RNA–Protein interactions for RNA: ENST00000533258.5

MMP8-206, Transcript of matrix metallopeptidase 8, humanhuman

TSL 3

Gene MMP8, Length 707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-206ENST00000533258 POTECB2RU33 542 aa12.3□□□□□ -0.44
MMP8-206ENST00000533258 HSPA8P11142 646 aaKnown RBP12.3□□□□□ -0.44
MMP8-206ENST00000533258 PPARGC1BQ86YN6 1023 aaKnown RBP12.3□□□□□ -0.44
MMP8-206ENST00000533258 ZC3H4Q9UPT8 1303 aaKnown RBP12.3□□□□□ -0.44
MMP8-206ENST00000533258 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
MMP8-206ENST00000533258 ZCRB1Q8TBF4 217 aaKnown RBP12.29□□□□□ -0.44
MMP8-206ENST00000533258 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
MMP8-206ENST00000533258 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
MMP8-206ENST00000533258 VEGFBP49765 207 aa12.28□□□□□ -0.44
MMP8-206ENST00000533258 USP31Q70CQ4 1352 aa12.27□□□□□ -0.45
MMP8-206ENST00000533258 FAM208AQ9UK61 1670 aaKnown RBP12.26□□□□□ -0.45
MMP8-206ENST00000533258 MAP2P11137 1827 aaKnown RBP12.26□□□□□ -0.45
MMP8-206ENST00000533258 PIM2Q9P1W9 311 aa12.26□□□□□ -0.45
MMP8-206ENST00000533258 DALRD3Q5D0E6 543 aaKnown RBP12.25□□□□□ -0.45
MMP8-206ENST00000533258 LINC00116Q8NCU8 138 aa12.25□□□□□ -0.45
MMP8-206ENST00000533258 MEGF6O75095 1541 aa12.25□□□□□ -0.45
MMP8-206ENST00000533258 C4AP0C0L4 1744 aa12.24□□□□□ -0.45
MMP8-206ENST00000533258 CENPJQ9HC77 1338 aaPredicted RBP12.24□□□□□ -0.45
MMP8-206ENST00000533258 CCDC87Q9NVE4 849 aa12.24□□□□□ -0.45
MMP8-206ENST00000533258 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
MMP8-206ENST00000533258 NLGN1Q8N2Q7 840 aa12.23□□□□□ -0.45
MMP8-206ENST00000533258 PASKQ96RG2 1323 aa12.22□□□□□ -0.45
MMP8-206ENST00000533258 TMF1P82094 1093 aa12.22□□□□□ -0.45
MMP8-206ENST00000533258 RASSF7Q02833 373 aa12.22□□□□□ -0.45
MMP8-206ENST00000533258 NBPF1Q3BBV0 1214 aa12.22□□□□□ -0.45
MMP8-206ENST00000533258 MPRIPQ6WCQ1 1025 aa12.22□□□□□ -0.45
MMP8-206ENST00000533258 IP6K1Q92551 441 aa12.22□□□□□ -0.45
MMP8-206ENST00000533258 SMARCC1Q92922 1105 aaPredicted RBP12.22□□□□□ -0.45
MMP8-206ENST00000533258 RGPD2P0DJD1 1756 aa12.22□□□□□ -0.45
MMP8-206ENST00000533258 ITGB4P16144 1822 aa12.21□□□□□ -0.45
MMP8-206ENST00000533258 GNPATO15228 680 aa12.21□□□□□ -0.45
MMP8-206ENST00000533258 POTEIP0CG38 1075 aa12.21□□□□□ -0.45
MMP8-206ENST00000533258 POTEJP0CG39 1038 aa12.21□□□□□ -0.45
MMP8-206ENST00000533258 DSG3P32926 999 aa12.21□□□□□ -0.45
MMP8-206ENST00000533258 CCDC88AQ3V6T2 1871 aa12.21□□□□□ -0.46
MMP8-206ENST00000533258 KTN1Q86UP2 1357 aaKnown RBP12.2□□□□□ -0.46
MMP8-206ENST00000533258 LMNB1P20700 586 aa12.2□□□□□ -0.46
MMP8-206ENST00000533258 POLA2Q14181 598 aa12.2□□□□□ -0.46
MMP8-206ENST00000533258 LTV1Q96GA3 475 aaPredicted RBP12.2□□□□□ -0.46
MMP8-206ENST00000533258 TIAM2Q8IVF5 1701 aa12.2□□□□□ -0.46
MMP8-206ENST00000533258 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
MMP8-206ENST00000533258 ABCB7O75027 752 aa12.19□□□□□ -0.46
MMP8-206ENST00000533258 SIK1P57059 783 aa12.19□□□□□ -0.46
MMP8-206ENST00000533258 ITPK1Q13572 414 aa12.19□□□□□ -0.46
MMP8-206ENST00000533258 NME9Q86XW9 330 aa12.19□□□□□ -0.46
MMP8-206ENST00000533258 MON2Q7Z3U7 1717 aa12.19□□□□□ -0.46
MMP8-206ENST00000533258 GYS1P13807 737 aa12.18□□□□□ -0.46
MMP8-206ENST00000533258 MAP2K1Q02750 393 aaPredicted RBP12.18□□□□□ -0.46
MMP8-206ENST00000533258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.18□□□□□ -0.46
MMP8-206ENST00000533258 PARP3Q9Y6F1 533 aa12.18□□□□□ -0.46
MMP8-206ENST00000533258 CGNL1Q0VF96 1302 aa12.17□□□□□ -0.46
MMP8-206ENST00000533258 TMEM88BA6NKF7 163 aa12.17□□□□□ -0.46
MMP8-206ENST00000533258 CHRNA5P30532 468 aa12.17□□□□□ -0.46
MMP8-206ENST00000533258 PRPF38BQ5VTL8 546 aaKnown RBP12.17□□□□□ -0.46
MMP8-206ENST00000533258 PIGBQ92521 554 aa12.17□□□□□ -0.46
MMP8-206ENST00000533258 SBNO2Q9Y2G9 1366 aa12.17□□□□□ -0.46
MMP8-206ENST00000533258 EVC2Q86UK5 1308 aa12.16□□□□□ -0.46
MMP8-206ENST00000533258 RASSF10A6NK89 507 aa12.16□□□□□ -0.46
MMP8-206ENST00000533258 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
MMP8-206ENST00000533258 TRAPPC3LQ5T215 181 aa12.16□□□□□ -0.46
MMP8-206ENST00000533258 ARHGEF1Q92888 912 aaKnown RBP12.16□□□□□ -0.46
MMP8-206ENST00000533258 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
MMP8-206ENST00000533258 DPY19L2Q6NUT2 758 aa12.15□□□□□ -0.46
MMP8-206ENST00000533258 MCOLN1Q9GZU1 580 aa12.15□□□□□ -0.46
MMP8-206ENST00000533258 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
MMP8-206ENST00000533258 CYP27B1O15528 508 aa12.14□□□□□ -0.47
MMP8-206ENST00000533258 NBPF6Q5VWK0 638 aa12.14□□□□□ -0.47
MMP8-206ENST00000533258 NBPF4Q96M43 638 aa12.14□□□□□ -0.47
MMP8-206ENST00000533258 CD163L1Q9NR16 1453 aa12.14□□□□□ -0.47
MMP8-206ENST00000533258 PCDH11XQ9BZA7 1347 aa12.13□□□□□ -0.47
MMP8-206ENST00000533258 PCDH11YQ9BZA8 1340 aa12.13□□□□□ -0.47
MMP8-206ENST00000533258 HOXC9P31274 260 aa12.13□□□□□ -0.47
MMP8-206ENST00000533258 DEFB115Q30KQ5 88 aa12.13□□□□□ -0.47
MMP8-206ENST00000533258 RTCBQ9Y3I0 505 aaKnown RBP12.13□□□□□ -0.47
MMP8-206ENST00000533258 THSD7BQ9C0I4 1608 aa12.12□□□□□ -0.47
MMP8-206ENST00000533258 DICER1Q9UPY3 1922 aaKnown RBP12.12□□□□□ -0.47
MMP8-206ENST00000533258 NFKBIEO00221 500 aa12.12□□□□□ -0.47
MMP8-206ENST00000533258 ATP6V1AP38606 617 aa12.12□□□□□ -0.47
MMP8-206ENST00000533258 DDR1Q08345 913 aa12.12□□□□□ -0.47
MMP8-206ENST00000533258 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
MMP8-206ENST00000533258 ZBTB12Q9Y330 459 aaPredicted RBP12.12□□□□□ -0.47
MMP8-206ENST00000533258 CASP8AP2Q9UKL3 1982 aa12.11□□□□□ -0.47
MMP8-206ENST00000533258 LDHDQ86WU2 507 aa12.11□□□□□ -0.47
MMP8-206ENST00000533258 RAPGEF4Q8WZA2 1011 aa12.11□□□□□ -0.47
MMP8-206ENST00000533258 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
MMP8-206ENST00000533258 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
MMP8-206ENST00000533258 USHBP1Q8N6Y0 703 aa12.1□□□□□ -0.47
MMP8-206ENST00000533258 TATP17735 454 aaPredicted RBP12.09□□□□□ -0.47
MMP8-206ENST00000533258 RFC4P35249 363 aa12.09□□□□□ -0.47
MMP8-206ENST00000533258 RC3H1Q5TC82 1133 aaKnown RBP12.09□□□□□ -0.47
MMP8-206ENST00000533258 MYH14Q7Z406 1995 aaKnown RBP12.09□□□□□ -0.47
MMP8-206ENST00000533258 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
MMP8-206ENST00000533258 DDNO94850 711 aaPredicted RBP12.08□□□□□ -0.48
MMP8-206ENST00000533258 FBLN1P23142 703 aa12.08□□□□□ -0.48
MMP8-206ENST00000533258 FKBP8Q14318 412 aa12.08□□□□□ -0.48
MMP8-206ENST00000533258 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
MMP8-206ENST00000533258 TSKSQ9UJT2 592 aa12.08□□□□□ -0.48
MMP8-206ENST00000533258 LTBP1Q14766 1721 aa12.08□□□□□ -0.48
MMP8-206ENST00000533258 DLEC1Q9Y238 1755 aa12.07□□□□□ -0.48
MMP8-206ENST00000533258 KDRP35968 1356 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms