RNA–Protein interactions for RNA: ENST00000533685.1

SYVN1-215, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-215ENST00000533685 TOGARAM1Q9Y4F4 1720 aa16.1■□□□□ 0.17
SYVN1-215ENST00000533685 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
SYVN1-215ENST00000533685 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
SYVN1-215ENST00000533685 SENP3-EIF4A1A0A087X0R7 540 aa16.08■□□□□ 0.16
SYVN1-215ENST00000533685 CT47B1P0C2W7 299 aaPredicted RBP16.08■□□□□ 0.16
SYVN1-215ENST00000533685 NFATC2IPQ8NCF5 419 aa16.08■□□□□ 0.16
SYVN1-215ENST00000533685 FANCIQ9NVI1 1328 aa16.08■□□□□ 0.16
SYVN1-215ENST00000533685 DOT1LQ8TEK3 1739 aa16.08■□□□□ 0.16
SYVN1-215ENST00000533685 BTBD11A6QL63 1104 aa16.07■□□□□ 0.16
SYVN1-215ENST00000533685 SPINK5Q9NQ38 1064 aaPredicted RBP16.07■□□□□ 0.16
SYVN1-215ENST00000533685 MBIPQ9NS73 344 aa16.07■□□□□ 0.16
SYVN1-215ENST00000533685 TSPYL4Q9UJ04 414 aa16.07■□□□□ 0.16
SYVN1-215ENST00000533685 VIRMAQ69YN4 1812 aaKnown RBP16.07■□□□□ 0.16
SYVN1-215ENST00000533685 BRWD3Q6RI45 1802 aa16.06■□□□□ 0.16
SYVN1-215ENST00000533685 NHSQ6T4R5 1651 aa16.06■□□□□ 0.16
SYVN1-215ENST00000533685 ZNF790Q6PG37 636 aa16.06■□□□□ 0.16
SYVN1-215ENST00000533685 CDCA7LQ96GN5 454 aa16.06■□□□□ 0.16
SYVN1-215ENST00000533685 KDM3BQ7LBC6 1761 aa16.05■□□□□ 0.16
SYVN1-215ENST00000533685 PAPPAQ13219 1627 aa16.05■□□□□ 0.16
SYVN1-215ENST00000533685 HEG1Q9ULI3 1381 aa16.05■□□□□ 0.16
SYVN1-215ENST00000533685 HOXB7P09629 217 aa16.05■□□□□ 0.16
SYVN1-215ENST00000533685 PRIM1P49642 420 aaKnown RBP16.05■□□□□ 0.16
SYVN1-215ENST00000533685 PIGBQ92521 554 aa16.05■□□□□ 0.16
SYVN1-215ENST00000533685 ZNF428Q96B54 188 aa16.05■□□□□ 0.16
SYVN1-215ENST00000533685 CHMP4AQ9BY43 222 aa16.05■□□□□ 0.16
SYVN1-215ENST00000533685 BCL11BQ9C0K0 894 aaPredicted RBP16.04■□□□□ 0.16
SYVN1-215ENST00000533685 ITGB4P16144 1822 aa16.03■□□□□ 0.16
SYVN1-215ENST00000533685 TTC5Q8N0Z6 440 aa16.03■□□□□ 0.16
SYVN1-215ENST00000533685 SMARCC1Q92922 1105 aaPredicted RBP16.03■□□□□ 0.16
SYVN1-215ENST00000533685 LAS1LQ9Y4W2 734 aaKnown RBP16.03■□□□□ 0.16
SYVN1-215ENST00000533685 EIF4A1P60842 406 aaKnown RBP16.02■□□□□ 0.16
SYVN1-215ENST00000533685 VSIG10Q8N0Z9 540 aa16.02■□□□□ 0.16
SYVN1-215ENST00000533685 TSR2Q969E8 191 aaKnown RBP16.02■□□□□ 0.16
SYVN1-215ENST00000533685 UBR2Q8IWV8 1755 aa16.01■□□□□ 0.15
SYVN1-215ENST00000533685 SYTL4Q96C24 671 aaPredicted RBP16.01■□□□□ 0.15
SYVN1-215ENST00000533685 ATG3Q9NT62 314 aa16.01■□□□□ 0.15
SYVN1-215ENST00000533685 SBF2Q86WG5 1849 aa16.01■□□□□ 0.15
SYVN1-215ENST00000533685 KCPQ6ZWJ8 1503 aa16■□□□□ 0.15
SYVN1-215ENST00000533685 CENPBP07199 599 aaPredicted RBP16■□□□□ 0.15
SYVN1-215ENST00000533685 HMGB2P26583 209 aaKnown RBP16■□□□□ 0.15
SYVN1-215ENST00000533685 ACSBG1Q96GR2 724 aa16■□□□□ 0.15
SYVN1-215ENST00000533685 FMNL2Q96PY5 1086 aa16■□□□□ 0.15
SYVN1-215ENST00000533685 CICQ96RK0 1608 aaPredicted RBP16■□□□□ 0.15
SYVN1-215ENST00000533685 ZNF831Q5JPB2 1677 aa15.99■□□□□ 0.15
SYVN1-215ENST00000533685 KCNQ2O43526 872 aa15.99■□□□□ 0.15
SYVN1-215ENST00000533685 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
SYVN1-215ENST00000533685 EXOSC9Q06265 439 aaKnown RBP15.98■□□□□ 0.15
SYVN1-215ENST00000533685 SLC39A6Q13433 755 aa15.98■□□□□ 0.15
SYVN1-215ENST00000533685 FAM182BQ5T319 152 aa15.98■□□□□ 0.15
SYVN1-215ENST00000533685 ZNF496Q96IT1 587 aaPredicted RBP15.98■□□□□ 0.15
SYVN1-215ENST00000533685 TEX13AQ9BXU3 409 aaPredicted RBP15.98■□□□□ 0.15
SYVN1-215ENST00000533685 ASAP1Q9ULH1 1129 aa15.98■□□□□ 0.15
SYVN1-215ENST00000533685 PALLDQ8WX93 1383 aa15.98■□□□□ 0.15
SYVN1-215ENST00000533685 GIGYF1O75420 1035 aaPredicted RBP15.97■□□□□ 0.15
SYVN1-215ENST00000533685 SNRPA1P09661 255 aaKnown RBP15.97■□□□□ 0.15
SYVN1-215ENST00000533685 TWISTNBQ3B726 338 aaPredicted RBP15.97■□□□□ 0.15
SYVN1-215ENST00000533685 KCNQ3O43525 872 aa15.96■□□□□ 0.15
SYVN1-215ENST00000533685 VAMP4O75379 141 aa15.96■□□□□ 0.15
SYVN1-215ENST00000533685 C8orf58Q8NAV2 365 aa15.96■□□□□ 0.15
SYVN1-215ENST00000533685 BTAF1O14981 1849 aa15.96■□□□□ 0.14
SYVN1-215ENST00000533685 PLSCR1O15162 318 aa15.95■□□□□ 0.14
SYVN1-215ENST00000533685 ALDH1L2Q3SY69 923 aa15.95■□□□□ 0.14
SYVN1-215ENST00000533685 RGPD3A6NKT7 1758 aaPredicted RBP15.95■□□□□ 0.14
SYVN1-215ENST00000533685 RGPD4Q7Z3J3 1758 aa15.95■□□□□ 0.14
SYVN1-215ENST00000533685 ERBB4Q15303 1308 aa15.94■□□□□ 0.14
SYVN1-215ENST00000533685 LOC102724428A0A0B4J2F2 783 aa15.94■□□□□ 0.14
SYVN1-215ENST00000533685 BRPF1P55201 1214 aaPredicted RBP15.94■□□□□ 0.14
SYVN1-215ENST00000533685 SIK1P57059 783 aa15.94■□□□□ 0.14
SYVN1-215ENST00000533685 CCDC125Q86Z20 511 aa15.94■□□□□ 0.14
SYVN1-215ENST00000533685 TSPYL6Q8N831 410 aa15.94■□□□□ 0.14
SYVN1-215ENST00000533685 TRIM37O94972 964 aa15.93■□□□□ 0.14
SYVN1-215ENST00000533685 SLC27A3Q5K4L6 730 aa15.93■□□□□ 0.14
SYVN1-215ENST00000533685 CCDC30Q5VVM6 783 aa15.93■□□□□ 0.14
SYVN1-215ENST00000533685 KAT6BQ8WYB5 2073 aa15.93■□□□□ 0.14
SYVN1-215ENST00000533685 PTCD1O75127 700 aaKnown RBP15.92■□□□□ 0.14
SYVN1-215ENST00000533685 KRT24Q2M2I5 525 aa15.92■□□□□ 0.14
SYVN1-215ENST00000533685 PTF1AQ7RTS3 328 aa15.92■□□□□ 0.14
SYVN1-215ENST00000533685 RCAN3Q9UKA8 241 aa15.92■□□□□ 0.14
SYVN1-215ENST00000533685 LY75O60449 1722 aa15.91■□□□□ 0.14
SYVN1-215ENST00000533685 LAMB4A4D0S4 1761 aa15.91■□□□□ 0.14
SYVN1-215ENST00000533685 STARD3NLO95772 234 aa15.91■□□□□ 0.14
SYVN1-215ENST00000533685 RARSP54136 660 aaKnown RBP15.91■□□□□ 0.14
SYVN1-215ENST00000533685 HDGFL1Q5TGJ6 251 aa15.91■□□□□ 0.14
SYVN1-215ENST00000533685 TNS1Q9HBL0 1735 aaKnown RBP15.91■□□□□ 0.14
SYVN1-215ENST00000533685 EP400Q96L91 3159 aa15.9■□□□□ 0.14
SYVN1-215ENST00000533685 SLC4A9Q96Q91 983 aa15.9■□□□□ 0.14
SYVN1-215ENST00000533685 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
SYVN1-215ENST00000533685 DBF4Q9UBU7 674 aaPredicted RBP15.89■□□□□ 0.13
SYVN1-215ENST00000533685 C5P01031 1676 aa15.89■□□□□ 0.13
SYVN1-215ENST00000533685 ELL2O00472 640 aaPredicted RBP15.88■□□□□ 0.13
SYVN1-215ENST00000533685 ATP6V1AP38606 617 aa15.88■□□□□ 0.13
SYVN1-215ENST00000533685 STK31Q9BXU1 1019 aa15.88■□□□□ 0.13
SYVN1-215ENST00000533685 KIF16BQ96L93 1317 aa15.88■□□□□ 0.13
SYVN1-215ENST00000533685 CNTNAP4Q9C0A0 1308 aa15.88■□□□□ 0.13
SYVN1-215ENST00000533685 TJP1Q07157 1748 aa15.88■□□□□ 0.13
SYVN1-215ENST00000533685 APBA3O96018 575 aa15.87■□□□□ 0.13
SYVN1-215ENST00000533685 CYP19A1P11511 503 aaPredicted RBP15.87■□□□□ 0.13
SYVN1-215ENST00000533685 RC3H1Q5TC82 1133 aaKnown RBP15.87■□□□□ 0.13
SYVN1-215ENST00000533685 SSH1Q8WYL5 1049 aa15.87■□□□□ 0.13
SYVN1-215ENST00000533685 DDX21Q9NR30 783 aaKnown RBP eCLIP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms