RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 NFATC2IPQ8NCF5 419 aa17.3■□□□□ 0.36
TRAPPC4-212ENST00000533058 ATP6V1AP38606 617 aa17.29■□□□□ 0.36
TRAPPC4-212ENST00000533058 GAS2L2Q8NHY3 880 aa17.29■□□□□ 0.36
TRAPPC4-212ENST00000533058 PRKRIP1Q9H875 184 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC4-212ENST00000533058 RNMTO43148 476 aaKnown RBP17.28■□□□□ 0.36
TRAPPC4-212ENST00000533058 FCHSD2O94868 740 aa17.28■□□□□ 0.36
TRAPPC4-212ENST00000533058 COL23A1Q86Y22 540 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC4-212ENST00000533058 SLC52A2Q9HAB3 445 aa17.28■□□□□ 0.36
TRAPPC4-212ENST00000533058 MYBBP1AQ9BQG0 1328 aaKnown RBP17.27■□□□□ 0.36
TRAPPC4-212ENST00000533058 C5P01031 1676 aa17.27■□□□□ 0.36
TRAPPC4-212ENST00000533058 ITPK1Q13572 414 aa17.27■□□□□ 0.36
TRAPPC4-212ENST00000533058 LINC00116Q8NCU8 138 aa17.27■□□□□ 0.36
TRAPPC4-212ENST00000533058 AK7Q96M32 723 aa17.27■□□□□ 0.36
TRAPPC4-212ENST00000533058 SLC4A9Q96Q91 983 aa17.27■□□□□ 0.36
TRAPPC4-212ENST00000533058 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
TRAPPC4-212ENST00000533058 LGR6Q9HBX8 967 aa17.27■□□□□ 0.36
TRAPPC4-212ENST00000533058 ZNF831Q5JPB2 1677 aa17.26■□□□□ 0.35
TRAPPC4-212ENST00000533058 TAF1LQ8IZX4 1826 aa17.26■□□□□ 0.35
TRAPPC4-212ENST00000533058 SSFA2P28290 1259 aa17.26■□□□□ 0.35
TRAPPC4-212ENST00000533058 C4BP0C0L5 1744 aa17.25■□□□□ 0.35
TRAPPC4-212ENST00000533058 POLD1P28340 1107 aa17.25■□□□□ 0.35
TRAPPC4-212ENST00000533058 RC3H1Q5TC82 1133 aaKnown RBP17.25■□□□□ 0.35
TRAPPC4-212ENST00000533058 ARXQ96QS3 562 aa17.25■□□□□ 0.35
TRAPPC4-212ENST00000533058 MAP3K5Q99683 1374 aa17.25■□□□□ 0.35
TRAPPC4-212ENST00000533058 MRC1P22897 1456 aa17.24■□□□□ 0.35
TRAPPC4-212ENST00000533058 ADAMTS7Q9UKP4 1686 aa17.24■□□□□ 0.35
TRAPPC4-212ENST00000533058 GNAT3A8MTJ3 354 aa17.24■□□□□ 0.35
TRAPPC4-212ENST00000533058 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC4-212ENST00000533058 PRKAR2BP31323 418 aa17.24■□□□□ 0.35
TRAPPC4-212ENST00000533058 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRAPPC4-212ENST00000533058 DIEXFQ68CQ4 756 aaKnown RBP17.24■□□□□ 0.35
TRAPPC4-212ENST00000533058 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
TRAPPC4-212ENST00000533058 SCN11AQ9UI33 1791 aa17.24■□□□□ 0.35
TRAPPC4-212ENST00000533058 COL24A1Q17RW2 1714 aa17.24■□□□□ 0.35
TRAPPC4-212ENST00000533058 PHACTR3Q96KR7 559 aa17.23■□□□□ 0.35
TRAPPC4-212ENST00000533058 TUBGCP6Q96RT7 1819 aa17.23■□□□□ 0.35
TRAPPC4-212ENST00000533058 CNTNAP4Q9C0A0 1308 aa17.22■□□□□ 0.35
TRAPPC4-212ENST00000533058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.22■□□□□ 0.35
TRAPPC4-212ENST00000533058 MSH5O43196 834 aa17.22■□□□□ 0.35
TRAPPC4-212ENST00000533058 AMIGO3Q86WK7 504 aa17.22■□□□□ 0.35
TRAPPC4-212ENST00000533058 SYT17Q9BSW7 474 aa17.22■□□□□ 0.35
TRAPPC4-212ENST00000533058 FHDC1Q9C0D6 1143 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC4-212ENST00000533058 PTCD1O75127 700 aaKnown RBP17.21■□□□□ 0.35
TRAPPC4-212ENST00000533058 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
TRAPPC4-212ENST00000533058 CEMIPQ8WUJ3 1361 aa17.2■□□□□ 0.34
TRAPPC4-212ENST00000533058 GNPATO15228 680 aa17.2■□□□□ 0.34
TRAPPC4-212ENST00000533058 RPS6KA4O75676 772 aa17.2■□□□□ 0.34
TRAPPC4-212ENST00000533058 ADRA2BP18089 450 aa17.2■□□□□ 0.34
TRAPPC4-212ENST00000533058 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
TRAPPC4-212ENST00000533058 HTATSF1O43719 755 aaKnown RBP17.19■□□□□ 0.34
TRAPPC4-212ENST00000533058 VSIG10Q8N0Z9 540 aa17.19■□□□□ 0.34
TRAPPC4-212ENST00000533058 UBR3Q6ZT12 1888 aa17.18■□□□□ 0.34
TRAPPC4-212ENST00000533058 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC4-212ENST00000533058 TEFQ10587 303 aa17.18■□□□□ 0.34
TRAPPC4-212ENST00000533058 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
TRAPPC4-212ENST00000533058 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
TRAPPC4-212ENST00000533058 PHF14O94880 888 aa17.17■□□□□ 0.34
TRAPPC4-212ENST00000533058 SLC39A6Q13433 755 aa17.17■□□□□ 0.34
TRAPPC4-212ENST00000533058 PNNQ9H307 717 aaKnown RBP17.17■□□□□ 0.34
TRAPPC4-212ENST00000533058 CRKLP46109 303 aaKnown RBP17.16■□□□□ 0.34
TRAPPC4-212ENST00000533058 NEFMP07197 916 aa17.15■□□□□ 0.34
TRAPPC4-212ENST00000533058 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
TRAPPC4-212ENST00000533058 ZNF790Q6PG37 636 aa17.15■□□□□ 0.34
TRAPPC4-212ENST00000533058 PLEKHF1Q96S99 279 aa17.15■□□□□ 0.34
TRAPPC4-212ENST00000533058 COL5A3P25940 1745 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC4-212ENST00000533058 MSL1Q68DK7 614 aa17.14■□□□□ 0.33
TRAPPC4-212ENST00000533058 SMIM5Q71RC9 77 aa17.14■□□□□ 0.33
TRAPPC4-212ENST00000533058 DNAJC10Q8IXB1 793 aa17.14■□□□□ 0.33
TRAPPC4-212ENST00000533058 TTC5Q8N0Z6 440 aa17.14■□□□□ 0.33
TRAPPC4-212ENST00000533058 RTF1Q92541 710 aaKnown RBP17.14■□□□□ 0.33
TRAPPC4-212ENST00000533058 ARHGEF1Q92888 912 aaKnown RBP17.14■□□□□ 0.33
TRAPPC4-212ENST00000533058 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
TRAPPC4-212ENST00000533058 KCPQ6ZWJ8 1503 aa17.14■□□□□ 0.33
TRAPPC4-212ENST00000533058 CYP19A1P11511 503 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC4-212ENST00000533058 INTS5Q6P9B9 1019 aaKnown RBP17.13■□□□□ 0.33
TRAPPC4-212ENST00000533058 NLGN1Q8N2Q7 840 aa17.13■□□□□ 0.33
TRAPPC4-212ENST00000533058 CD2APQ9Y5K6 639 aa17.13■□□□□ 0.33
TRAPPC4-212ENST00000533058 RFC4P35249 363 aa17.12■□□□□ 0.33
TRAPPC4-212ENST00000533058 TEX13AQ9BXU3 409 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC4-212ENST00000533058 CCDC87Q9NVE4 849 aa17.12■□□□□ 0.33
TRAPPC4-212ENST00000533058 TJP1Q07157 1748 aa17.1■□□□□ 0.33
TRAPPC4-212ENST00000533058 VIRMAQ69YN4 1812 aaKnown RBP17.1■□□□□ 0.33
TRAPPC4-212ENST00000533058 MYH14Q7Z406 1995 aaKnown RBP17.1■□□□□ 0.33
TRAPPC4-212ENST00000533058 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
TRAPPC4-212ENST00000533058 ZNF496Q96IT1 587 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC4-212ENST00000533058 HEG1Q9ULI3 1381 aa17.1■□□□□ 0.33
TRAPPC4-212ENST00000533058 STARD3NLO95772 234 aa17.09■□□□□ 0.33
TRAPPC4-212ENST00000533058 GYS1P13807 737 aa17.09■□□□□ 0.33
TRAPPC4-212ENST00000533058 NFE2L2Q16236 605 aa17.09■□□□□ 0.33
TRAPPC4-212ENST00000533058 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
TRAPPC4-212ENST00000533058 MCM10Q7L590 875 aa17.09■□□□□ 0.33
TRAPPC4-212ENST00000533058 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
TRAPPC4-212ENST00000533058 UBR2Q8IWV8 1755 aa17.09■□□□□ 0.33
TRAPPC4-212ENST00000533058 SIPA1L3O60292 1781 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC4-212ENST00000533058 SOS1Q07889 1333 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC4-212ENST00000533058 USP42Q9H9J4 1324 aaKnown RBP17.08■□□□□ 0.32
TRAPPC4-212ENST00000533058 MAPK8IP3Q9UPT6 1336 aa17.07■□□□□ 0.32
TRAPPC4-212ENST00000533058 MMP10P09238 476 aa17.07■□□□□ 0.32
TRAPPC4-212ENST00000533058 TAF7Q15545 349 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC4-212ENST00000533058 KLHL34Q8N239 644 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms