RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 N4BP2Q86UW6 1770 aaPredicted RBP19.84■□□□□ 0.77
SHARPIN-208ENST00000533948 ANKRD26Q9UPS8 1709 aa19.83■□□□□ 0.77
SHARPIN-208ENST00000533948 ATP6V1AP38606 617 aa19.83■□□□□ 0.77
SHARPIN-208ENST00000533948 EYA1Q99502 592 aa19.83■□□□□ 0.77
SHARPIN-208ENST00000533948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.82■□□□□ 0.76
SHARPIN-208ENST00000533948 KIF13BQ9NQT8 1826 aa19.81■□□□□ 0.76
SHARPIN-208ENST00000533948 ATG3Q9NT62 314 aa19.81■□□□□ 0.76
SHARPIN-208ENST00000533948 PHKG2P15735 406 aa19.8■□□□□ 0.76
SHARPIN-208ENST00000533948 IFNL2Q8IZJ0 200 aa19.8■□□□□ 0.76
SHARPIN-208ENST00000533948 WASHC2AQ641Q2 1341 aa19.79■□□□□ 0.76
SHARPIN-208ENST00000533948 A0A0G2JLW4 131 aa19.79■□□□□ 0.76
SHARPIN-208ENST00000533948 BCS1LQ9Y276 419 aa19.79■□□□□ 0.76
SHARPIN-208ENST00000533948 KDRP35968 1356 aa19.79■□□□□ 0.76
SHARPIN-208ENST00000533948 SLC4A9Q96Q91 983 aa19.78■□□□□ 0.76
SHARPIN-208ENST00000533948 C10orf71Q711Q0 1435 aa19.77■□□□□ 0.76
SHARPIN-208ENST00000533948 CCER1Q8TC90 406 aaPredicted RBP19.77■□□□□ 0.76
SHARPIN-208ENST00000533948 NMRK2Q9NPI5 230 aa19.76■□□□□ 0.75
SHARPIN-208ENST00000533948 DPEP1P16444 411 aa19.75■□□□□ 0.75
SHARPIN-208ENST00000533948 TGFB2P61812 414 aa19.75■□□□□ 0.75
SHARPIN-208ENST00000533948 TRAPPC3LQ5T215 181 aa19.75■□□□□ 0.75
SHARPIN-208ENST00000533948 POLKQ9UBT6 870 aa19.75■□□□□ 0.75
SHARPIN-208ENST00000533948 RTCBQ9Y3I0 505 aaKnown RBP19.75■□□□□ 0.75
SHARPIN-208ENST00000533948 C4AP0C0L4 1744 aa19.74■□□□□ 0.75
SHARPIN-208ENST00000533948 APLP1P51693 650 aa19.74■□□□□ 0.75
SHARPIN-208ENST00000533948 EIF4A2Q14240 407 aaKnown RBP19.74■□□□□ 0.75
SHARPIN-208ENST00000533948 ARHGAP27Q6ZUM4 889 aa19.74■□□□□ 0.75
SHARPIN-208ENST00000533948 ARHGEF1Q92888 912 aaKnown RBP19.74■□□□□ 0.75
SHARPIN-208ENST00000533948 RBM42Q9BTD8 480 aaKnown RBP19.74■□□□□ 0.75
SHARPIN-208ENST00000533948 COL5A3P25940 1745 aaPredicted RBP19.73■□□□□ 0.75
SHARPIN-208ENST00000533948 TOMM70O94826 608 aa19.73■□□□□ 0.75
SHARPIN-208ENST00000533948 NLGN1Q8N2Q7 840 aa19.73■□□□□ 0.75
SHARPIN-208ENST00000533948 DNAJC5GQ8N7S2 189 aa19.73■□□□□ 0.75
SHARPIN-208ENST00000533948 BRCA1P38398 1863 aaKnown RBP19.73■□□□□ 0.75
SHARPIN-208ENST00000533948 FCHSD2O94868 740 aa19.72■□□□□ 0.75
SHARPIN-208ENST00000533948 GYS1P13807 737 aa19.72■□□□□ 0.75
SHARPIN-208ENST00000533948 TNNT2P45379 298 aaPredicted RBP19.72■□□□□ 0.75
SHARPIN-208ENST00000533948 POLR3GLQ9BT43 218 aa19.71■□□□□ 0.75
SHARPIN-208ENST00000533948 CCDC87Q9NVE4 849 aa19.71■□□□□ 0.75
SHARPIN-208ENST00000533948 MYH14Q7Z406 1995 aaKnown RBP19.71■□□□□ 0.75
SHARPIN-208ENST00000533948 ERVV-2B6SEH9 535 aa19.7■□□□□ 0.74
SHARPIN-208ENST00000533948 HSP90AB1P08238 724 aaKnown RBP19.7■□□□□ 0.74
SHARPIN-208ENST00000533948 KDM6AO15550 1401 aaPredicted RBP19.69■□□□□ 0.74
SHARPIN-208ENST00000533948 ZNF831Q5JPB2 1677 aa19.69■□□□□ 0.74
SHARPIN-208ENST00000533948 KCNA3P22001 575 aa19.69■□□□□ 0.74
SHARPIN-208ENST00000533948 RFC4P35249 363 aa19.69■□□□□ 0.74
SHARPIN-208ENST00000533948 HTRA3P83110 453 aa19.69■□□□□ 0.74
SHARPIN-208ENST00000533948 CNTNAP4Q9C0A0 1308 aa19.69■□□□□ 0.74
SHARPIN-208ENST00000533948 WDR90Q96KV7 1748 aa19.68■□□□□ 0.74
SHARPIN-208ENST00000533948 RPS6KA4O75676 772 aa19.68■□□□□ 0.74
SHARPIN-208ENST00000533948 ADRA2BP18089 450 aa19.68■□□□□ 0.74
SHARPIN-208ENST00000533948 PLEKHO1Q53GL0 409 aaPredicted RBP19.68■□□□□ 0.74
SHARPIN-208ENST00000533948 RC3H1Q5TC82 1133 aaKnown RBP19.68■□□□□ 0.74
SHARPIN-208ENST00000533948 C9orf131Q5VYM1 1079 aa19.68■□□□□ 0.74
SHARPIN-208ENST00000533948 DCAF5Q96JK2 942 aa19.68■□□□□ 0.74
SHARPIN-208ENST00000533948 PARP3Q9Y6F1 533 aa19.68■□□□□ 0.74
SHARPIN-208ENST00000533948 SRP68Q9UHB9 627 aaKnown RBP19.67■□□□□ 0.74
SHARPIN-208ENST00000533948 ARFGEF1Q9Y6D6 1849 aa19.67■□□□□ 0.74
SHARPIN-208ENST00000533948 CABP4P57796 275 aa19.66■□□□□ 0.74
SHARPIN-208ENST00000533948 PTCD1O75127 700 aaKnown RBP19.65■□□□□ 0.74
SHARPIN-208ENST00000533948 AMOTQ4VCS5 1084 aa19.65■□□□□ 0.74
SHARPIN-208ENST00000533948 KCPQ6ZWJ8 1503 aa19.65■□□□□ 0.74
SHARPIN-208ENST00000533948 DDR1Q08345 913 aa19.64■□□□□ 0.73
SHARPIN-208ENST00000533948 FKBP8Q14318 412 aa19.64■□□□□ 0.73
SHARPIN-208ENST00000533948 ZNF530Q6P9A1 599 aaPredicted RBP19.64■□□□□ 0.73
SHARPIN-208ENST00000533948 RBM46Q8TBY0 533 aaKnown RBP19.64■□□□□ 0.73
SHARPIN-208ENST00000533948 PLEKHG2Q9H7P9 1386 aa19.63■□□□□ 0.73
SHARPIN-208ENST00000533948 CRKLP46109 303 aaKnown RBP19.63■□□□□ 0.73
SHARPIN-208ENST00000533948 CHRNA5P30532 468 aa19.62■□□□□ 0.73
SHARPIN-208ENST00000533948 MTHFSP49914 203 aa19.62■□□□□ 0.73
SHARPIN-208ENST00000533948 AEBP1Q8IUX7 1158 aa19.62■□□□□ 0.73
SHARPIN-208ENST00000533948 RNF181Q9P0P0 153 aa19.62■□□□□ 0.73
SHARPIN-208ENST00000533948 PIM2Q9P1W9 311 aa19.62■□□□□ 0.73
SHARPIN-208ENST00000533948 TJP1Q07157 1748 aa19.62■□□□□ 0.73
SHARPIN-208ENST00000533948 USP42Q9H9J4 1324 aaKnown RBP19.61■□□□□ 0.73
SHARPIN-208ENST00000533948 HSPA5P11021 654 aaKnown RBP19.61■□□□□ 0.73
SHARPIN-208ENST00000533948 EIF4G2P78344 907 aaKnown RBP eCLIP19.61■□□□□ 0.73
SHARPIN-208ENST00000533948 C16orf71Q8IYS4 520 aaPredicted RBP19.61■□□□□ 0.73
SHARPIN-208ENST00000533948 DALRD3Q5D0E6 543 aaKnown RBP19.6■□□□□ 0.73
SHARPIN-208ENST00000533948 C1orf141Q5JVX7 400 aa19.6■□□□□ 0.73
SHARPIN-208ENST00000533948 NFATC2IPQ8NCF5 419 aa19.59■□□□□ 0.73
SHARPIN-208ENST00000533948 KLRG1Q96E93 195 aa19.59■□□□□ 0.73
SHARPIN-208ENST00000533948 PANK3Q9H999 370 aa19.59■□□□□ 0.73
SHARPIN-208ENST00000533948 RRAGCQ9HB90 399 aa19.59■□□□□ 0.73
SHARPIN-208ENST00000533948 ADAMTS7Q9UKP4 1686 aa19.59■□□□□ 0.73
SHARPIN-208ENST00000533948 COL13A1Q5TAT6 717 aaPredicted RBP19.58■□□□□ 0.72
SHARPIN-208ENST00000533948 SBF1O95248 1867 aa19.58■□□□□ 0.72
SHARPIN-208ENST00000533948 KDM2BQ8NHM5 1336 aa19.56■□□□□ 0.72
SHARPIN-208ENST00000533948 POLRMTO00411 1230 aaKnown RBP19.56■□□□□ 0.72
SHARPIN-208ENST00000533948 RASSF7Q02833 373 aa19.56■□□□□ 0.72
SHARPIN-208ENST00000533948 FSTL1Q12841 308 aa19.56■□□□□ 0.72
SHARPIN-208ENST00000533948 INTS5Q6P9B9 1019 aaKnown RBP19.56■□□□□ 0.72
SHARPIN-208ENST00000533948 MORC1Q86VD1 984 aa19.56■□□□□ 0.72
SHARPIN-208ENST00000533948 PCNTO95613 3336 aa19.56■□□□□ 0.72
SHARPIN-208ENST00000533948 TNRC6CQ9HCJ0 1690 aaKnown RBP19.56■□□□□ 0.72
SHARPIN-208ENST00000533948 JMYQ8N9B5 988 aa19.55■□□□□ 0.72
SHARPIN-208ENST00000533948 TM4SF1P30408 202 aa19.54■□□□□ 0.72
SHARPIN-208ENST00000533948 SCN11AQ9UI33 1791 aa19.53■□□□□ 0.72
SHARPIN-208ENST00000533948 USPL1Q5W0Q7 1092 aa19.53■□□□□ 0.72
SHARPIN-208ENST00000533948 SULT6B1Q6IMI4 303 aa19.53■□□□□ 0.72
SHARPIN-208ENST00000533948 DNAJC10Q8IXB1 793 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms