RNA–Protein interactions for RNA: ENST00000533809.2

LMO7-225, Transcript of LIM domain 7, humanhuman

TSL 4

Gene LMO7, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-225ENST00000533809 PHF14O94880 888 aa18.81■□□□□ 0.6
LMO7-225ENST00000533809 EYA1Q99502 592 aa18.81■□□□□ 0.6
LMO7-225ENST00000533809 IGSF1Q8N6C5 1336 aa18.8■□□□□ 0.6
LMO7-225ENST00000533809 LOC102724428A0A0B4J2F2 783 aa18.8■□□□□ 0.6
LMO7-225ENST00000533809 HMGB2P26583 209 aaKnown RBP18.8■□□□□ 0.6
LMO7-225ENST00000533809 SIK1P57059 783 aa18.8■□□□□ 0.6
LMO7-225ENST00000533809 SSFA2P28290 1259 aa18.79■□□□□ 0.6
LMO7-225ENST00000533809 ITPK1Q13572 414 aa18.79■□□□□ 0.6
LMO7-225ENST00000533809 SPG7Q9UQ90 795 aa18.79■□□□□ 0.6
LMO7-225ENST00000533809 KDRP35968 1356 aa18.79■□□□□ 0.6
LMO7-225ENST00000533809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.78■□□□□ 0.65e-8■■■□□ 14.9
LMO7-225ENST00000533809 POLKQ9UBT6 870 aa18.78■□□□□ 0.6
LMO7-225ENST00000533809 ASAP1Q9ULH1 1129 aa18.78■□□□□ 0.6
LMO7-225ENST00000533809 ARFGEF1Q9Y6D6 1849 aa18.78■□□□□ 0.6
LMO7-225ENST00000533809 PHKG2P15735 406 aa18.77■□□□□ 0.6
LMO7-225ENST00000533809 WWC3Q9ULE0 1092 aa18.77■□□□□ 0.6
LMO7-225ENST00000533809 TJP1Q07157 1748 aa18.77■□□□□ 0.59
LMO7-225ENST00000533809 SCN11AQ9UI33 1791 aa18.76■□□□□ 0.59
LMO7-225ENST00000533809 PANK3Q9H999 370 aa18.76■□□□□ 0.59
LMO7-225ENST00000533809 TMOD3Q9NYL9 352 aa18.76■□□□□ 0.59
LMO7-225ENST00000533809 PXDNLA1KZ92 1463 aa18.76■□□□□ 0.59
LMO7-225ENST00000533809 TNNT2P45379 298 aaPredicted RBP18.75■□□□□ 0.59
LMO7-225ENST00000533809 PLEKHG2Q9H7P9 1386 aa18.75■□□□□ 0.59
LMO7-225ENST00000533809 GNPATO15228 680 aa18.74■□□□□ 0.59
LMO7-225ENST00000533809 EIF4A2Q14240 407 aaKnown RBP18.74■□□□□ 0.59
LMO7-225ENST00000533809 IFNL2Q8IZJ0 200 aa18.74■□□□□ 0.59
LMO7-225ENST00000533809 GPBP1L1Q9HC44 474 aaPredicted RBP18.74■□□□□ 0.59
LMO7-225ENST00000533809 ATG3Q9NT62 314 aa18.74■□□□□ 0.59
LMO7-225ENST00000533809 ATP6V1AP38606 617 aa18.73■□□□□ 0.59
LMO7-225ENST00000533809 ADAMTS7Q9UKP4 1686 aa18.73■□□□□ 0.59
LMO7-225ENST00000533809 ZNF526Q8TF50 670 aaPredicted RBP18.72■□□□□ 0.59
LMO7-225ENST00000533809 SLC4A9Q96Q91 983 aa18.72■□□□□ 0.59
LMO7-225ENST00000533809 KDM6AO15550 1401 aaPredicted RBP18.72■□□□□ 0.59
LMO7-225ENST00000533809 C10orf71Q711Q0 1435 aa18.72■□□□□ 0.59
LMO7-225ENST00000533809 SBF1O95248 1867 aa18.69■□□□□ 0.58
LMO7-225ENST00000533809 MMP10P09238 476 aa18.69■□□□□ 0.58
LMO7-225ENST00000533809 MORC1Q86VD1 984 aa18.68■□□□□ 0.58
LMO7-225ENST00000533809 KNSTRNQ9Y448 316 aa18.68■□□□□ 0.58
LMO7-225ENST00000533809 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
LMO7-225ENST00000533809 KIF3CO14782 793 aa18.67■□□□□ 0.58
LMO7-225ENST00000533809 HSPA6P17066 643 aa18.67■□□□□ 0.58
LMO7-225ENST00000533809 CNTNAP4Q9C0A0 1308 aa18.66■□□□□ 0.58
LMO7-225ENST00000533809 ERVV-2B6SEH9 535 aa18.65■□□□□ 0.58
LMO7-225ENST00000533809 IFFO2Q5TF58 517 aa18.65■□□□□ 0.58
LMO7-225ENST00000533809 RTCBQ9Y3I0 505 aaKnown RBP18.65■□□□□ 0.58
LMO7-225ENST00000533809 WDR90Q96KV7 1748 aa18.64■□□□□ 0.57
LMO7-225ENST00000533809 TRAPPC3LQ5T215 181 aa18.64■□□□□ 0.57
LMO7-225ENST00000533809 DLEC1Q9Y238 1755 aa18.63■□□□□ 0.57
LMO7-225ENST00000533809 GYS1P13807 737 aa18.63■□□□□ 0.57
LMO7-225ENST00000533809 RC3H1Q5TC82 1133 aaKnown RBP18.63■□□□□ 0.57
LMO7-225ENST00000533809 ARHGEF1Q92888 912 aaKnown RBP18.63■□□□□ 0.57
LMO7-225ENST00000533809 DCAF5Q96JK2 942 aa18.63■□□□□ 0.57
LMO7-225ENST00000533809 RBM42Q9BTD8 480 aaKnown RBP18.63■□□□□ 0.57
LMO7-225ENST00000533809 CCDC88AQ3V6T2 1871 aa18.63■□□□□ 0.57
LMO7-225ENST00000533809 TGFB2P61812 414 aa18.62■□□□□ 0.57
LMO7-225ENST00000533809 KIF7Q2M1P5 1343 aa18.61■□□□□ 0.57
LMO7-225ENST00000533809 A0A0G2JLW4 131 aa18.61■□□□□ 0.57
LMO7-225ENST00000533809 RPS6KA4O75676 772 aa18.61■□□□□ 0.57
LMO7-225ENST00000533809 HSP90AB1P08238 724 aaKnown RBP18.61■□□□□ 0.57
LMO7-225ENST00000533809 PLEKHO1Q53GL0 409 aaPredicted RBP18.61■□□□□ 0.57
LMO7-225ENST00000533809 ZNF530Q6P9A1 599 aaPredicted RBP18.61■□□□□ 0.57
LMO7-225ENST00000533809 AEBP1Q8IUX7 1158 aa18.61■□□□□ 0.57
LMO7-225ENST00000533809 NLGN1Q8N2Q7 840 aa18.61■□□□□ 0.57
LMO7-225ENST00000533809 NRXN2Q9P2S2 1712 aa18.6■□□□□ 0.57
LMO7-225ENST00000533809 AMOTQ4VCS5 1084 aa18.6■□□□□ 0.57
LMO7-225ENST00000533809 AMER1Q5JTC6 1135 aaPredicted RBP18.6■□□□□ 0.57
LMO7-225ENST00000533809 BCS1LQ9Y276 419 aa18.6■□□□□ 0.57
LMO7-225ENST00000533809 UBR2Q8IWV8 1755 aa18.6■□□□□ 0.57
LMO7-225ENST00000533809 DPEP1P16444 411 aa18.59■□□□□ 0.57
LMO7-225ENST00000533809 TNRC6CQ9HCJ0 1690 aaKnown RBP18.59■□□□□ 0.57
LMO7-225ENST00000533809 CABP4P57796 275 aa18.58■□□□□ 0.56
LMO7-225ENST00000533809 CCDC87Q9NVE4 849 aa18.58■□□□□ 0.56
LMO7-225ENST00000533809 MRC1P22897 1456 aa18.58■□□□□ 0.56
LMO7-225ENST00000533809 KCNA3P22001 575 aa18.57■□□□□ 0.56
LMO7-225ENST00000533809 RFC4P35249 363 aa18.57■□□□□ 0.56
LMO7-225ENST00000533809 SRP68Q9UHB9 627 aaKnown RBP18.56■□□□□ 0.56
LMO7-225ENST00000533809 PARP3Q9Y6F1 533 aa18.56■□□□□ 0.56
LMO7-225ENST00000533809 USP42Q9H9J4 1324 aaKnown RBP18.55■□□□□ 0.56
LMO7-225ENST00000533809 PTCD1O75127 700 aaKnown RBP18.55■□□□□ 0.56
LMO7-225ENST00000533809 CRKLP46109 303 aaKnown RBP18.55■□□□□ 0.56
LMO7-225ENST00000533809 MTHFSP49914 203 aa18.55■□□□□ 0.56
LMO7-225ENST00000533809 DDR1Q08345 913 aa18.55■□□□□ 0.56
LMO7-225ENST00000533809 SULT6B1Q6IMI4 303 aa18.55■□□□□ 0.56
LMO7-225ENST00000533809 TIAM2Q8IVF5 1701 aa18.54■□□□□ 0.56
LMO7-225ENST00000533809 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
LMO7-225ENST00000533809 PER1O15534 1290 aaPredicted RBP18.54■□□□□ 0.56
LMO7-225ENST00000533809 FCHSD2O94868 740 aa18.54■□□□□ 0.56
LMO7-225ENST00000533809 IL13P35225 146 aa18.54■□□□□ 0.56
LMO7-225ENST00000533809 C1orf141Q5JVX7 400 aa18.54■□□□□ 0.56
LMO7-225ENST00000533809 ARHGAP27Q6ZUM4 889 aa18.54■□□□□ 0.56
LMO7-225ENST00000533809 NFATC2IPQ8NCF5 419 aa18.54■□□□□ 0.56
LMO7-225ENST00000533809 NMRK2Q9NPI5 230 aa18.54■□□□□ 0.56
LMO7-225ENST00000533809 SIPA1L3O60292 1781 aaPredicted RBP18.54■□□□□ 0.56
LMO7-225ENST00000533809 FKBP8Q14318 412 aa18.53■□□□□ 0.56
LMO7-225ENST00000533809 ANKRD31Q8N7Z5 1873 aa18.53■□□□□ 0.56
LMO7-225ENST00000533809 TOMM70O94826 608 aa18.51■□□□□ 0.55
LMO7-225ENST00000533809 HOXD11P31277 338 aaPredicted RBP18.51■□□□□ 0.55
LMO7-225ENST00000533809 INTS5Q6P9B9 1019 aaKnown RBP18.51■□□□□ 0.55
LMO7-225ENST00000533809 CACNA1SQ13698 1873 aa18.5■□□□□ 0.55
LMO7-225ENST00000533809 APLP1P51693 650 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms