RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 SCN11AQ9UI33 1791 aa27.61■■■□□ 2.01
AP004608.1-202ENST00000533390 RGS12O14924 1447 aa27.6■■■□□ 2.01
AP004608.1-202ENST00000533390 INTS3Q68E01 1043 aaKnown RBP27.6■■■□□ 2.01
AP004608.1-202ENST00000533390 EIF4A1P60842 406 aaKnown RBP27.59■■■□□ 2.01
AP004608.1-202ENST00000533390 COL5A2P05997 1499 aaPredicted RBP27.59■■■□□ 2.01
AP004608.1-202ENST00000533390 PARP4Q9UKK3 1724 aaKnown RBP27.58■■■□□ 2.01
AP004608.1-202ENST00000533390 HOXB7P09629 217 aa27.58■■■□□ 2.01
AP004608.1-202ENST00000533390 PDE4AP27815 886 aa27.58■■■□□ 2.01
AP004608.1-202ENST00000533390 TOM1L2Q6ZVM7 507 aa27.58■■■□□ 2.01
AP004608.1-202ENST00000533390 IFNL2Q8IZJ0 200 aa27.58■■■□□ 2.01
AP004608.1-202ENST00000533390 AHDC1Q5TGY3 1603 aaPredicted RBP27.57■■■□□ 2
AP004608.1-202ENST00000533390 PHKG2P15735 406 aa27.57■■■□□ 2
AP004608.1-202ENST00000533390 HDGFL1Q5TGJ6 251 aa27.57■■■□□ 2
AP004608.1-202ENST00000533390 NECTIN2Q92692 538 aa27.56■■■□□ 2
AP004608.1-202ENST00000533390 G2E3Q7L622 706 aa27.55■■■□□ 2
AP004608.1-202ENST00000533390 PDZRN3Q9UPQ7 1066 aa27.55■■■□□ 2
AP004608.1-202ENST00000533390 BACH2Q9BYV9 841 aa27.54■■■□□ 2
AP004608.1-202ENST00000533390 FLIIQ13045 1269 aa27.53■■■□□ 2
AP004608.1-202ENST00000533390 KCNQ3O43525 872 aa27.53■■■□□ 2
AP004608.1-202ENST00000533390 HSP90AB1P08238 724 aaKnown RBP27.53■■■□□ 2
AP004608.1-202ENST00000533390 EVA1CP58658 441 aa27.52■■■□□ 2
AP004608.1-202ENST00000533390 KDM6AO15550 1401 aaPredicted RBP27.51■■□□□ 1.99
AP004608.1-202ENST00000533390 FKBP5Q13451 457 aaPredicted RBP27.51■■□□□ 1.99
AP004608.1-202ENST00000533390 CARD10Q9BWT7 1032 aa27.51■■□□□ 1.99
AP004608.1-202ENST00000533390 C1orf115Q9H7X2 142 aa27.51■■□□□ 1.99
AP004608.1-202ENST00000533390 EIF2S2P20042 333 aaKnown RBP27.5■■□□□ 1.99
AP004608.1-202ENST00000533390 CCT4P50991 539 aaKnown RBP27.5■■□□□ 1.99
AP004608.1-202ENST00000533390 SMC5Q8IY18 1101 aa27.5■■□□□ 1.99
AP004608.1-202ENST00000533390 DCAF5Q96JK2 942 aa27.5■■□□□ 1.99
AP004608.1-202ENST00000533390 SLC52A2Q9HAB3 445 aa27.5■■□□□ 1.99
AP004608.1-202ENST00000533390 STRN4Q9NRL3 753 aa27.5■■□□□ 1.99
AP004608.1-202ENST00000533390 COL22A1Q8NFW1 1626 aaPredicted RBP27.49■■□□□ 1.99
AP004608.1-202ENST00000533390 SLC4A10Q6U841 1118 aa27.49■■□□□ 1.99
AP004608.1-202ENST00000533390 CYP27B1O15528 508 aa27.48■■□□□ 1.99
AP004608.1-202ENST00000533390 F6X3S4 739 aa27.47■■□□□ 1.99
AP004608.1-202ENST00000533390 FAM161AQ3B820 660 aa27.47■■□□□ 1.99
AP004608.1-202ENST00000533390 COL14A1Q05707 1796 aaKnown RBP27.46■■□□□ 1.99
AP004608.1-202ENST00000533390 ZCRB1Q8TBF4 217 aaKnown RBP27.46■■□□□ 1.99
AP004608.1-202ENST00000533390 PCDH11XQ9BZA7 1347 aa27.46■■□□□ 1.99
AP004608.1-202ENST00000533390 PCDH11YQ9BZA8 1340 aa27.46■■□□□ 1.99
AP004608.1-202ENST00000533390 IL2RBP14784 551 aa27.45■■□□□ 1.99
AP004608.1-202ENST00000533390 N4BP2Q86UW6 1770 aaPredicted RBP27.45■■□□□ 1.98
AP004608.1-202ENST00000533390 MRC1P22897 1456 aa27.45■■□□□ 1.98
AP004608.1-202ENST00000533390 HEG1Q9ULI3 1381 aa27.45■■□□□ 1.98
AP004608.1-202ENST00000533390 LARP1Q6PKG0 1096 aaKnown RBP27.44■■□□□ 1.98
AP004608.1-202ENST00000533390 PHLPP1O60346 1717 aa27.44■■□□□ 1.98
AP004608.1-202ENST00000533390 GIGYF1O75420 1035 aaPredicted RBP27.44■■□□□ 1.98
AP004608.1-202ENST00000533390 NFATC2IPQ8NCF5 419 aa27.44■■□□□ 1.98
AP004608.1-202ENST00000533390 GCC1Q96CN9 775 aa27.44■■□□□ 1.98
AP004608.1-202ENST00000533390 PXDNLA1KZ92 1463 aa27.43■■□□□ 1.98
AP004608.1-202ENST00000533390 ZNF790Q6PG37 636 aa27.43■■□□□ 1.98
AP004608.1-202ENST00000533390 CHPF2Q9P2E5 772 aa27.42■■□□□ 1.98
AP004608.1-202ENST00000533390 PHAXQ9H814 394 aaKnown RBP27.41■■□□□ 1.98
AP004608.1-202ENST00000533390 BTG4Q9NY30 223 aa27.41■■□□□ 1.98
AP004608.1-202ENST00000533390 DBF4Q9UBU7 674 aaPredicted RBP27.41■■□□□ 1.98
AP004608.1-202ENST00000533390 MEIS3Q99687 375 aa27.4■■□□□ 1.98
AP004608.1-202ENST00000533390 CABP4P57796 275 aa27.4■■□□□ 1.98
AP004608.1-202ENST00000533390 RPAP2Q8IXW5 612 aaPredicted RBP27.4■■□□□ 1.98
AP004608.1-202ENST00000533390 SIRT2Q8IXJ6 389 aa27.39■■□□□ 1.98
AP004608.1-202ENST00000533390 TOM1O60784 492 aa27.38■■□□□ 1.97
AP004608.1-202ENST00000533390 SLC39A6Q13433 755 aa27.38■■□□□ 1.97
AP004608.1-202ENST00000533390 C8orf34Q49A92 452 aa27.38■■□□□ 1.97
AP004608.1-202ENST00000533390 TTC5Q8N0Z6 440 aa27.38■■□□□ 1.97
AP004608.1-202ENST00000533390 ANP32AP39687 249 aaKnown RBP27.38■■□□□ 1.97
AP004608.1-202ENST00000533390 NUCB1Q02818 461 aa27.38■■□□□ 1.97
AP004608.1-202ENST00000533390 COL16A1Q07092 1604 aaPredicted RBP27.38■■□□□ 1.97
AP004608.1-202ENST00000533390 ANKRD44Q8N8A2 993 aa27.37■■□□□ 1.97
AP004608.1-202ENST00000533390 SHANK3Q9BYB0 1731 aa27.37■■□□□ 1.97
AP004608.1-202ENST00000533390 ATP10DQ9P241 1426 aa27.36■■□□□ 1.97
AP004608.1-202ENST00000533390 C5P01031 1676 aa27.35■■□□□ 1.97
AP004608.1-202ENST00000533390 GNAI3P08754 354 aa27.35■■□□□ 1.97
AP004608.1-202ENST00000533390 CEP85Q6P2H3 762 aa27.34■■□□□ 1.97
AP004608.1-202ENST00000533390 CHD1LQ86WJ1 897 aa27.34■■□□□ 1.97
AP004608.1-202ENST00000533390 USP35Q9P2H5 1018 aa27.34■■□□□ 1.97
AP004608.1-202ENST00000533390 PRAMEF22A3QJZ6 481 aa27.33■■□□□ 1.97
AP004608.1-202ENST00000533390 ANKRD45Q5TZF3 282 aa27.33■■□□□ 1.97
AP004608.1-202ENST00000533390 ERVV-2B6SEH9 535 aa27.32■■□□□ 1.96
AP004608.1-202ENST00000533390 GNAI2P04899 355 aa27.32■■□□□ 1.96
AP004608.1-202ENST00000533390 NKX1-1Q15270 411 aaPredicted RBP27.32■■□□□ 1.96
AP004608.1-202ENST00000533390 HYPKQ9NX55 129 aa27.32■■□□□ 1.96
AP004608.1-202ENST00000533390 ANXA1P04083 346 aa27.32■■□□□ 1.96
AP004608.1-202ENST00000533390 DDX54Q8TDD1 881 aaKnown RBP27.32■■□□□ 1.96
AP004608.1-202ENST00000533390 FMNL2Q96PY5 1086 aa27.32■■□□□ 1.96
AP004608.1-202ENST00000533390 LNPKQ9C0E8 428 aa27.32■■□□□ 1.96
AP004608.1-202ENST00000533390 HMMRO75330 724 aa27.31■■□□□ 1.96
AP004608.1-202ENST00000533390 DNAAF4Q8WXU2 420 aa27.31■■□□□ 1.96
AP004608.1-202ENST00000533390 ZNF496Q96IT1 587 aaPredicted RBP27.31■■□□□ 1.96
AP004608.1-202ENST00000533390 SRCIN1Q9C0H9 1055 aa27.31■■□□□ 1.96
AP004608.1-202ENST00000533390 PIP4K2BP78356 416 aa27.3■■□□□ 1.96
AP004608.1-202ENST00000533390 DCTPP1Q9H773 170 aa27.3■■□□□ 1.96
AP004608.1-202ENST00000533390 DDX21Q9NR30 783 aaKnown RBP eCLIP27.3■■□□□ 1.96
AP004608.1-202ENST00000533390 PI4KAP2A4QPH2 592 aa27.3■■□□□ 1.96
AP004608.1-202ENST00000533390 SNRPA1P09661 255 aaKnown RBP27.3■■□□□ 1.96
AP004608.1-202ENST00000533390 NPM2Q86SE8 214 aaKnown RBP27.3■■□□□ 1.96
AP004608.1-202ENST00000533390 PI4KAP1Q8N8J0 262 aa27.3■■□□□ 1.96
AP004608.1-202ENST00000533390 PLCH1Q4KWH8 1693 aa27.29■■□□□ 1.96
AP004608.1-202ENST00000533390 ZBTB47Q9UFB7 747 aaPredicted RBP27.27■■□□□ 1.96
AP004608.1-202ENST00000533390 PROSER3Q2NL68 480 aa27.26■■□□□ 1.95
AP004608.1-202ENST00000533390 LAMB4A4D0S4 1761 aa27.26■■□□□ 1.95
AP004608.1-202ENST00000533390 ADCY9O60503 1353 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms