00000534098 TGFB2P61812 414 aa16.16■□□□□ 0.18
TTC39A-218ENST00000534098 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
TTC39A-218ENST00000534098 RTCBQ9Y3I0 505 aaKnown RBP16.16■□□□□ 0.18
TTC39A-218ENST00000534098 TRAPPC3LQ5T215 181 aa16.15■□□□□ 0.18
TTC39A-218ENST00000534098 NLGN1Q8N2Q7 840 aa16.15■□□□□ 0.18
TTC39A-218ENST00000534098 A0A0G2JLW4 131 aa16.14■□□□□ 0.17
TTC39A-218ENST00000534098 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
TTC39A-218ENST00000534098 RC3H1Q5TC82 1133 aaKnown RBP16.14■□□□□ 0.17
TTC39A-218ENST00000534098 BCS1LQ9Y276 419 aa16.14■□□□□ 0.17
TTC39A-218ENST00000534098 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
TTC39A-218ENST00000534098 KDM6AO15550 1401 aaPredicted RBP16.13■□□□□ 0.17
TTC39A-218ENST00000534098 ARHGEF1Q92888 912 aaKnown RBP16.13■□□□□ 0.17
TTC39A-218ENST00000534098 RBM42Q9BTD8 480 aaKnown RBP16.13■□□□□ 0.17
TTC39A-218ENST00000534098 GYS1P13807 737 aa16.12■□□□□ 0.17
TTC39A-218ENST00000534098 DCAF5Q96JK2 942 aa16.12■□□□□ 0.17
TTC39A-218ENST00000534098 TJP1Q07157 1748 aa16.11■□□□□ 0.17
TTC39A-218ENST00000534098 RPS6KA4O75676 772 aa16.11■□□□□ 0.17
TTC39A-218ENST00000534098 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
TTC39A-218ENST00000534098 DPEP1P16444 411 aa16.11■□□□□ 0.17
TTC39A-218ENST00000534098 TNNT2P45379 298 aaPredicted RBP16.11■□□□□ 0.17
TTC39A-218ENST00000534098 CCDC87Q9NVE4 849 aa16.11■□□□□ 0.17
TTC39A-218ENST00000534098 WDR90Q96KV7 1748 aa16.11■□□□□ 0.17
TTC39A-218ENST00000534098 SBF1O95248 1867 aa16.1■□□□□ 0.17
TTC39A-218ENST00000534098 TOMM70O94826 608 aa16.1■□□□□ 0.17
TTC39A-218ENST00000534098 APLP1P51693 650 aa16.1■□□□□ 0.17
TTC39A-218ENST00000534098 ARHGAP27Q6ZUM4 889 aa16.1■□□□□ 0.17
TTC39A-218ENST00000534098 SCN11AQ9UI33 1791 aa16.1■□□□□ 0.17
TTC39A-218ENST00000534098 ADAMTS7Q9UKP4 1686 aa16.09■□□□□ 0.17
TTC39A-218ENST00000534098 FCHSD2O94868 740 aa16.09■□□□□ 0.17
TTC39A-218ENST00000534098 RFC4P35249 363 aa16.09■□□□□ 0.17
TTC39A-218ENST00000534098 PLEKHO1Q53GL0 409 aaPredicted RBP16.09■□□□□ 0.17
TTC39A-218ENST00000534098 PARP3Q9Y6F1 533 aa16.09■□□□□ 0.17
TTC39A-218ENST00000534098 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.17
TTC39A-218ENST00000534098 KCNA3P22001 575 aa16.08■□□□□ 0.16
TTC39A-218ENST00000534098 CABP4P57796 275 aa16.08■□□□□ 0.16
TTC39A-218ENST00000534098 ZNF530Q6P9A1 599 aaPredicted RBP16.08■□□□□ 0.16
TTC39A-218ENST00000534098 NMRK2Q9NPI5 230 aa16.08■□□□□ 0.16
TTC39A-218ENST00000534098 DNAJC5GQ8N7S2 189 aa16.07■□□□□ 0.16
TTC39A-218ENST00000534098 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
TTC39A-218ENST00000534098 POLR3GLQ9BT43 218 aa16.06■□□□□ 0.16
TTC39A-218ENST00000534098 PTCD1O75127 700 aaKnown RBP16.05■□□□□ 0.16
TTC39A-218ENST00000534098 CRKLP46109 303 aaKnown RBP16.05■□□□□ 0.16
TTC39A-218ENST00000534098 C9orf131Q5VYM1 1079 aa16.05■□□□□ 0.16
TTC39A-218ENST00000534098 SRP68Q9UHB9 627 aaKnown RBP16.05■□□□□ 0.16
TTC39A-218ENST00000534098 TIMELESSQ9UNS1 1208 aa16.05■□□□□ 0.16
TTC39A-218ENST00000534098 AFDNP55196 1824 aaKnown RBP16.05■□□□□ 0.16
TTC39A-218ENST00000534098 TNRC6CQ9HCJ0 1690 aaKnown RBP16.05■□□□□ 0.16
TTC39A-218ENST00000534098 USP42Q9H9J4 1324 aaKnown RBP16.04■□□□□ 0.16
TTC39A-218ENST00000534098 MTHFSP49914 203 aa16.04■□□□□ 0.16
TTC39A-218ENST00000534098 DDR1Q08345 913 aa16.04■□□□□ 0.16
TTC39A-218ENST00000534098 AEBP1Q8IUX7 1158 aa16.04■□□□□ 0.16
TTC39A-218ENST00000534098 PIM2Q9P1W9 311 aa16.04■□□□□ 0.16
TTC39A-218ENST00000534098 FKBP8Q14318 412 aa16.03■□□□□ 0.16
TTC39A-218ENST00000534098 C1orf141Q5JVX7 400 aa16.03■□□□□ 0.16
TTC39A-218ENST00000534098 NFATC2IPQ8NCF5 419 aa16.03■□□□□ 0.16
TTC39A-218ENST00000534098 RBM46Q8TBY0 533 aaKnown RBP16.03■□□□□ 0.16
TTC39A-218ENST00000534098 KCPQ6ZWJ8 1503 aa16.03■□□□□ 0.16
TTC39A-218ENST00000534098 DLEC1Q9Y238 1755 aa16.02■□□□□ 0.15
TTC39A-218ENST00000534098 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.15
TTC39A-218ENST00000534098 CCDC88AQ3V6T2 1871 aa16.01■□□□□ 0.15
TTC39A-218ENST00000534098 TRIM26Q12899 539 aaPredicted RBP16.01■□□□□ 0.15
TTC39A-218ENST00000534098 DALRD3Q5D0E6 543 aaKnown RBP16.01■□□□□ 0.15
TTC39A-218ENST00000534098 PANK3Q9H999 370 aa16.01■□□□□ 0.15
TTC39A-218ENST00000534098 CHRNA5P30532 468 aa16■□□□□ 0.15
TTC39A-218ENST00000534098 INTS5Q6P9B9 1019 aaKnown RBP16■□□□□ 0.15
TTC39A-218ENST00000534098 RNF181Q9P0P0 153 aa16■□□□□ 0.15
TTC39A-218ENST00000534098 POLRMTO00411 1230 aaKnown RBP15.99■□□□□ 0.15
TTC39A-218ENST00000534098 TM4SF1P30408 202 aa15.99■□□□□ 0.15
TTC39A-218ENST00000534098 SULT6B1Q6IMI4 303 aa15.99■□□□□ 0.15
TTC39A-218ENST00000534098 C16orf71Q8IYS4 520 aaPredicted RBP15.99■□□□□ 0.15
TTC39A-218ENST00000534098 KDM2BQ8NHM5 1336 aa15.98■□□□□ 0.15
TTC39A-218ENST00000534098 MRC1P22897 1456 aa15.98■□□□□ 0.15
TTC39A-218ENST00000534098 HTRA3P83110 453 aa15.98■□□□□ 0.15
TTC39A-218ENST00000534098 FSTL1Q12841 308 aa15.98■□□□□ 0.15
TTC39A-218ENST00000534098 MORC1Q86VD1 984 aa15.98■□□□□ 0.15
TTC39A-218ENST00000534098 DNAJC10Q8IXB1 793 aa15.97■□□□□ 0.15
TTC39A-218ENST00000534098 KLRG1Q96E93 195 aa15.97■□□□□ 0.15
TTC39A-218ENST00000534098 TIAM2Q8IVF5 1701 aa15.97■□□□□ 0.15
TTC39A-218ENST00000534098 SOS1Q07889 1333 aaPredicted RBP15.96■□□□□ 0.15
TTC39A-218ENST00000534098 UBR2Q8IWV8 1755 aa15.96■□□□□ 0.15
TTC39A-218ENST00000534098 HSPA5P11021 654 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms