RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 MORC1Q86VD1 984 aa31.32■■■□□ 2.6
PKP3-210ENST00000533249 PLEKHG2Q9H7P9 1386 aa31.31■■■□□ 2.6
PKP3-210ENST00000533249 C1QTNF8P60827 252 aa31.29■■■□□ 2.6
PKP3-210ENST00000533249 PLEKHO1Q53GL0 409 aaPredicted RBP31.29■■■□□ 2.6
PKP3-210ENST00000533249 HSP90AB1P08238 724 aaKnown RBP31.27■■■□□ 2.6
PKP3-210ENST00000533249 ZNF530Q6P9A1 599 aaPredicted RBP31.27■■■□□ 2.6
PKP3-210ENST00000533249 DCAF5Q96JK2 942 aa31.27■■■□□ 2.6
PKP3-210ENST00000533249 ERVV-2B6SEH9 535 aa31.26■■■□□ 2.59
PKP3-210ENST00000533249 RBM42Q9BTD8 480 aaKnown RBP31.26■■■□□ 2.59
PKP3-210ENST00000533249 AEBP1Q8IUX7 1158 aa31.25■■■□□ 2.59
PKP3-210ENST00000533249 KNSTRNQ9Y448 316 aa31.25■■■□□ 2.59
PKP3-210ENST00000533249 KDRP35968 1356 aa31.25■■■□□ 2.59
PKP3-210ENST00000533249 WWC3Q9ULE0 1092 aa31.24■■■□□ 2.59
PKP3-210ENST00000533249 SENP3-EIF4A1A0A087X0R7 540 aa31.23■■■□□ 2.59
PKP3-210ENST00000533249 GIGYF1O75420 1035 aaPredicted RBP31.23■■■□□ 2.59
PKP3-210ENST00000533249 AMOTQ4VCS5 1084 aa31.23■■■□□ 2.59
PKP3-210ENST00000533249 KDM6AO15550 1401 aaPredicted RBP31.23■■■□□ 2.59
PKP3-210ENST00000533249 CABP4P57796 275 aa31.22■■■□□ 2.59
PKP3-210ENST00000533249 SLC4A9Q96Q91 983 aa31.22■■■□□ 2.59
PKP3-210ENST00000533249 RTCBQ9Y3I0 505 aaKnown RBP31.2■■■□□ 2.59
PKP3-210ENST00000533249 C1orf141Q5JVX7 400 aa31.19■■■□□ 2.58
PKP3-210ENST00000533249 SULT6B1Q6IMI4 303 aa31.19■■■□□ 2.58
PKP3-210ENST00000533249 MTHFSP49914 203 aa31.18■■■□□ 2.58
PKP3-210ENST00000533249 ZNF831Q5JPB2 1677 aa31.17■■■□□ 2.58
PKP3-210ENST00000533249 MMP10P09238 476 aa31.17■■■□□ 2.58
PKP3-210ENST00000533249 TRAPPC3LQ5T215 181 aa31.17■■■□□ 2.58
PKP3-210ENST00000533249 ATP10DQ9P241 1426 aa31.15■■■□□ 2.58
PKP3-210ENST00000533249 COL5A3P25940 1745 aaPredicted RBP31.15■■■□□ 2.58
PKP3-210ENST00000533249 IL13P35225 146 aa31.14■■■□□ 2.58
PKP3-210ENST00000533249 PTCD1O75127 700 aaKnown RBP31.13■■■□□ 2.57
PKP3-210ENST00000533249 RC3H1Q5TC82 1133 aaKnown RBP31.13■■■□□ 2.57
PKP3-210ENST00000533249 CNTNAP4Q9C0A0 1308 aa31.13■■■□□ 2.57
PKP3-210ENST00000533249 AMER1Q5JTC6 1135 aaPredicted RBP31.12■■■□□ 2.57
PKP3-210ENST00000533249 NFATC2IPQ8NCF5 419 aa31.12■■■□□ 2.57
PKP3-210ENST00000533249 ARHGEF1Q92888 912 aaKnown RBP31.12■■■□□ 2.57
PKP3-210ENST00000533249 KIF7Q2M1P5 1343 aa31.11■■■□□ 2.57
PKP3-210ENST00000533249 RPS6KA4O75676 772 aa31.1■■■□□ 2.57
PKP3-210ENST00000533249 ADRA2BP18089 450 aa31.1■■■□□ 2.57
PKP3-210ENST00000533249 NLGN1Q8N2Q7 840 aa31.1■■■□□ 2.57
PKP3-210ENST00000533249 CICQ96RK0 1608 aaPredicted RBP31.09■■■□□ 2.57
PKP3-210ENST00000533249 RFC4P35249 363 aa31.09■■■□□ 2.57
PKP3-210ENST00000533249 MYH14Q7Z406 1995 aaKnown RBP31.08■■■□□ 2.57
PKP3-210ENST00000533249 GYS1P13807 737 aa31.06■■■□□ 2.56
PKP3-210ENST00000533249 ZNF526Q8TF50 670 aaPredicted RBP31.06■■■□□ 2.56
PKP3-210ENST00000533249 SCN11AQ9UI33 1791 aa31.06■■■□□ 2.56
PKP3-210ENST00000533249 ADCY9O60503 1353 aa31.05■■■□□ 2.56
PKP3-210ENST00000533249 GPBP1L1Q9HC44 474 aaPredicted RBP31.05■■■□□ 2.56
PKP3-210ENST00000533249 PXDNLA1KZ92 1463 aa31.05■■■□□ 2.56
PKP3-210ENST00000533249 KIF13BQ9NQT8 1826 aa31.05■■■□□ 2.56
PKP3-210ENST00000533249 C4AP0C0L4 1744 aa31.04■■■□□ 2.56
PKP3-210ENST00000533249 CRKLP46109 303 aaKnown RBP31.04■■■□□ 2.56
PKP3-210ENST00000533249 N4BP2Q86UW6 1770 aaPredicted RBP31.04■■■□□ 2.56
PKP3-210ENST00000533249 HMOX1P09601 288 aa31.03■■■□□ 2.56
PKP3-210ENST00000533249 AKAP4Q5JQC9 854 aa31.03■■■□□ 2.56
PKP3-210ENST00000533249 KIAA1551Q9HCM1 1747 aa31.03■■■□□ 2.56
PKP3-210ENST00000533249 TJP1Q07157 1748 aa31.02■■■□□ 2.56
PKP3-210ENST00000533249 C10orf71Q711Q0 1435 aa31.02■■■□□ 2.56
PKP3-210ENST00000533249 A0A0G2JLW4 131 aa31.01■■■□□ 2.55
PKP3-210ENST00000533249 TGFB2P61812 414 aa31.01■■■□□ 2.55
PKP3-210ENST00000533249 CC2D1BQ5T0F9 858 aaKnown RBP31.01■■■□□ 2.55
PKP3-210ENST00000533249 CCDC87Q9NVE4 849 aa31.01■■■□□ 2.55
PKP3-210ENST00000533249 PARP3Q9Y6F1 533 aa31.01■■■□□ 2.55
PKP3-210ENST00000533249 LGR6Q9HBX8 967 aa30.99■■■□□ 2.55
PKP3-210ENST00000533249 SRP68Q9UHB9 627 aaKnown RBP30.99■■■□□ 2.55
PKP3-210ENST00000533249 BCS1LQ9Y276 419 aa30.99■■■□□ 2.55
PKP3-210ENST00000533249 SLC52A2Q9HAB3 445 aa30.98■■■□□ 2.55
PKP3-210ENST00000533249 PER1O15534 1290 aaPredicted RBP30.97■■■□□ 2.55
PKP3-210ENST00000533249 RNMTO43148 476 aaKnown RBP30.95■■■□□ 2.55
PKP3-210ENST00000533249 DIAPH1O60610 1272 aaKnown RBP30.95■■■□□ 2.55
PKP3-210ENST00000533249 DPEP1P16444 411 aa30.95■■■□□ 2.55
PKP3-210ENST00000533249 CNGB1Q14028 1251 aaPredicted RBP30.95■■■□□ 2.55
PKP3-210ENST00000533249 INTS5Q6P9B9 1019 aaKnown RBP30.94■■■□□ 2.54
PKP3-210ENST00000533249 DNAJC10Q8IXB1 793 aa30.94■■■□□ 2.54
PKP3-210ENST00000533249 USP42Q9H9J4 1324 aaKnown RBP30.94■■■□□ 2.54
PKP3-210ENST00000533249 VIRMAQ69YN4 1812 aaKnown RBP30.94■■■□□ 2.54
PKP3-210ENST00000533249 SLC39A6Q13433 755 aa30.93■■■□□ 2.54
PKP3-210ENST00000533249 FKBP8Q14318 412 aa30.93■■■□□ 2.54
PKP3-210ENST00000533249 MTHFSDQ2M296 383 aaKnown RBP30.92■■■□□ 2.54
PKP3-210ENST00000533249 MRC1P22897 1456 aa30.91■■■□□ 2.54
PKP3-210ENST00000533249 FCHSD2O94868 740 aa30.91■■■□□ 2.54
PKP3-210ENST00000533249 ARHGAP27Q6ZUM4 889 aa30.9■■■□□ 2.54
PKP3-210ENST00000533249 DDR1Q08345 913 aa30.89■■■□□ 2.54
PKP3-210ENST00000533249 BRCA1P38398 1863 aaKnown RBP30.88■■■□□ 2.53
PKP3-210ENST00000533249 ADAMTS7Q9UKP4 1686 aa30.87■■■□□ 2.53
PKP3-210ENST00000533249 ZPR1O75312 459 aa30.86■■■□□ 2.53
PKP3-210ENST00000533249 CYP19A1P11511 503 aaPredicted RBP30.86■■■□□ 2.53
PKP3-210ENST00000533249 KCPQ6ZWJ8 1503 aa30.86■■■□□ 2.53
PKP3-210ENST00000533249 SOS1Q07889 1333 aaPredicted RBP30.85■■■□□ 2.53
PKP3-210ENST00000533249 KCNA3P22001 575 aa30.85■■■□□ 2.53
PKP3-210ENST00000533249 USPL1Q5W0Q7 1092 aa30.85■■■□□ 2.53
PKP3-210ENST00000533249 U2SURPO15042 1029 aaKnown RBP30.84■■■□□ 2.53
PKP3-210ENST00000533249 PIM2Q9P1W9 311 aa30.83■■■□□ 2.53
PKP3-210ENST00000533249 COL3A1P02461 1466 aaPredicted RBP30.82■■■□□ 2.53
PKP3-210ENST00000533249 POLRMTO00411 1230 aaKnown RBP30.82■■■□□ 2.52
PKP3-210ENST00000533249 ZBTB1Q9Y2K1 713 aa30.82■■■□□ 2.52
PKP3-210ENST00000533249 NPC1L1Q9UHC9 1359 aa30.81■■■□□ 2.52
PKP3-210ENST00000533249 KIF3CO14782 793 aa30.81■■■□□ 2.52
PKP3-210ENST00000533249 TM4SF1P30408 202 aa30.81■■■□□ 2.52
PKP3-210ENST00000533249 ARFGEF1Q9Y6D6 1849 aa30.8■■■□□ 2.52
PKP3-210ENST00000533249 CHRNA5P30532 468 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms