RNA–Protein interactions for RNA: ENST00000533341.2

GRAMD1B-209, Transcript of GRAM domain containing 1B, humanhuman

TSL 2 BASIC

Gene GRAMD1B, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-209ENST00000533341 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.79■■□□□ 1.88
GRAMD1B-209ENST00000533341 CABP4P57796 275 aa26.79■■□□□ 1.88
GRAMD1B-209ENST00000533341 NLGN2Q8NFZ4 835 aa26.79■■□□□ 1.88
GRAMD1B-209ENST00000533341 RBM42Q9BTD8 480 aaKnown RBP26.79■■□□□ 1.88
GRAMD1B-209ENST00000533341 UBR3Q6ZT12 1888 aa26.79■■□□□ 1.88
GRAMD1B-209ENST00000533341 IL13P35225 146 aa26.78■■□□□ 1.88
GRAMD1B-209ENST00000533341 MTHFSP49914 203 aa26.78■■□□□ 1.88
GRAMD1B-209ENST00000533341 CC2D1BQ5T0F9 858 aaKnown RBP26.78■■□□□ 1.88
GRAMD1B-209ENST00000533341 SMIM5Q71RC9 77 aa26.78■■□□□ 1.88
GRAMD1B-209ENST00000533341 GNPATO15228 680 aa26.77■■□□□ 1.88
GRAMD1B-209ENST00000533341 ITPK1Q13572 414 aa26.77■■□□□ 1.88
GRAMD1B-209ENST00000533341 SSFA2P28290 1259 aa26.76■■□□□ 1.87
GRAMD1B-209ENST00000533341 CNGB1Q14028 1251 aaPredicted RBP26.76■■□□□ 1.87
GRAMD1B-209ENST00000533341 AMIGO3Q86WK7 504 aa26.75■■□□□ 1.87
GRAMD1B-209ENST00000533341 KDM6AO15550 1401 aaPredicted RBP26.72■■□□□ 1.87
GRAMD1B-209ENST00000533341 PER1O15534 1290 aaPredicted RBP26.71■■□□□ 1.87
GRAMD1B-209ENST00000533341 ZNF784Q8NCA9 323 aaPredicted RBP26.71■■□□□ 1.87
GRAMD1B-209ENST00000533341 CD2APQ9Y5K6 639 aa26.71■■□□□ 1.87
GRAMD1B-209ENST00000533341 KDRP35968 1356 aa26.71■■□□□ 1.87
GRAMD1B-209ENST00000533341 RTCBQ9Y3I0 505 aaKnown RBP26.7■■□□□ 1.86
GRAMD1B-209ENST00000533341 HMOX1P09601 288 aa26.69■■□□□ 1.86
GRAMD1B-209ENST00000533341 NFATC2IPQ8NCF5 419 aa26.69■■□□□ 1.86
GRAMD1B-209ENST00000533341 DIAPH1O60610 1272 aaKnown RBP26.68■■□□□ 1.86
GRAMD1B-209ENST00000533341 TRAPPC3LQ5T215 181 aa26.68■■□□□ 1.86
GRAMD1B-209ENST00000533341 GRIN3BO60391 1043 aa26.67■■□□□ 1.86
GRAMD1B-209ENST00000533341 PTCD1O75127 700 aaKnown RBP26.67■■□□□ 1.86
GRAMD1B-209ENST00000533341 SLC4A9Q96Q91 983 aa26.67■■□□□ 1.86
GRAMD1B-209ENST00000533341 AKAP4Q5JQC9 854 aa26.66■■□□□ 1.86
GRAMD1B-209ENST00000533341 SCN11AQ9UI33 1791 aa26.64■■□□□ 1.86
GRAMD1B-209ENST00000533341 ZNF831Q5JPB2 1677 aa26.64■■□□□ 1.86
GRAMD1B-209ENST00000533341 YBX3P16989 372 aaKnown RBP eCLIP26.64■■□□□ 1.86
GRAMD1B-209ENST00000533341 RC3H1Q5TC82 1133 aaKnown RBP26.64■■□□□ 1.86
GRAMD1B-209ENST00000533341 CNTNAP4Q9C0A0 1308 aa26.62■■□□□ 1.85
GRAMD1B-209ENST00000533341 COL5A3P25940 1745 aaPredicted RBP26.62■■□□□ 1.85
GRAMD1B-209ENST00000533341 RFC4P35249 363 aa26.61■■□□□ 1.85
GRAMD1B-209ENST00000533341 UTRNP46939 3433 aa26.61■■□□□ 1.85
GRAMD1B-209ENST00000533341 U2SURPO15042 1029 aaKnown RBP26.6■■□□□ 1.85
GRAMD1B-209ENST00000533341 RPS6KA4O75676 772 aa26.6■■□□□ 1.85
GRAMD1B-209ENST00000533341 ADRA2BP18089 450 aa26.6■■□□□ 1.85
GRAMD1B-209ENST00000533341 NPC1L1Q9UHC9 1359 aa26.59■■□□□ 1.85
GRAMD1B-209ENST00000533341 MMP10P09238 476 aa26.59■■□□□ 1.85
GRAMD1B-209ENST00000533341 NLGN1Q8N2Q7 840 aa26.59■■□□□ 1.85
GRAMD1B-209ENST00000533341 ARHGEF1Q92888 912 aaKnown RBP26.59■■□□□ 1.85
GRAMD1B-209ENST00000533341 LGR6Q9HBX8 967 aa26.59■■□□□ 1.85
GRAMD1B-209ENST00000533341 SLC52A2Q9HAB3 445 aa26.58■■□□□ 1.85
GRAMD1B-209ENST00000533341 WWC3Q9ULE0 1092 aa26.58■■□□□ 1.85
GRAMD1B-209ENST00000533341 VIRMAQ69YN4 1812 aaKnown RBP26.58■■□□□ 1.84
GRAMD1B-209ENST00000533341 RNMTO43148 476 aaKnown RBP26.57■■□□□ 1.84
GRAMD1B-209ENST00000533341 MTHFSDQ2M296 383 aaKnown RBP26.57■■□□□ 1.84
GRAMD1B-209ENST00000533341 CRKLP46109 303 aaKnown RBP26.56■■□□□ 1.84
GRAMD1B-209ENST00000533341 MYH14Q7Z406 1995 aaKnown RBP26.55■■□□□ 1.84
GRAMD1B-209ENST00000533341 SLC39A6Q13433 755 aa26.52■■□□□ 1.84
GRAMD1B-209ENST00000533341 CFAP53Q96M91 514 aa26.52■■□□□ 1.84
GRAMD1B-209ENST00000533341 PARP3Q9Y6F1 533 aa26.52■■□□□ 1.84
GRAMD1B-209ENST00000533341 TJP1Q07157 1748 aa26.51■■□□□ 1.83
GRAMD1B-209ENST00000533341 GYS1P13807 737 aa26.51■■□□□ 1.83
GRAMD1B-209ENST00000533341 CICQ96RK0 1608 aaPredicted RBP26.5■■□□□ 1.83
GRAMD1B-209ENST00000533341 DNAJC10Q8IXB1 793 aa26.5■■□□□ 1.83
GRAMD1B-209ENST00000533341 CCDC87Q9NVE4 849 aa26.5■■□□□ 1.83
GRAMD1B-209ENST00000533341 COL3A1P02461 1466 aaPredicted RBP26.49■■□□□ 1.83
GRAMD1B-209ENST00000533341 C4AP0C0L4 1744 aa26.49■■□□□ 1.83
GRAMD1B-209ENST00000533341 GAS2L2Q8NHY3 880 aa26.48■■□□□ 1.83
GRAMD1B-209ENST00000533341 SRP68Q9UHB9 627 aaKnown RBP26.47■■□□□ 1.83
GRAMD1B-209ENST00000533341 MRC1P22897 1456 aa26.47■■□□□ 1.83
GRAMD1B-209ENST00000533341 GIGYF1O75420 1035 aaPredicted RBP26.46■■□□□ 1.83
GRAMD1B-209ENST00000533341 TGFB2P61812 414 aa26.46■■□□□ 1.83
GRAMD1B-209ENST00000533341 INTS5Q6P9B9 1019 aaKnown RBP26.46■■□□□ 1.83
GRAMD1B-209ENST00000533341 TTC5Q8N0Z6 440 aa26.46■■□□□ 1.83
GRAMD1B-209ENST00000533341 GOLGB1Q14789 3259 aaKnown RBP26.45■■□□□ 1.83
GRAMD1B-209ENST00000533341 GNAT3A8MTJ3 354 aa26.45■■□□□ 1.82
GRAMD1B-209ENST00000533341 ZPR1O75312 459 aa26.45■■□□□ 1.82
GRAMD1B-209ENST00000533341 TEFQ10587 303 aa26.45■■□□□ 1.82
GRAMD1B-209ENST00000533341 NUDCQ9Y266 331 aa26.45■■□□□ 1.82
GRAMD1B-209ENST00000533341 KIF13BQ9NQT8 1826 aa26.44■■□□□ 1.82
GRAMD1B-209ENST00000533341 USP42Q9H9J4 1324 aaKnown RBP26.44■■□□□ 1.82
GRAMD1B-209ENST00000533341 N4BP2Q86UW6 1770 aaPredicted RBP26.44■■□□□ 1.82
GRAMD1B-209ENST00000533341 A0A0G2JLW4 131 aa26.43■■□□□ 1.82
GRAMD1B-209ENST00000533341 C1QTNF8P60827 252 aa26.43■■□□□ 1.82
GRAMD1B-209ENST00000533341 ADAMTS7Q9UKP4 1686 aa26.43■■□□□ 1.82
GRAMD1B-209ENST00000533341 CYP19A1P11511 503 aaPredicted RBP26.42■■□□□ 1.82
GRAMD1B-209ENST00000533341 FKBP8Q14318 412 aa26.42■■□□□ 1.82
GRAMD1B-209ENST00000533341 PXDNLA1KZ92 1463 aa26.42■■□□□ 1.82
GRAMD1B-209ENST00000533341 C10orf71Q711Q0 1435 aa26.41■■□□□ 1.82
GRAMD1B-209ENST00000533341 BCS1LQ9Y276 419 aa26.41■■□□□ 1.82
GRAMD1B-209ENST00000533341 KCPQ6ZWJ8 1503 aa26.4■■□□□ 1.82
GRAMD1B-209ENST00000533341 PPP2R1AP30153 589 aa26.4■■□□□ 1.82
GRAMD1B-209ENST00000533341 PRKAR2BP31323 418 aa26.4■■□□□ 1.82
GRAMD1B-209ENST00000533341 USPL1Q5W0Q7 1092 aa26.4■■□□□ 1.82
GRAMD1B-209ENST00000533341 VSIG10Q8N0Z9 540 aa26.4■■□□□ 1.82
GRAMD1B-209ENST00000533341 ATP10DQ9P241 1426 aa26.39■■□□□ 1.82
GRAMD1B-209ENST00000533341 DPEP1P16444 411 aa26.39■■□□□ 1.82
GRAMD1B-209ENST00000533341 IL17REQ8NFR9 667 aa26.39■■□□□ 1.82
GRAMD1B-209ENST00000533341 SOS1Q07889 1333 aaPredicted RBP26.39■■□□□ 1.81
GRAMD1B-209ENST00000533341 U2AF1L5P0DN76 240 aaPredicted RBP26.38■■□□□ 1.81
GRAMD1B-209ENST00000533341 U2AF1Q01081 240 aaKnown RBP eCLIP26.38■■□□□ 1.81
GRAMD1B-209ENST00000533341 ZBTB1Q9Y2K1 713 aa26.38■■□□□ 1.81
GRAMD1B-209ENST00000533341 STARD3NLO95772 234 aa26.37■■□□□ 1.81
GRAMD1B-209ENST00000533341 CANXP27824 592 aaKnown RBP26.37■■□□□ 1.81
GRAMD1B-209ENST00000533341 KIAA1551Q9HCM1 1747 aa26.36■■□□□ 1.81
GRAMD1B-209ENST00000533341 COL15A1P39059 1388 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms