RNA–Protein interactions for RNA: ENST00000532785.1

LMO7-222, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-222ENST00000532785 GRIP2Q9C0E4 1043 aa13.53□□□□□ -0.24
LMO7-222ENST00000532785 RHOQP17081 205 aa13.52□□□□□ -0.25
LMO7-222ENST00000532785 PTSQ03393 145 aa13.52□□□□□ -0.25
LMO7-222ENST00000532785 GNASQ5JWF2 1037 aa13.52□□□□□ -0.25
LMO7-222ENST00000532785 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.52□□□□□ -0.25
LMO7-222ENST00000532785 KIAA1024Q9UPX6 916 aa13.52□□□□□ -0.25
LMO7-222ENST00000532785 SUPT5HO00267 1087 aaKnown RBP13.51□□□□□ -0.25
LMO7-222ENST00000532785 ZNF358Q9NW07 568 aa13.51□□□□□ -0.25
LMO7-222ENST00000532785 NXF1Q9UBU9 619 aaKnown RBP13.51□□□□□ -0.25
LMO7-222ENST00000532785 KANK4Q5T7N3 995 aaPredicted RBP13.5□□□□□ -0.25
LMO7-222ENST00000532785 HRH3Q9Y5N1 445 aa13.5□□□□□ -0.25
LMO7-222ENST00000532785 SMTNP53814 917 aa13.49□□□□□ -0.25
LMO7-222ENST00000532785 POU4F2Q12837 409 aa13.49□□□□□ -0.25
LMO7-222ENST00000532785 CDCA8Q53HL2 280 aa13.49□□□□□ -0.25
LMO7-222ENST00000532785 TAS1R3Q7RTX0 852 aa13.49□□□□□ -0.25
LMO7-222ENST00000532785 ZNF775Q96BV0 537 aaPredicted RBP13.49□□□□□ -0.25
LMO7-222ENST00000532785 FHDC1Q9C0D6 1143 aaPredicted RBP13.49□□□□□ -0.25
LMO7-222ENST00000532785 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 USP17L10C9JJH3 530 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 USP17L12C9JPN9 530 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 USP17L21D6R901 530 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 ZBTB7BO15156 539 aaPredicted RBP13.48□□□□□ -0.25
LMO7-222ENST00000532785 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 SIX5Q8N196 739 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 C1orf115Q9H7X2 142 aa13.48□□□□□ -0.25
LMO7-222ENST00000532785 FAM196BA6NMK8 535 aa13.47□□□□□ -0.25
LMO7-222ENST00000532785 CRTC2Q53ET0 693 aaPredicted RBP13.47□□□□□ -0.25
LMO7-222ENST00000532785 NBPF10Q6P3W6 841 aaKnown RBP13.47□□□□□ -0.25
LMO7-222ENST00000532785 NBPF15Q8N660 670 aa13.47□□□□□ -0.25
LMO7-222ENST00000532785 A6NJY4 79 aa13.46□□□□□ -0.25
LMO7-222ENST00000532785 SPATA31C2B4DYI2 1134 aa13.46□□□□□ -0.25
LMO7-222ENST00000532785 TERTO14746 1132 aaKnown RBP13.46□□□□□ -0.25
LMO7-222ENST00000532785 CCDC155Q8N6L0 562 aa13.46□□□□□ -0.25
LMO7-222ENST00000532785 SLC16A10Q8TF71 515 aa13.46□□□□□ -0.25
LMO7-222ENST00000532785 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.25
LMO7-222ENST00000532785 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.45□□□□□ -0.26
LMO7-222ENST00000532785 PHKA2P46019 1235 aa13.45□□□□□ -0.26
LMO7-222ENST00000532785 VEGFBP49765 207 aa13.45□□□□□ -0.26
LMO7-222ENST00000532785 PPARGC1BQ86YN6 1023 aaKnown RBP13.45□□□□□ -0.26
LMO7-222ENST00000532785 RHBDD1Q8TEB9 315 aa13.45□□□□□ -0.26
LMO7-222ENST00000532785 SFI1A8K8P3 1242 aa13.44□□□□□ -0.26
LMO7-222ENST00000532785 SEC13P55735 322 aa13.44□□□□□ -0.26
LMO7-222ENST00000532785 PTK7Q13308 1070 aa13.44□□□□□ -0.26
LMO7-222ENST00000532785 NPAS3Q8IXF0 933 aa13.44□□□□□ -0.26
LMO7-222ENST00000532785 TIMMDC1Q9NPL8 285 aa13.44□□□□□ -0.26
LMO7-222ENST00000532785 PPFIA3O75145 1194 aa13.43□□□□□ -0.26
LMO7-222ENST00000532785 DPYDQ12882 1025 aa13.43□□□□□ -0.26
LMO7-222ENST00000532785 WDR44Q5JSH3 913 aa13.43□□□□□ -0.26
LMO7-222ENST00000532785 ANKMY2Q8IV38 441 aa13.43□□□□□ -0.26
LMO7-222ENST00000532785 SLC35F4A4IF30 521 aa13.42□□□□□ -0.26
LMO7-222ENST00000532785 TNS4Q8IZW8 715 aa13.42□□□□□ -0.26
LMO7-222ENST00000532785 NIFKQ9BYG3 293 aaKnown RBP13.42□□□□□ -0.26
LMO7-222ENST00000532785 CDK2AP1O14519 115 aa13.41□□□□□ -0.26
LMO7-222ENST00000532785 MTFR1Q15390 333 aa13.41□□□□□ -0.26
LMO7-222ENST00000532785 C4orf17Q53FE4 359 aa13.41□□□□□ -0.26
LMO7-222ENST00000532785 PBXIP1Q96AQ6 731 aa13.41□□□□□ -0.26
LMO7-222ENST00000532785 GAS2L1Q99501 681 aaPredicted RBP13.41□□□□□ -0.26
LMO7-222ENST00000532785 PLA2G4AP47712 749 aa13.4□□□□□ -0.26
LMO7-222ENST00000532785 TSEN2Q8NCE0 465 aaKnown RBP13.4□□□□□ -0.26
LMO7-222ENST00000532785 ARID3AQ99856 593 aa13.4□□□□□ -0.26
LMO7-222ENST00000532785 CABP1Q9NZU7 370 aa13.4□□□□□ -0.26
LMO7-222ENST00000532785 DYRK1BQ9Y463 629 aa13.4□□□□□ -0.26
LMO7-222ENST00000532785 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
LMO7-222ENST00000532785 H3BM21 787 aa13.39□□□□□ -0.27
LMO7-222ENST00000532785 M0R2N6 131 aa13.39□□□□□ -0.27
LMO7-222ENST00000532785 RIPOR1Q6ZS17 1223 aa13.39□□□□□ -0.27
LMO7-222ENST00000532785 FAM200AQ8TCP9 573 aa13.39□□□□□ -0.27
LMO7-222ENST00000532785 HINFPQ9BQA5 517 aa13.39□□□□□ -0.27
LMO7-222ENST00000532785 SCHIP1Q9P0W5 487 aaPredicted RBP13.39□□□□□ -0.27
LMO7-222ENST00000532785 NOVA2Q9UNW9 492 aaKnown RBP13.39□□□□□ -0.27
LMO7-222ENST00000532785 WFS1O76024 890 aa13.38□□□□□ -0.27
LMO7-222ENST00000532785 DKK1O94907 266 aa13.37□□□□□ -0.27
LMO7-222ENST00000532785 ITGA6P23229 1130 aa13.37□□□□□ -0.27
LMO7-222ENST00000532785 SLC9A9Q8IVB4 645 aa13.37□□□□□ -0.27
LMO7-222ENST00000532785 A0A1B0GTH6 734 aa13.36□□□□□ -0.27
LMO7-222ENST00000532785 CDC14CA4D256 554 aa13.36□□□□□ -0.27
LMO7-222ENST00000532785 TBCELQ5QJ74 424 aa13.36□□□□□ -0.27
LMO7-222ENST00000532785 IRF7Q92985 503 aa13.36□□□□□ -0.27
LMO7-222ENST00000532785 AIDAQ96BJ3 306 aa13.36□□□□□ -0.27
LMO7-222ENST00000532785 IQSEC3Q9UPP2 1182 aaPredicted RBP13.36□□□□□ -0.27
LMO7-222ENST00000532785 CHMP3Q9Y3E7 222 aa13.36□□□□□ -0.27
LMO7-222ENST00000532785 EPHA4P54764 986 aa13.35□□□□□ -0.27
LMO7-222ENST00000532785 NFX1Q12986 1120 aaKnown RBP13.35□□□□□ -0.27
LMO7-222ENST00000532785 NBPF1Q3BBV0 1214 aa13.35□□□□□ -0.27
LMO7-222ENST00000532785 GPAMQ9HCL2 828 aa13.35□□□□□ -0.27
LMO7-222ENST00000532785 USP3Q9Y6I4 520 aa13.35□□□□□ -0.27
LMO7-222ENST00000532785 TREML4Q6UXN2 200 aa13.34□□□□□ -0.27
LMO7-222ENST00000532785 TSPAN10Q9H1Z9 355 aaPredicted RBP13.34□□□□□ -0.27
LMO7-222ENST00000532785 ZNF232Q9UNY5 417 aa13.34□□□□□ -0.27
LMO7-222ENST00000532785 ATG7O95352 703 aa13.33□□□□□ -0.28
LMO7-222ENST00000532785 F11P03951 625 aa13.33□□□□□ -0.28
LMO7-222ENST00000532785 FOXK2Q01167 660 aa13.33□□□□□ -0.28
LMO7-222ENST00000532785 ARXQ96QS3 562 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 429.3 ms