RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 LSM11P83369 360 aaKnown RBP eCLIP14.46□□□□□ -0.09
CCDC90B-218ENST00000533761 ANKRD24Q8TF21 1146 aa14.46□□□□□ -0.09
CCDC90B-218ENST00000533761 COL5A2P05997 1499 aaPredicted RBP14.46□□□□□ -0.1
CCDC90B-218ENST00000533761 BCL9LQ86UU0 1499 aa14.46□□□□□ -0.1
CCDC90B-218ENST00000533761 PEAK1Q9H792 1746 aa14.46□□□□□ -0.1
CCDC90B-218ENST00000533761 DIAPH1O60610 1272 aaKnown RBP14.45□□□□□ -0.1
CCDC90B-218ENST00000533761 WDR17Q8IZU2 1322 aa14.45□□□□□ -0.1
CCDC90B-218ENST00000533761 LTV1Q96GA3 475 aaPredicted RBP14.45□□□□□ -0.1
CCDC90B-218ENST00000533761 RGPD5Q99666 1765 aa14.45□□□□□ -0.1
CCDC90B-218ENST00000533761 NEFMP07197 916 aa14.44□□□□□ -0.1
CCDC90B-218ENST00000533761 TMEM92Q6UXU6 159 aa14.44□□□□□ -0.1
CCDC90B-218ENST00000533761 TOM1L2Q6ZVM7 507 aa14.44□□□□□ -0.1
CCDC90B-218ENST00000533761 TRPC5Q9UL62 973 aaPredicted RBP14.44□□□□□ -0.1
CCDC90B-218ENST00000533761 ADAMTS8Q9UP79 889 aa14.44□□□□□ -0.1
CCDC90B-218ENST00000533761 VPS72Q15906 364 aa14.43□□□□□ -0.1
CCDC90B-218ENST00000533761 LARP1Q6PKG0 1096 aaKnown RBP14.43□□□□□ -0.1
CCDC90B-218ENST00000533761 EIF4A2Q14240 407 aaKnown RBP14.43□□□□□ -0.1
CCDC90B-218ENST00000533761 QTRT2Q9H974 415 aaKnown RBP14.43□□□□□ -0.1
CCDC90B-218ENST00000533761 NLRP2Q9NX02 1062 aa14.43□□□□□ -0.1
CCDC90B-218ENST00000533761 CCDC9Q9Y3X0 531 aaKnown RBP14.43□□□□□ -0.1
CCDC90B-218ENST00000533761 CRB1P82279 1406 aa14.42□□□□□ -0.1
CCDC90B-218ENST00000533761 U2AF1L5P0DN76 240 aaPredicted RBP14.42□□□□□ -0.1
CCDC90B-218ENST00000533761 U2AF1Q01081 240 aaKnown RBP eCLIP14.42□□□□□ -0.1
CCDC90B-218ENST00000533761 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.41□□□□□ -0.1
CCDC90B-218ENST00000533761 IL13P35225 146 aa14.41□□□□□ -0.1
CCDC90B-218ENST00000533761 CARD10Q9BWT7 1032 aa14.41□□□□□ -0.1
CCDC90B-218ENST00000533761 NRAPQ86VF7 1730 aa14.41□□□□□ -0.1
CCDC90B-218ENST00000533761 U2SURPO15042 1029 aaKnown RBP14.4□□□□□ -0.1
CCDC90B-218ENST00000533761 FKBP8Q14318 412 aa14.4□□□□□ -0.1
CCDC90B-218ENST00000533761 GJD4Q96KN9 370 aaPredicted RBP14.4□□□□□ -0.1
CCDC90B-218ENST00000533761 USP35Q9P2H5 1018 aa14.4□□□□□ -0.1
CCDC90B-218ENST00000533761 COL3A1P02461 1466 aaPredicted RBP14.4□□□□□ -0.1
CCDC90B-218ENST00000533761 SPATA31A5Q5VU36 1347 aa14.4□□□□□ -0.1
CCDC90B-218ENST00000533761 SPATA31A7Q8IWB4 1347 aa14.4□□□□□ -0.1
CCDC90B-218ENST00000533761 FAM208AQ9UK61 1670 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 ARSIQ5FYB1 569 aa14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 NBPF6Q5VWK0 638 aa14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 MICALL2Q8IY33 904 aa14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 NBPF4Q96M43 638 aa14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 THRAP3Q9Y2W1 955 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 SPATA31A1Q5TZJ5 1347 aa14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 MAPK8IP3Q9UPT6 1336 aa14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 PDE3BQ13370 1112 aa14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 TCP11L2Q8N4U5 519 aa14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 RUNDC1Q96C34 613 aa14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 EYA1Q99502 592 aa14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 HCSTQ9UBK5 93 aa14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 RGS17Q9UGC6 210 aaPredicted RBP14.39□□□□□ -0.11
CCDC90B-218ENST00000533761 ATRNO75882 1429 aa14.38□□□□□ -0.11
CCDC90B-218ENST00000533761 FCHSD2O94868 740 aa14.37□□□□□ -0.11
CCDC90B-218ENST00000533761 RBM6P78332 1123 aaKnown RBP14.37□□□□□ -0.11
CCDC90B-218ENST00000533761 IGSF1Q8N6C5 1336 aa14.36□□□□□ -0.11
CCDC90B-218ENST00000533761 BARGINQ6ZT62 677 aa14.36□□□□□ -0.11
CCDC90B-218ENST00000533761 RXRBP28702 533 aa14.35□□□□□ -0.11
CCDC90B-218ENST00000533761 CDCA7Q9BWT1 371 aaPredicted RBP14.35□□□□□ -0.11
CCDC90B-218ENST00000533761 SULT6B1Q6IMI4 303 aa14.34□□□□□ -0.11
CCDC90B-218ENST00000533761 USHBP1Q8N6Y0 703 aa14.34□□□□□ -0.11
CCDC90B-218ENST00000533761 RAPGEF4Q8WZA2 1011 aa14.34□□□□□ -0.11
CCDC90B-218ENST00000533761 RGPD2P0DJD1 1756 aa14.34□□□□□ -0.11
CCDC90B-218ENST00000533761 IL2RBP14784 551 aa14.34□□□□□ -0.11
CCDC90B-218ENST00000533761 POTEAQ6S8J7 498 aa14.34□□□□□ -0.11
CCDC90B-218ENST00000533761 KDRP35968 1356 aa14.33□□□□□ -0.12
CCDC90B-218ENST00000533761 ONECUT3O60422 494 aaPredicted RBP14.33□□□□□ -0.12
CCDC90B-218ENST00000533761 HMOX1P09601 288 aa14.33□□□□□ -0.12
CCDC90B-218ENST00000533761 FAM98CQ17RN3 349 aaKnown RBP14.33□□□□□ -0.12
CCDC90B-218ENST00000533761 CCDC146Q8IYE0 955 aa14.33□□□□□ -0.12
CCDC90B-218ENST00000533761 EFCAB3Q8N7B9 438 aa14.33□□□□□ -0.12
CCDC90B-218ENST00000533761 RGPD1P0DJD0 1748 aa14.32□□□□□ -0.12
CCDC90B-218ENST00000533761 A0A0G2JS52 829 aa14.32□□□□□ -0.12
CCDC90B-218ENST00000533761 APAF1O14727 1248 aa14.32□□□□□ -0.12
CCDC90B-218ENST00000533761 TATP17735 454 aaPredicted RBP14.32□□□□□ -0.12
CCDC90B-218ENST00000533761 NCAPD2Q15021 1401 aa14.32□□□□□ -0.12
CCDC90B-218ENST00000533761 GLI3P10071 1580 aa14.31□□□□□ -0.12
CCDC90B-218ENST00000533761 AEBP1Q8IUX7 1158 aa14.31□□□□□ -0.12
CCDC90B-218ENST00000533761 PBX2P40425 430 aa14.3□□□□□ -0.12
CCDC90B-218ENST00000533761 PLEKHG2Q9H7P9 1386 aa14.3□□□□□ -0.12
CCDC90B-218ENST00000533761 EXOC5O00471 708 aa14.3□□□□□ -0.12
CCDC90B-218ENST00000533761 CCDC27Q2M243 656 aa14.3□□□□□ -0.12
CCDC90B-218ENST00000533761 PRKAR2BP31323 418 aa14.29□□□□□ -0.12
CCDC90B-218ENST00000533761 LMOD3Q0VAK6 560 aa14.29□□□□□ -0.12
CCDC90B-218ENST00000533761 DDB1Q16531 1140 aa14.29□□□□□ -0.12
CCDC90B-218ENST00000533761 SEPT12Q8IYM1 358 aa14.29□□□□□ -0.12
CCDC90B-218ENST00000533761 RSPH6AQ9H0K4 717 aa14.29□□□□□ -0.12
CCDC90B-218ENST00000533761 SALL2Q9Y467 1007 aaPredicted RBP14.29□□□□□ -0.12
CCDC90B-218ENST00000533761 DISP2A7MBM2 1401 aa14.28□□□□□ -0.12
CCDC90B-218ENST00000533761 VASPP50552 380 aaPredicted RBP14.28□□□□□ -0.12
CCDC90B-218ENST00000533761 AMOTQ4VCS5 1084 aa14.28□□□□□ -0.12
CCDC90B-218ENST00000533761 SPG7Q9UQ90 795 aa14.28□□□□□ -0.12
CCDC90B-218ENST00000533761 CALD1Q05682 793 aaKnown RBP14.27□□□□□ -0.12
CCDC90B-218ENST00000533761 PLEKHO1Q53GL0 409 aaPredicted RBP14.27□□□□□ -0.12
CCDC90B-218ENST00000533761 ZCRB1Q8TBF4 217 aaKnown RBP14.27□□□□□ -0.12
CCDC90B-218ENST00000533761 KHSRPQ92945 711 aaKnown RBP eCLIP14.27□□□□□ -0.12
CCDC90B-218ENST00000533761 PLEKHF1Q96S99 279 aa14.27□□□□□ -0.12
CCDC90B-218ENST00000533761 OVOS2A0A0G2JMS6 1433 aa14.27□□□□□ -0.13
CCDC90B-218ENST00000533761 MEGF6O75095 1541 aa14.27□□□□□ -0.13
CCDC90B-218ENST00000533761 PARP4Q9UKK3 1724 aaKnown RBP14.26□□□□□ -0.13
CCDC90B-218ENST00000533761 E9PSI1 815 aa14.26□□□□□ -0.13
CCDC90B-218ENST00000533761 WDR63Q8IWG1 891 aa14.25□□□□□ -0.13
CCDC90B-218ENST00000533761 THSD7AQ9UPZ6 1657 aa14.25□□□□□ -0.13
CCDC90B-218ENST00000533761 WNK3Q9BYP7 1800 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms