RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SIK1P57059 783 aa11.98□□□□□ -0.49
COPB1-210ENST00000533533 SMIM5Q71RC9 77 aa11.98□□□□□ -0.49
COPB1-210ENST00000533533 EYA1Q99502 592 aa11.98□□□□□ -0.49
COPB1-210ENST00000533533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.49
COPB1-210ENST00000533533 SSFA2P28290 1259 aa11.97□□□□□ -0.49
COPB1-210ENST00000533533 LINC00116Q8NCU8 138 aa11.97□□□□□ -0.49
COPB1-210ENST00000533533 TMOD3Q9NYL9 352 aa11.97□□□□□ -0.49
COPB1-210ENST00000533533 ADCY9O60503 1353 aa11.96□□□□□ -0.49
COPB1-210ENST00000533533 IGSF1Q8N6C5 1336 aa11.96□□□□□ -0.49
COPB1-210ENST00000533533 GPBP1L1Q9HC44 474 aaPredicted RBP11.96□□□□□ -0.49
COPB1-210ENST00000533533 ASAP1Q9ULH1 1129 aa11.96□□□□□ -0.49
COPB1-210ENST00000533533 GNPATO15228 680 aa11.95□□□□□ -0.5
COPB1-210ENST00000533533 PHKG2P15735 406 aa11.95□□□□□ -0.5
COPB1-210ENST00000533533 ITPK1Q13572 414 aa11.95□□□□□ -0.5
COPB1-210ENST00000533533 IFNL2Q8IZJ0 200 aa11.95□□□□□ -0.5
COPB1-210ENST00000533533 POLKQ9UBT6 870 aa11.95□□□□□ -0.5
COPB1-210ENST00000533533 ATP6V1AP38606 617 aa11.94□□□□□ -0.5
COPB1-210ENST00000533533 WWC3Q9ULE0 1092 aa11.94□□□□□ -0.5
COPB1-210ENST00000533533 ZNF526Q8TF50 670 aaPredicted RBP11.93□□□□□ -0.5
COPB1-210ENST00000533533 ATG3Q9NT62 314 aa11.93□□□□□ -0.5
COPB1-210ENST00000533533 KIF13BQ9NQT8 1826 aa11.93□□□□□ -0.5
COPB1-210ENST00000533533 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
COPB1-210ENST00000533533 MMP10P09238 476 aa11.92□□□□□ -0.5
COPB1-210ENST00000533533 EIF4A2Q14240 407 aaKnown RBP11.92□□□□□ -0.5
COPB1-210ENST00000533533 MYH14Q7Z406 1995 aaKnown RBP11.92□□□□□ -0.5
COPB1-210ENST00000533533 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
COPB1-210ENST00000533533 TNNT2P45379 298 aaPredicted RBP11.91□□□□□ -0.5
COPB1-210ENST00000533533 N4BP2Q86UW6 1770 aaPredicted RBP11.91□□□□□ -0.5
COPB1-210ENST00000533533 KDRP35968 1356 aa11.91□□□□□ -0.5
COPB1-210ENST00000533533 ERVV-2B6SEH9 535 aa11.9□□□□□ -0.5
COPB1-210ENST00000533533 HSPA6P17066 643 aa11.9□□□□□ -0.5
COPB1-210ENST00000533533 TRAPPC3LQ5T215 181 aa11.9□□□□□ -0.5
COPB1-210ENST00000533533 RTCBQ9Y3I0 505 aaKnown RBP11.9□□□□□ -0.5
COPB1-210ENST00000533533 CICQ96RK0 1608 aaPredicted RBP11.89□□□□□ -0.51
COPB1-210ENST00000533533 COL5A3P25940 1745 aaPredicted RBP11.89□□□□□ -0.51
COPB1-210ENST00000533533 KIAA1551Q9HCM1 1747 aa11.89□□□□□ -0.51
COPB1-210ENST00000533533 HSP90AB1P08238 724 aaKnown RBP11.89□□□□□ -0.51
COPB1-210ENST00000533533 RC3H1Q5TC82 1133 aaKnown RBP11.89□□□□□ -0.51
COPB1-210ENST00000533533 IFFO2Q5TF58 517 aa11.89□□□□□ -0.51
COPB1-210ENST00000533533 NLGN1Q8N2Q7 840 aa11.89□□□□□ -0.51
COPB1-210ENST00000533533 DCAF5Q96JK2 942 aa11.89□□□□□ -0.51
COPB1-210ENST00000533533 SLC4A9Q96Q91 983 aa11.89□□□□□ -0.51
COPB1-210ENST00000533533 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
COPB1-210ENST00000533533 KIF7Q2M1P5 1343 aa11.88□□□□□ -0.51
COPB1-210ENST00000533533 TGFB2P61812 414 aa11.88□□□□□ -0.51
COPB1-210ENST00000533533 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
COPB1-210ENST00000533533 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
COPB1-210ENST00000533533 PANK3Q9H999 370 aa11.88□□□□□ -0.51
COPB1-210ENST00000533533 BRCA1P38398 1863 aaKnown RBP11.88□□□□□ -0.51
COPB1-210ENST00000533533 A0A0G2JLW4 131 aa11.87□□□□□ -0.51
COPB1-210ENST00000533533 KIF3CO14782 793 aa11.87□□□□□ -0.51
COPB1-210ENST00000533533 ZEB1P37275 1124 aaPredicted RBP11.87□□□□□ -0.51
COPB1-210ENST00000533533 PLEKHO1Q53GL0 409 aaPredicted RBP11.87□□□□□ -0.51
COPB1-210ENST00000533533 CNTNAP4Q9C0A0 1308 aa11.86□□□□□ -0.51
COPB1-210ENST00000533533 C10orf71Q711Q0 1435 aa11.86□□□□□ -0.51
COPB1-210ENST00000533533 C4AP0C0L4 1744 aa11.86□□□□□ -0.51
COPB1-210ENST00000533533 RPS6KA4O75676 772 aa11.86□□□□□ -0.51
COPB1-210ENST00000533533 GYS1P13807 737 aa11.86□□□□□ -0.51
COPB1-210ENST00000533533 RFC4P35249 363 aa11.86□□□□□ -0.51
COPB1-210ENST00000533533 CABP4P57796 275 aa11.86□□□□□ -0.51
COPB1-210ENST00000533533 AMOTQ4VCS5 1084 aa11.86□□□□□ -0.51
COPB1-210ENST00000533533 ZNF530Q6P9A1 599 aaPredicted RBP11.86□□□□□ -0.51
COPB1-210ENST00000533533 BCS1LQ9Y276 419 aa11.86□□□□□ -0.51
COPB1-210ENST00000533533 KDM6AO15550 1401 aaPredicted RBP11.86□□□□□ -0.51
COPB1-210ENST00000533533 CCDC87Q9NVE4 849 aa11.85□□□□□ -0.51
COPB1-210ENST00000533533 ARFGEF1Q9Y6D6 1849 aa11.85□□□□□ -0.51
COPB1-210ENST00000533533 DPEP1P16444 411 aa11.84□□□□□ -0.51
COPB1-210ENST00000533533 MTHFSP49914 203 aa11.84□□□□□ -0.51
COPB1-210ENST00000533533 CNGB1Q14028 1251 aaPredicted RBP11.84□□□□□ -0.51
COPB1-210ENST00000533533 PARP3Q9Y6F1 533 aa11.84□□□□□ -0.51
COPB1-210ENST00000533533 PTCD1O75127 700 aaKnown RBP11.83□□□□□ -0.52
COPB1-210ENST00000533533 FCHSD2O94868 740 aa11.83□□□□□ -0.52
COPB1-210ENST00000533533 C1orf141Q5JVX7 400 aa11.83□□□□□ -0.52
COPB1-210ENST00000533533 ARHGAP27Q6ZUM4 889 aa11.83□□□□□ -0.52
COPB1-210ENST00000533533 AEBP1Q8IUX7 1158 aa11.83□□□□□ -0.52
COPB1-210ENST00000533533 NFATC2IPQ8NCF5 419 aa11.83□□□□□ -0.52
COPB1-210ENST00000533533 KNSTRNQ9Y448 316 aa11.83□□□□□ -0.52
COPB1-210ENST00000533533 SCN11AQ9UI33 1791 aa11.82□□□□□ -0.52
COPB1-210ENST00000533533 TOMM70O94826 608 aa11.82□□□□□ -0.52
COPB1-210ENST00000533533 KCNA3P22001 575 aa11.82□□□□□ -0.52
COPB1-210ENST00000533533 CRKLP46109 303 aaKnown RBP11.82□□□□□ -0.52
COPB1-210ENST00000533533 MORC1Q86VD1 984 aa11.82□□□□□ -0.52
COPB1-210ENST00000533533 APLP1P51693 650 aa11.81□□□□□ -0.52
COPB1-210ENST00000533533 SBF1O95248 1867 aa11.8□□□□□ -0.52
COPB1-210ENST00000533533 TJP1Q07157 1748 aa11.8□□□□□ -0.52
COPB1-210ENST00000533533 PCNTO95613 3336 aa11.8□□□□□ -0.52
COPB1-210ENST00000533533 FKBP8Q14318 412 aa11.8□□□□□ -0.52
COPB1-210ENST00000533533 SULT6B1Q6IMI4 303 aa11.8□□□□□ -0.52
COPB1-210ENST00000533533 NMRK2Q9NPI5 230 aa11.8□□□□□ -0.52
COPB1-210ENST00000533533 PIM2Q9P1W9 311 aa11.8□□□□□ -0.52
COPB1-210ENST00000533533 SRP68Q9UHB9 627 aaKnown RBP11.8□□□□□ -0.52
COPB1-210ENST00000533533 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
COPB1-210ENST00000533533 VIRMAQ69YN4 1812 aaKnown RBP11.8□□□□□ -0.52
COPB1-210ENST00000533533 USP42Q9H9J4 1324 aaKnown RBP11.8□□□□□ -0.52
COPB1-210ENST00000533533 ADAMTS7Q9UKP4 1686 aa11.79□□□□□ -0.52
COPB1-210ENST00000533533 DDR1Q08345 913 aa11.79□□□□□ -0.52
COPB1-210ENST00000533533 C9orf131Q5VYM1 1079 aa11.79□□□□□ -0.52
COPB1-210ENST00000533533 IL13P35225 146 aa11.78□□□□□ -0.52
COPB1-210ENST00000533533 DALRD3Q5D0E6 543 aaKnown RBP11.78□□□□□ -0.52
COPB1-210ENST00000533533 CC2D1BQ5T0F9 858 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms