RNA–Protein interactions for RNA: ENST00000533039.2

SOX9-AS1-210, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 426 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-210ENST00000533039 ERVV-2B6SEH9 535 aa11.88□□□□□ -0.51
SOX9-AS1-210ENST00000533039 SIK1P57059 783 aa11.88□□□□□ -0.51
SOX9-AS1-210ENST00000533039 SULT6B1Q6IMI4 303 aa11.88□□□□□ -0.51
SOX9-AS1-210ENST00000533039 ASAP1Q9ULH1 1129 aa11.88□□□□□ -0.51
SOX9-AS1-210ENST00000533039 COL5A3P25940 1745 aaPredicted RBP11.87□□□□□ -0.51
SOX9-AS1-210ENST00000533039 MTHFSP49914 203 aa11.87□□□□□ -0.51
SOX9-AS1-210ENST00000533039 PER1O15534 1290 aaPredicted RBP11.86□□□□□ -0.51
SOX9-AS1-210ENST00000533039 IL13P35225 146 aa11.86□□□□□ -0.51
SOX9-AS1-210ENST00000533039 ATP6V1AP38606 617 aa11.86□□□□□ -0.51
SOX9-AS1-210ENST00000533039 CABP4P57796 275 aa11.86□□□□□ -0.51
SOX9-AS1-210ENST00000533039 CC2D1BQ5T0F9 858 aaKnown RBP11.86□□□□□ -0.51
SOX9-AS1-210ENST00000533039 AEBP1Q8IUX7 1158 aa11.86□□□□□ -0.51
SOX9-AS1-210ENST00000533039 ATG3Q9NT62 314 aa11.86□□□□□ -0.51
SOX9-AS1-210ENST00000533039 KDRP35968 1356 aa11.86□□□□□ -0.51
SOX9-AS1-210ENST00000533039 PHF14O94880 888 aa11.85□□□□□ -0.51
SOX9-AS1-210ENST00000533039 GPR162Q16538 588 aa11.85□□□□□ -0.51
SOX9-AS1-210ENST00000533039 MSL1Q68DK7 614 aa11.85□□□□□ -0.51
SOX9-AS1-210ENST00000533039 KDM6AO15550 1401 aaPredicted RBP11.85□□□□□ -0.51
SOX9-AS1-210ENST00000533039 NPC1L1Q9UHC9 1359 aa11.84□□□□□ -0.51
SOX9-AS1-210ENST00000533039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
SOX9-AS1-210ENST00000533039 SSFA2P28290 1259 aa11.84□□□□□ -0.51
SOX9-AS1-210ENST00000533039 LINC00116Q8NCU8 138 aa11.84□□□□□ -0.51
SOX9-AS1-210ENST00000533039 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
SOX9-AS1-210ENST00000533039 GNPATO15228 680 aa11.83□□□□□ -0.52
SOX9-AS1-210ENST00000533039 DIAPH1O60610 1272 aaKnown RBP11.83□□□□□ -0.52
SOX9-AS1-210ENST00000533039 CNGB1Q14028 1251 aaPredicted RBP11.83□□□□□ -0.52
SOX9-AS1-210ENST00000533039 PELP1Q8IZL8 1130 aaKnown RBP11.83□□□□□ -0.52
SOX9-AS1-210ENST00000533039 HMOX1P09601 288 aa11.82□□□□□ -0.52
SOX9-AS1-210ENST00000533039 ITPK1Q13572 414 aa11.82□□□□□ -0.52
SOX9-AS1-210ENST00000533039 AKAP4Q5JQC9 854 aa11.82□□□□□ -0.52
SOX9-AS1-210ENST00000533039 CICQ96RK0 1608 aaPredicted RBP11.82□□□□□ -0.52
SOX9-AS1-210ENST00000533039 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
SOX9-AS1-210ENST00000533039 C4AP0C0L4 1744 aa11.81□□□□□ -0.52
SOX9-AS1-210ENST00000533039 TJP1Q07157 1748 aa11.81□□□□□ -0.52
SOX9-AS1-210ENST00000533039 NFATC2IPQ8NCF5 419 aa11.81□□□□□ -0.52
SOX9-AS1-210ENST00000533039 NLGN2Q8NFZ4 835 aa11.81□□□□□ -0.52
SOX9-AS1-210ENST00000533039 RTCBQ9Y3I0 505 aaKnown RBP11.81□□□□□ -0.52
SOX9-AS1-210ENST00000533039 HOXD11P31277 338 aaPredicted RBP11.8□□□□□ -0.52
SOX9-AS1-210ENST00000533039 RC3H1Q5TC82 1133 aaKnown RBP11.8□□□□□ -0.52
SOX9-AS1-210ENST00000533039 SMIM5Q71RC9 77 aa11.8□□□□□ -0.52
SOX9-AS1-210ENST00000533039 AMIGO3Q86WK7 504 aa11.8□□□□□ -0.52
SOX9-AS1-210ENST00000533039 CD2APQ9Y5K6 639 aa11.8□□□□□ -0.52
SOX9-AS1-210ENST00000533039 ADAMTS7Q9UKP4 1686 aa11.8□□□□□ -0.52
SOX9-AS1-210ENST00000533039 PTCD1O75127 700 aaKnown RBP11.79□□□□□ -0.52
SOX9-AS1-210ENST00000533039 TRAPPC3LQ5T215 181 aa11.79□□□□□ -0.52
SOX9-AS1-210ENST00000533039 CFAP53Q96M91 514 aa11.79□□□□□ -0.52
SOX9-AS1-210ENST00000533039 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
SOX9-AS1-210ENST00000533039 KIF13BQ9NQT8 1826 aa11.79□□□□□ -0.52
SOX9-AS1-210ENST00000533039 COL3A1P02461 1466 aaPredicted RBP11.78□□□□□ -0.52
SOX9-AS1-210ENST00000533039 U2SURPO15042 1029 aaKnown RBP11.78□□□□□ -0.52
SOX9-AS1-210ENST00000533039 GRIN3BO60391 1043 aa11.78□□□□□ -0.52
SOX9-AS1-210ENST00000533039 SLC4A9Q96Q91 983 aa11.78□□□□□ -0.52
SOX9-AS1-210ENST00000533039 SLC52A2Q9HAB3 445 aa11.78□□□□□ -0.52
SOX9-AS1-210ENST00000533039 MRC1P22897 1456 aa11.77□□□□□ -0.52
SOX9-AS1-210ENST00000533039 UBR2Q8IWV8 1755 aa11.77□□□□□ -0.52
SOX9-AS1-210ENST00000533039 RNMTO43148 476 aaKnown RBP11.77□□□□□ -0.53
SOX9-AS1-210ENST00000533039 RFC4P35249 363 aa11.77□□□□□ -0.53
SOX9-AS1-210ENST00000533039 SIPA1L3O60292 1781 aaPredicted RBP11.77□□□□□ -0.53
SOX9-AS1-210ENST00000533039 RPS6KA4O75676 772 aa11.76□□□□□ -0.53
SOX9-AS1-210ENST00000533039 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
SOX9-AS1-210ENST00000533039 NLGN1Q8N2Q7 840 aa11.76□□□□□ -0.53
SOX9-AS1-210ENST00000533039 LGR6Q9HBX8 967 aa11.76□□□□□ -0.53
SOX9-AS1-210ENST00000533039 N4BP2Q86UW6 1770 aaPredicted RBP11.76□□□□□ -0.53
SOX9-AS1-210ENST00000533039 MMP10P09238 476 aa11.75□□□□□ -0.53
SOX9-AS1-210ENST00000533039 CRKLP46109 303 aaKnown RBP11.75□□□□□ -0.53
SOX9-AS1-210ENST00000533039 ZNF784Q8NCA9 323 aaPredicted RBP11.75□□□□□ -0.53
SOX9-AS1-210ENST00000533039 ARHGEF1Q92888 912 aaKnown RBP11.75□□□□□ -0.53
SOX9-AS1-210ENST00000533039 NUDCQ9Y266 331 aa11.75□□□□□ -0.53
SOX9-AS1-210ENST00000533039 YBX3P16989 372 aaKnown RBP eCLIP11.74□□□□□ -0.53
SOX9-AS1-210ENST00000533039 GAS2L2Q8NHY3 880 aa11.74□□□□□ -0.53
SOX9-AS1-210ENST00000533039 GNAT3A8MTJ3 354 aa11.73□□□□□ -0.53
SOX9-AS1-210ENST00000533039 KCPQ6ZWJ8 1503 aa11.73□□□□□ -0.53
SOX9-AS1-210ENST00000533039 TTC5Q8N0Z6 440 aa11.73□□□□□ -0.53
SOX9-AS1-210ENST00000533039 BRCA1P38398 1863 aaKnown RBP11.72□□□□□ -0.53
SOX9-AS1-210ENST00000533039 KIAA1551Q9HCM1 1747 aa11.72□□□□□ -0.53
SOX9-AS1-210ENST00000533039 GYS1P13807 737 aa11.72□□□□□ -0.53
SOX9-AS1-210ENST00000533039 TEFQ10587 303 aa11.72□□□□□ -0.53
SOX9-AS1-210ENST00000533039 SLC39A6Q13433 755 aa11.72□□□□□ -0.53
SOX9-AS1-210ENST00000533039 CCDC87Q9NVE4 849 aa11.72□□□□□ -0.53
SOX9-AS1-210ENST00000533039 PARP3Q9Y6F1 533 aa11.72□□□□□ -0.53
SOX9-AS1-210ENST00000533039 GOLGB1Q14789 3259 aaKnown RBP11.71□□□□□ -0.53
SOX9-AS1-210ENST00000533039 PPP2R1AP30153 589 aa11.71□□□□□ -0.53
SOX9-AS1-210ENST00000533039 DNAJC10Q8IXB1 793 aa11.71□□□□□ -0.53
SOX9-AS1-210ENST00000533039 VSIG10Q8N0Z9 540 aa11.71□□□□□ -0.53
SOX9-AS1-210ENST00000533039 DLG5Q8TDM6 1919 aa11.7□□□□□ -0.54
SOX9-AS1-210ENST00000533039 USP42Q9H9J4 1324 aaKnown RBP11.7□□□□□ -0.54
SOX9-AS1-210ENST00000533039 ZPR1O75312 459 aa11.7□□□□□ -0.54
SOX9-AS1-210ENST00000533039 U2AF1L5P0DN76 240 aaPredicted RBP11.7□□□□□ -0.54
SOX9-AS1-210ENST00000533039 CYP19A1P11511 503 aaPredicted RBP11.7□□□□□ -0.54
SOX9-AS1-210ENST00000533039 PRKAR2BP31323 418 aa11.7□□□□□ -0.54
SOX9-AS1-210ENST00000533039 TGFB2P61812 414 aa11.7□□□□□ -0.54
SOX9-AS1-210ENST00000533039 U2AF1Q01081 240 aaKnown RBP eCLIP11.7□□□□□ -0.54
SOX9-AS1-210ENST00000533039 INTS5Q6P9B9 1019 aaKnown RBP11.7□□□□□ -0.54
SOX9-AS1-210ENST00000533039 UTRNP46939 3433 aa11.7□□□□□ -0.54
SOX9-AS1-210ENST00000533039 AFDNP55196 1824 aaKnown RBP11.7□□□□□ -0.54
SOX9-AS1-210ENST00000533039 ARFGEF1Q9Y6D6 1849 aa11.7□□□□□ -0.54
SOX9-AS1-210ENST00000533039 STARD3NLO95772 234 aa11.69□□□□□ -0.54
SOX9-AS1-210ENST00000533039 RSPH6AQ9H0K4 717 aa11.69□□□□□ -0.54
SOX9-AS1-210ENST00000533039 WWC3Q9ULE0 1092 aa11.69□□□□□ -0.54
SOX9-AS1-210ENST00000533039 PXDNLA1KZ92 1463 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms