RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 GNPATO15228 680 aa24.85■■□□□ 1.57
UBXN1-216ENST00000533908 GIGYF1O75420 1035 aaPredicted RBP24.85■■□□□ 1.57
UBXN1-216ENST00000533908 EIF4G2P78344 907 aaKnown RBP eCLIP24.85■■□□□ 1.57
UBXN1-216ENST00000533908 WWC3Q9ULE0 1092 aa24.84■■□□□ 1.57
UBXN1-216ENST00000533908 KDRP35968 1356 aa24.81■■□□□ 1.56
UBXN1-216ENST00000533908 ERVV-2B6SEH9 535 aa24.81■■□□□ 1.56
UBXN1-216ENST00000533908 AEBP1Q8IUX7 1158 aa24.8■■□□□ 1.56
UBXN1-216ENST00000533908 ATP10DQ9P241 1426 aa24.79■■□□□ 1.56
UBXN1-216ENST00000533908 PLEKHO1Q53GL0 409 aaPredicted RBP24.79■■□□□ 1.56
UBXN1-216ENST00000533908 DCAF5Q96JK2 942 aa24.79■■□□□ 1.56
UBXN1-216ENST00000533908 PLEKHG2Q9H7P9 1386 aa24.79■■□□□ 1.56
UBXN1-216ENST00000533908 KDM6AO15550 1401 aaPredicted RBP24.78■■□□□ 1.56
UBXN1-216ENST00000533908 RBM42Q9BTD8 480 aaKnown RBP24.78■■□□□ 1.56
UBXN1-216ENST00000533908 MMP10P09238 476 aa24.77■■□□□ 1.56
UBXN1-216ENST00000533908 ZNF530Q6P9A1 599 aaPredicted RBP24.77■■□□□ 1.56
UBXN1-216ENST00000533908 TRAPPC3LQ5T215 181 aa24.76■■□□□ 1.55
UBXN1-216ENST00000533908 MORC1Q86VD1 984 aa24.76■■□□□ 1.55
UBXN1-216ENST00000533908 HSP90AB1P08238 724 aaKnown RBP24.75■■□□□ 1.55
UBXN1-216ENST00000533908 ARHGEF1Q92888 912 aaKnown RBP24.75■■□□□ 1.55
UBXN1-216ENST00000533908 RTCBQ9Y3I0 505 aaKnown RBP24.75■■□□□ 1.55
UBXN1-216ENST00000533908 CABP4P57796 275 aa24.74■■□□□ 1.55
UBXN1-216ENST00000533908 RC3H1Q5TC82 1133 aaKnown RBP24.74■■□□□ 1.55
UBXN1-216ENST00000533908 ADCY9O60503 1353 aa24.74■■□□□ 1.55
UBXN1-216ENST00000533908 AMOTQ4VCS5 1084 aa24.73■■□□□ 1.55
UBXN1-216ENST00000533908 MTHFSP49914 203 aa24.72■■□□□ 1.55
UBXN1-216ENST00000533908 SULT6B1Q6IMI4 303 aa24.72■■□□□ 1.55
UBXN1-216ENST00000533908 ZNF831Q5JPB2 1677 aa24.72■■□□□ 1.55
UBXN1-216ENST00000533908 RPS6KA4O75676 772 aa24.71■■□□□ 1.55
UBXN1-216ENST00000533908 IL13P35225 146 aa24.71■■□□□ 1.55
UBXN1-216ENST00000533908 NFATC2IPQ8NCF5 419 aa24.71■■□□□ 1.55
UBXN1-216ENST00000533908 ZNF526Q8TF50 670 aaPredicted RBP24.71■■□□□ 1.55
UBXN1-216ENST00000533908 COL5A3P25940 1745 aaPredicted RBP24.7■■□□□ 1.54
UBXN1-216ENST00000533908 CNTNAP4Q9C0A0 1308 aa24.7■■□□□ 1.54
UBXN1-216ENST00000533908 PTCD1O75127 700 aaKnown RBP24.7■■□□□ 1.54
UBXN1-216ENST00000533908 GYS1P13807 737 aa24.7■■□□□ 1.54
UBXN1-216ENST00000533908 NLGN1Q8N2Q7 840 aa24.7■■□□□ 1.54
UBXN1-216ENST00000533908 GPBP1L1Q9HC44 474 aaPredicted RBP24.7■■□□□ 1.54
UBXN1-216ENST00000533908 MYH14Q7Z406 1995 aaKnown RBP24.69■■□□□ 1.54
UBXN1-216ENST00000533908 PXDNLA1KZ92 1463 aa24.69■■□□□ 1.54
UBXN1-216ENST00000533908 KIAA1551Q9HCM1 1747 aa24.69■■□□□ 1.54
UBXN1-216ENST00000533908 A0A0G2JLW4 131 aa24.68■■□□□ 1.54
UBXN1-216ENST00000533908 CCER1Q8TC90 406 aaPredicted RBP24.68■■□□□ 1.54
UBXN1-216ENST00000533908 ADRA2BP18089 450 aa24.67■■□□□ 1.54
UBXN1-216ENST00000533908 AMER1Q5JTC6 1135 aaPredicted RBP24.67■■□□□ 1.54
UBXN1-216ENST00000533908 C1orf141Q5JVX7 400 aa24.67■■□□□ 1.54
UBXN1-216ENST00000533908 KNSTRNQ9Y448 316 aa24.67■■□□□ 1.54
UBXN1-216ENST00000533908 CICQ96RK0 1608 aaPredicted RBP24.67■■□□□ 1.54
UBXN1-216ENST00000533908 KIF13BQ9NQT8 1826 aa24.66■■□□□ 1.54
UBXN1-216ENST00000533908 RFC4P35249 363 aa24.66■■□□□ 1.54
UBXN1-216ENST00000533908 N4BP2Q86UW6 1770 aaPredicted RBP24.65■■□□□ 1.54
UBXN1-216ENST00000533908 TGFB2P61812 414 aa24.65■■□□□ 1.54
UBXN1-216ENST00000533908 C10orf71Q711Q0 1435 aa24.64■■□□□ 1.54
UBXN1-216ENST00000533908 CRKLP46109 303 aaKnown RBP24.64■■□□□ 1.54
UBXN1-216ENST00000533908 DPEP1P16444 411 aa24.63■■□□□ 1.53
UBXN1-216ENST00000533908 LGR6Q9HBX8 967 aa24.63■■□□□ 1.53
UBXN1-216ENST00000533908 SRP68Q9UHB9 627 aaKnown RBP24.63■■□□□ 1.53
UBXN1-216ENST00000533908 BCS1LQ9Y276 419 aa24.62■■□□□ 1.53
UBXN1-216ENST00000533908 C4AP0C0L4 1744 aa24.61■■□□□ 1.53
UBXN1-216ENST00000533908 KCNA3P22001 575 aa24.61■■□□□ 1.53
UBXN1-216ENST00000533908 INTS5Q6P9B9 1019 aaKnown RBP24.61■■□□□ 1.53
UBXN1-216ENST00000533908 KIF7Q2M1P5 1343 aa24.61■■□□□ 1.53
UBXN1-216ENST00000533908 FKBP8Q14318 412 aa24.6■■□□□ 1.53
UBXN1-216ENST00000533908 CCDC87Q9NVE4 849 aa24.6■■□□□ 1.53
UBXN1-216ENST00000533908 PARP3Q9Y6F1 533 aa24.6■■□□□ 1.53
UBXN1-216ENST00000533908 CEP350Q5VT06 3117 aa24.6■■□□□ 1.53
UBXN1-216ENST00000533908 TJP1Q07157 1748 aa24.59■■□□□ 1.53
UBXN1-216ENST00000533908 KIF3CO14782 793 aa24.59■■□□□ 1.53
UBXN1-216ENST00000533908 PER1O15534 1290 aaPredicted RBP24.59■■□□□ 1.53
UBXN1-216ENST00000533908 AKAP4Q5JQC9 854 aa24.59■■□□□ 1.53
UBXN1-216ENST00000533908 SCN11AQ9UI33 1791 aa24.59■■□□□ 1.53
UBXN1-216ENST00000533908 HMOX1P09601 288 aa24.58■■□□□ 1.53
UBXN1-216ENST00000533908 DDR1Q08345 913 aa24.57■■□□□ 1.52
UBXN1-216ENST00000533908 DNAJC10Q8IXB1 793 aa24.57■■□□□ 1.52
UBXN1-216ENST00000533908 SLC52A2Q9HAB3 445 aa24.57■■□□□ 1.52
UBXN1-216ENST00000533908 USP42Q9H9J4 1324 aaKnown RBP24.57■■□□□ 1.52
UBXN1-216ENST00000533908 ARHGAP27Q6ZUM4 889 aa24.56■■□□□ 1.52
UBXN1-216ENST00000533908 RNMTO43148 476 aaKnown RBP24.55■■□□□ 1.52
UBXN1-216ENST00000533908 FCHSD2O94868 740 aa24.55■■□□□ 1.52
UBXN1-216ENST00000533908 SLC39A6Q13433 755 aa24.55■■□□□ 1.52
UBXN1-216ENST00000533908 ADAMTS7Q9UKP4 1686 aa24.54■■□□□ 1.52
UBXN1-216ENST00000533908 HSPA6P17066 643 aa24.54■■□□□ 1.52
UBXN1-216ENST00000533908 MTHFSDQ2M296 383 aaKnown RBP24.54■■□□□ 1.52
UBXN1-216ENST00000533908 TM4SF1P30408 202 aa24.53■■□□□ 1.52
UBXN1-216ENST00000533908 BRCA1P38398 1863 aaKnown RBP24.53■■□□□ 1.52
UBXN1-216ENST00000533908 CYP19A1P11511 503 aaPredicted RBP24.52■■□□□ 1.52
UBXN1-216ENST00000533908 CC2D1BQ5T0F9 858 aaKnown RBP24.52■■□□□ 1.52
UBXN1-216ENST00000533908 POLRMTO00411 1230 aaKnown RBP24.5■■□□□ 1.51
UBXN1-216ENST00000533908 USPL1Q5W0Q7 1092 aa24.5■■□□□ 1.51
UBXN1-216ENST00000533908 SOS1Q07889 1333 aaPredicted RBP24.5■■□□□ 1.51
UBXN1-216ENST00000533908 DIAPH1O60610 1272 aaKnown RBP24.49■■□□□ 1.51
UBXN1-216ENST00000533908 CHRNA5P30532 468 aa24.49■■□□□ 1.51
UBXN1-216ENST00000533908 PIM2Q9P1W9 311 aa24.49■■□□□ 1.51
UBXN1-216ENST00000533908 MRC1P22897 1456 aa24.49■■□□□ 1.51
UBXN1-216ENST00000533908 KCPQ6ZWJ8 1503 aa24.47■■□□□ 1.51
UBXN1-216ENST00000533908 NMRK2Q9NPI5 230 aa24.47■■□□□ 1.51
UBXN1-216ENST00000533908 BCL2L12Q9HB09 334 aa24.46■■□□□ 1.51
UBXN1-216ENST00000533908 ZBTB1Q9Y2K1 713 aa24.46■■□□□ 1.51
UBXN1-216ENST00000533908 VIRMAQ69YN4 1812 aaKnown RBP24.45■■□□□ 1.5
UBXN1-216ENST00000533908 ZPR1O75312 459 aa24.45■■□□□ 1.5
UBXN1-216ENST00000533908 DALRD3Q5D0E6 543 aaKnown RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms