RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 BCS1LQ9Y276 419 aa17.43■□□□□ 0.38
SVIP-205ENST00000533774 NSD3Q9BZ95 1437 aa17.43■□□□□ 0.38
SVIP-205ENST00000533774 KIF20BQ96Q89 1820 aa17.42■□□□□ 0.38
SVIP-205ENST00000533774 LOC102724428A0A0B4J2F2 783 aa17.42■□□□□ 0.38
SVIP-205ENST00000533774 SIK1P57059 783 aa17.42■□□□□ 0.38
SVIP-205ENST00000533774 ARHGAP27Q6ZUM4 889 aa17.42■□□□□ 0.38
SVIP-205ENST00000533774 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
SVIP-205ENST00000533774 MYH14Q7Z406 1995 aaKnown RBP17.42■□□□□ 0.38
SVIP-205ENST00000533774 C4AP0C0L4 1744 aa17.41■□□□□ 0.38
SVIP-205ENST00000533774 C10orf71Q711Q0 1435 aa17.41■□□□□ 0.38
SVIP-205ENST00000533774 GNPATO15228 680 aa17.41■□□□□ 0.38
SVIP-205ENST00000533774 GGNBP2Q9H3C7 697 aa17.41■□□□□ 0.38
SVIP-205ENST00000533774 INSRP06213 1382 aa17.4■□□□□ 0.38
SVIP-205ENST00000533774 FYB1O15117 783 aa17.4■□□□□ 0.38
SVIP-205ENST00000533774 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
SVIP-205ENST00000533774 TESK2Q96S53 571 aa17.4■□□□□ 0.38
SVIP-205ENST00000533774 ASAP1Q9ULH1 1129 aa17.4■□□□□ 0.38
SVIP-205ENST00000533774 SMG6Q86US8 1419 aaKnown RBP17.39■□□□□ 0.38
SVIP-205ENST00000533774 COL5A3P25940 1745 aaPredicted RBP17.39■□□□□ 0.37
SVIP-205ENST00000533774 KCPQ6ZWJ8 1503 aa17.39■□□□□ 0.37
SVIP-205ENST00000533774 DPEP1P16444 411 aa17.39■□□□□ 0.37
SVIP-205ENST00000533774 TGFB2P61812 414 aa17.39■□□□□ 0.37
SVIP-205ENST00000533774 NKX1-1Q15270 411 aaPredicted RBP17.39■□□□□ 0.37
SVIP-205ENST00000533774 C9orf131Q5VYM1 1079 aa17.38■□□□□ 0.37
SVIP-205ENST00000533774 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
SVIP-205ENST00000533774 TNRC6CQ9HCJ0 1690 aaKnown RBP17.37■□□□□ 0.37
SVIP-205ENST00000533774 KCNA3P22001 575 aa17.37■□□□□ 0.37
SVIP-205ENST00000533774 PRELPP51888 382 aa17.37■□□□□ 0.37
SVIP-205ENST00000533774 TNS4Q8IZW8 715 aa17.37■□□□□ 0.37
SVIP-205ENST00000533774 CCDC88AQ3V6T2 1871 aa17.36■□□□□ 0.37
SVIP-205ENST00000533774 FCHSD2O94868 740 aa17.36■□□□□ 0.37
SVIP-205ENST00000533774 ATP6V1AP38606 617 aa17.36■□□□□ 0.37
SVIP-205ENST00000533774 SLC4A9Q96Q91 983 aa17.35■□□□□ 0.37
SVIP-205ENST00000533774 FLT4P35916 1363 aa17.35■□□□□ 0.37
SVIP-205ENST00000533774 ZNF831Q5JPB2 1677 aa17.35■□□□□ 0.37
SVIP-205ENST00000533774 FSTL1Q12841 308 aa17.34■□□□□ 0.37
SVIP-205ENST00000533774 ATG3Q9NT62 314 aa17.34■□□□□ 0.37
SVIP-205ENST00000533774 ANKRD26Q9UPS8 1709 aa17.34■□□□□ 0.37
SVIP-205ENST00000533774 KDRP35968 1356 aa17.33■□□□□ 0.36
SVIP-205ENST00000533774 ST20-MTHFSA0A0A6YYL1 179 aa17.33■□□□□ 0.36
SVIP-205ENST00000533774 TMF1P82094 1093 aa17.33■□□□□ 0.36
SVIP-205ENST00000533774 RRAGCQ9HB90 399 aa17.33■□□□□ 0.36
SVIP-205ENST00000533774 EMILIN1Q9Y6C2 1016 aa17.33■□□□□ 0.36
SVIP-205ENST00000533774 GYS1P13807 737 aa17.32■□□□□ 0.36
SVIP-205ENST00000533774 C16orf71Q8IYS4 520 aaPredicted RBP17.32■□□□□ 0.36
SVIP-205ENST00000533774 ARHGEF1Q92888 912 aaKnown RBP17.32■□□□□ 0.36
SVIP-205ENST00000533774 TMOD3Q9NYL9 352 aa17.32■□□□□ 0.36
SVIP-205ENST00000533774 PLEKHG2Q9H7P9 1386 aa17.31■□□□□ 0.36
SVIP-205ENST00000533774 TRAPPC3LQ5T215 181 aa17.31■□□□□ 0.36
SVIP-205ENST00000533774 NLGN1Q8N2Q7 840 aa17.31■□□□□ 0.36
SVIP-205ENST00000533774 CCDC87Q9NVE4 849 aa17.31■□□□□ 0.36
SVIP-205ENST00000533774 DCAF5Q96JK2 942 aa17.3■□□□□ 0.36
SVIP-205ENST00000533774 KIF24Q5T7B8 1368 aa17.29■□□□□ 0.36
SVIP-205ENST00000533774 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
SVIP-205ENST00000533774 RNF181Q9P0P0 153 aa17.29■□□□□ 0.36
SVIP-205ENST00000533774 SPG7Q9UQ90 795 aa17.29■□□□□ 0.36
SVIP-205ENST00000533774 RTCBQ9Y3I0 505 aaKnown RBP17.29■□□□□ 0.36
SVIP-205ENST00000533774 PHKG2P15735 406 aa17.28■□□□□ 0.36
SVIP-205ENST00000533774 TONSLQ96HA7 1378 aa17.28■□□□□ 0.36
SVIP-205ENST00000533774 KDM2BQ8NHM5 1336 aa17.27■□□□□ 0.36
SVIP-205ENST00000533774 ADAMTS7Q9UKP4 1686 aa17.27■□□□□ 0.36
SVIP-205ENST00000533774 AFDNP55196 1824 aaKnown RBP17.27■□□□□ 0.36
SVIP-205ENST00000533774 HSPA1AP0DMV8 641 aaKnown RBP17.27■□□□□ 0.36
SVIP-205ENST00000533774 HSPA1BP0DMV9 641 aaKnown RBP17.27■□□□□ 0.36
SVIP-205ENST00000533774 EYA1Q99502 592 aa17.27■□□□□ 0.36
SVIP-205ENST00000533774 PARP3Q9Y6F1 533 aa17.27■□□□□ 0.36
SVIP-205ENST00000533774 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
SVIP-205ENST00000533774 PIM2Q9P1W9 311 aa17.26■□□□□ 0.35
SVIP-205ENST00000533774 RPS6KA4O75676 772 aa17.25■□□□□ 0.35
SVIP-205ENST00000533774 CHRNA5P30532 468 aa17.25■□□□□ 0.35
SVIP-205ENST00000533774 DDR1Q08345 913 aa17.25■□□□□ 0.35
SVIP-205ENST00000533774 IFNL2Q8IZJ0 200 aa17.25■□□□□ 0.35
SVIP-205ENST00000533774 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
SVIP-205ENST00000533774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.25■□□□□ 0.35
SVIP-205ENST00000533774 SRP68Q9UHB9 627 aaKnown RBP17.25■□□□□ 0.35
SVIP-205ENST00000533774 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
SVIP-205ENST00000533774 CNTNAP4Q9C0A0 1308 aa17.24■□□□□ 0.35
SVIP-205ENST00000533774 RFC4P35249 363 aa17.24■□□□□ 0.35
SVIP-205ENST00000533774 DALRD3Q5D0E6 543 aaKnown RBP17.24■□□□□ 0.35
SVIP-205ENST00000533774 SMC1BQ8NDV3 1235 aa17.24■□□□□ 0.35
SVIP-205ENST00000533774 TJP1Q07157 1748 aa17.24■□□□□ 0.35
SVIP-205ENST00000533774 RASSF7Q02833 373 aa17.23■□□□□ 0.35
SVIP-205ENST00000533774 CARD14Q9BXL6 1004 aa17.23■□□□□ 0.35
SVIP-205ENST00000533774 DLEC1Q9Y238 1755 aa17.23■□□□□ 0.35
SVIP-205ENST00000533774 PPM1GO15355 546 aaPredicted RBP17.22■□□□□ 0.35
SVIP-205ENST00000533774 FKBP8Q14318 412 aa17.22■□□□□ 0.35
SVIP-205ENST00000533774 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.35
SVIP-205ENST00000533774 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.35
SVIP-205ENST00000533774 MYCNP04198 464 aaPredicted RBP17.2■□□□□ 0.34
SVIP-205ENST00000533774 DICER1Q9UPY3 1922 aaKnown RBP17.19■□□□□ 0.34
SVIP-205ENST00000533774 USP42Q9H9J4 1324 aaKnown RBP17.19■□□□□ 0.34
SVIP-205ENST00000533774 NRXN2Q9P2S2 1712 aa17.18■□□□□ 0.34
SVIP-205ENST00000533774 POTECB2RU33 542 aa17.18■□□□□ 0.34
SVIP-205ENST00000533774 ERVV-2B6SEH9 535 aa17.17■□□□□ 0.34
SVIP-205ENST00000533774 POLRMTO00411 1230 aaKnown RBP17.17■□□□□ 0.34
SVIP-205ENST00000533774 CRKLP46109 303 aaKnown RBP17.17■□□□□ 0.34
SVIP-205ENST00000533774 GLTPD2A6NH11 291 aa17.16■□□□□ 0.34
SVIP-205ENST00000533774 VEGFAP15692 232 aaPredicted RBP17.16■□□□□ 0.34
SVIP-205ENST00000533774 TM4SF1P30408 202 aa17.16■□□□□ 0.34
SVIP-205ENST00000533774 POLKQ9UBT6 870 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms