RNA–Protein interactions for RNA: ENST00000533183.1

PKHD1L1-203, Transcript of PKHD1 like 1, humanhuman

TSL 3

Gene PKHD1L1, Length 807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-203ENST00000533183 SIX5Q8N196 739 aa13.23□□□□□ -0.29
PKHD1L1-203ENST00000533183 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.23□□□□□ -0.29
PKHD1L1-203ENST00000533183 SLC4A9Q96Q91 983 aa13.23□□□□□ -0.29
PKHD1L1-203ENST00000533183 TLR1Q15399 786 aa13.22□□□□□ -0.29
PKHD1L1-203ENST00000533183 CRTC2Q53ET0 693 aaPredicted RBP13.22□□□□□ -0.29
PKHD1L1-203ENST00000533183 ZNF594Q96JF6 807 aaPredicted RBP13.22□□□□□ -0.29
PKHD1L1-203ENST00000533183 ZSCAN10Q96SZ4 725 aaPredicted RBP13.22□□□□□ -0.29
PKHD1L1-203ENST00000533183 ZNF358Q9NW07 568 aa13.22□□□□□ -0.29
PKHD1L1-203ENST00000533183 SERTAD1Q9UHV2 236 aa13.22□□□□□ -0.29
PKHD1L1-203ENST00000533183 FAM196BA6NMK8 535 aa13.21□□□□□ -0.29
PKHD1L1-203ENST00000533183 BACH1O14867 736 aa13.21□□□□□ -0.29
PKHD1L1-203ENST00000533183 DKK1O94907 266 aa13.21□□□□□ -0.29
PKHD1L1-203ENST00000533183 SMTNP53814 917 aa13.21□□□□□ -0.29
PKHD1L1-203ENST00000533183 SRPK2P78362 688 aaKnown RBP13.21□□□□□ -0.29
PKHD1L1-203ENST00000533183 SPATA31C2B4DYI2 1134 aa13.2□□□□□ -0.3
PKHD1L1-203ENST00000533183 PTSQ03393 145 aa13.2□□□□□ -0.3
PKHD1L1-203ENST00000533183 PTK7Q13308 1070 aa13.2□□□□□ -0.3
PKHD1L1-203ENST00000533183 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
PKHD1L1-203ENST00000533183 USP17L15C9J2P7 530 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 USP17L10C9JJH3 530 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 USP17L13C9JLJ4 530 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 USP17L12C9JPN9 530 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 USP17L11C9JVI0 530 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 USP17L21D6R901 530 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 USP17L18D6R9N7 530 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 USP17L22D6RA61 530 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 USP17L17D6RBQ6 530 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 USP17L19D6RCP7 530 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 USP17L20D6RJB6 530 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 RHOQP17081 205 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 USP17L24Q0WX57 530 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 POU4F2Q12837 409 aa13.19□□□□□ -0.3
PKHD1L1-203ENST00000533183 A6NJY4 79 aa13.18□□□□□ -0.3
PKHD1L1-203ENST00000533183 MTFR1Q15390 333 aa13.18□□□□□ -0.3
PKHD1L1-203ENST00000533183 PPARGC1BQ86YN6 1023 aaKnown RBP13.18□□□□□ -0.3
PKHD1L1-203ENST00000533183 ZNF775Q96BV0 537 aaPredicted RBP13.18□□□□□ -0.3
PKHD1L1-203ENST00000533183 NXF1Q9UBU9 619 aaKnown RBP13.18□□□□□ -0.3
PKHD1L1-203ENST00000533183 RBM19Q9Y4C8 960 aaKnown RBP13.18□□□□□ -0.3
PKHD1L1-203ENST00000533183 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.17□□□□□ -0.3
PKHD1L1-203ENST00000533183 TMEM214Q6NUQ4 689 aaKnown RBP13.17□□□□□ -0.3
PKHD1L1-203ENST00000533183 NBPF10Q6P3W6 841 aaKnown RBP13.17□□□□□ -0.3
PKHD1L1-203ENST00000533183 NBPF15Q8N660 670 aa13.17□□□□□ -0.3
PKHD1L1-203ENST00000533183 SLC35F4A4IF30 521 aa13.16□□□□□ -0.3
PKHD1L1-203ENST00000533183 M0R2N6 131 aa13.16□□□□□ -0.3
PKHD1L1-203ENST00000533183 GTF2E1P29083 439 aaPredicted RBP13.16□□□□□ -0.3
PKHD1L1-203ENST00000533183 WDR44Q5JSH3 913 aa13.16□□□□□ -0.3
PKHD1L1-203ENST00000533183 TAS1R3Q7RTX0 852 aa13.16□□□□□ -0.3
PKHD1L1-203ENST00000533183 SENP3-EIF4A1A0A087X0R7 540 aa13.15□□□□□ -0.3
PKHD1L1-203ENST00000533183 SFI1A8K8P3 1242 aa13.15□□□□□ -0.3
PKHD1L1-203ENST00000533183 GNASQ5JWF2 1037 aa13.15□□□□□ -0.3
PKHD1L1-203ENST00000533183 ANKMY2Q8IV38 441 aa13.15□□□□□ -0.3
PKHD1L1-203ENST00000533183 RHBDD1Q8TEB9 315 aa13.15□□□□□ -0.3
PKHD1L1-203ENST00000533183 CDK2AP1O14519 115 aa13.14□□□□□ -0.31
PKHD1L1-203ENST00000533183 TERTO14746 1132 aaKnown RBP13.14□□□□□ -0.31
PKHD1L1-203ENST00000533183 EPHA4P54764 986 aa13.14□□□□□ -0.31
PKHD1L1-203ENST00000533183 SEC13P55735 322 aa13.14□□□□□ -0.31
PKHD1L1-203ENST00000533183 DPYDQ12882 1025 aa13.14□□□□□ -0.31
PKHD1L1-203ENST00000533183 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
PKHD1L1-203ENST00000533183 CCDC155Q8N6L0 562 aa13.14□□□□□ -0.31
PKHD1L1-203ENST00000533183 PBXIP1Q96AQ6 731 aa13.14□□□□□ -0.31
PKHD1L1-203ENST00000533183 IQSEC3Q9UPP2 1182 aaPredicted RBP13.14□□□□□ -0.31
PKHD1L1-203ENST00000533183 PPFIA3O75145 1194 aa13.13□□□□□ -0.31
PKHD1L1-203ENST00000533183 TNS4Q8IZW8 715 aa13.13□□□□□ -0.31
PKHD1L1-203ENST00000533183 ARXQ96QS3 562 aa13.13□□□□□ -0.31
PKHD1L1-203ENST00000533183 SCHIP1Q9P0W5 487 aaPredicted RBP13.13□□□□□ -0.31
PKHD1L1-203ENST00000533183 C4orf17Q53FE4 359 aa13.12□□□□□ -0.31
PKHD1L1-203ENST00000533183 USP3Q9Y6I4 520 aa13.12□□□□□ -0.31
PKHD1L1-203ENST00000533183 FOXK2Q01167 660 aa13.11□□□□□ -0.31
PKHD1L1-203ENST00000533183 TSEN2Q8NCE0 465 aaKnown RBP13.11□□□□□ -0.31
PKHD1L1-203ENST00000533183 ATG7O95352 703 aa13.1□□□□□ -0.31
PKHD1L1-203ENST00000533183 PHKA2P46019 1235 aa13.1□□□□□ -0.31
PKHD1L1-203ENST00000533183 VEGFBP49765 207 aa13.1□□□□□ -0.31
PKHD1L1-203ENST00000533183 ZNF295-AS1Q8N0V1 137 aa13.1□□□□□ -0.31
PKHD1L1-203ENST00000533183 TIMMDC1Q9NPL8 285 aa13.1□□□□□ -0.31
PKHD1L1-203ENST00000533183 NOVA2Q9UNW9 492 aaKnown RBP13.1□□□□□ -0.31
PKHD1L1-203ENST00000533183 DYRK1BQ9Y463 629 aa13.1□□□□□ -0.31
PKHD1L1-203ENST00000533183 H3BM21 787 aa13.09□□□□□ -0.31
PKHD1L1-203ENST00000533183 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
PKHD1L1-203ENST00000533183 ELOAQ14241 798 aaKnown RBP13.09□□□□□ -0.31
PKHD1L1-203ENST00000533183 NIFKQ9BYG3 293 aaKnown RBP13.09□□□□□ -0.31
PKHD1L1-203ENST00000533183 FAM200AQ8TCP9 573 aa13.08□□□□□ -0.32
PKHD1L1-203ENST00000533183 SLC9A9Q8IVB4 645 aa13.07□□□□□ -0.32
PKHD1L1-203ENST00000533183 PPP1R15AO75807 674 aaPredicted RBP13.06□□□□□ -0.32
PKHD1L1-203ENST00000533183 ITGA6P23229 1130 aa13.06□□□□□ -0.32
PKHD1L1-203ENST00000533183 SLC16A10Q8TF71 515 aa13.06□□□□□ -0.32
PKHD1L1-203ENST00000533183 ZMIZ1Q9ULJ6 1067 aa13.06□□□□□ -0.32
PKHD1L1-203ENST00000533183 A0A1B0GTH6 734 aa13.05□□□□□ -0.32
PKHD1L1-203ENST00000533183 PLA2G4AP47712 749 aa13.05□□□□□ -0.32
PKHD1L1-203ENST00000533183 TSPAN10Q9H1Z9 355 aaPredicted RBP13.05□□□□□ -0.32
PKHD1L1-203ENST00000533183 CABP1Q9NZU7 370 aa13.05□□□□□ -0.32
PKHD1L1-203ENST00000533183 TBCELQ5QJ74 424 aa13.04□□□□□ -0.32
PKHD1L1-203ENST00000533183 TREML4Q6UXN2 200 aa13.04□□□□□ -0.32
PKHD1L1-203ENST00000533183 ARID3AQ99856 593 aa13.04□□□□□ -0.32
PKHD1L1-203ENST00000533183 HINFPQ9BQA5 517 aa13.04□□□□□ -0.32
PKHD1L1-203ENST00000533183 WFS1O76024 890 aa13.03□□□□□ -0.32
PKHD1L1-203ENST00000533183 TEAD4Q15561 434 aa13.03□□□□□ -0.32
PKHD1L1-203ENST00000533183 GAS2L1Q99501 681 aaPredicted RBP13.03□□□□□ -0.32
PKHD1L1-203ENST00000533183 F11P03951 625 aa13.02□□□□□ -0.33
PKHD1L1-203ENST00000533183 ZDHHC1Q8WTX9 485 aa13.02□□□□□ -0.33
PKHD1L1-203ENST00000533183 STK32AQ8WU08 396 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms