RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	TOM1L2	Q6ZVM7	507 aa		11.27	□□□□□ -0.61
PUM1-223	ENST00000532678	PTF1A	Q7RTS3	328 aa		11.27	□□□□□ -0.61
PUM1-223	ENST00000532678	OXER1	Q8TDS5	423 aa		11.27	□□□□□ -0.61
PUM1-223	ENST00000532678	KTN1	Q86UP2	1357 aa	Known RBP	11.27	□□□□□ -0.61
PUM1-223	ENST00000532678	CD163L1	Q9NR16	1453 aa		11.26	□□□□□ -0.61
PUM1-223	ENST00000532678	SLC24A1	O60721	1099 aa		11.26	□□□□□ -0.61
PUM1-223	ENST00000532678	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.26	□□□□□ -0.61	3e-6	■■■■□ 20.4
PUM1-223	ENST00000532678	THRAP3	Q9Y2W1	955 aa	Known RBP	11.26	□□□□□ -0.61
PUM1-223	ENST00000532678	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.26	□□□□□ -0.61
PUM1-223	ENST00000532678	RGPD4	Q7Z3J3	1758 aa		11.26	□□□□□ -0.61
PUM1-223	ENST00000532678	TESK2	Q96S53	571 aa		11.25	□□□□□ -0.61
PUM1-223	ENST00000532678	WDR17	Q8IZU2	1322 aa		11.25	□□□□□ -0.61
PUM1-223	ENST00000532678	PARD3	Q8TEW0	1356 aa		11.25	□□□□□ -0.61
PUM1-223	ENST00000532678	CSB-PGBD3	P0DP91	1061 aa		11.24	□□□□□ -0.61
PUM1-223	ENST00000532678	GPR153	Q6NV75	609 aa		11.24	□□□□□ -0.61
PUM1-223	ENST00000532678	ARHGEF25	Q86VW2	580 aa		11.24	□□□□□ -0.61
PUM1-223	ENST00000532678	NME9	Q86XW9	330 aa		11.24	□□□□□ -0.61
PUM1-223	ENST00000532678	TTC21A	Q8NDW8	1320 aa		11.24	□□□□□ -0.61
PUM1-223	ENST00000532678	TBC1D12	O60347	775 aa		11.23	□□□□□ -0.61
PUM1-223	ENST00000532678	HSPA5	P11021	654 aa	Known RBP	11.23	□□□□□ -0.61
PUM1-223	ENST00000532678	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
PUM1-223	ENST00000532678	DDB1	Q16531	1140 aa		11.23	□□□□□ -0.61
PUM1-223	ENST00000532678	ZNF710	Q8N1W2	664 aa		11.23	□□□□□ -0.61
PUM1-223	ENST00000532678	MARCH10	Q8NA82	808 aa	Predicted RBP	11.23	□□□□□ -0.61
PUM1-223	ENST00000532678	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.23	□□□□□ -0.61
PUM1-223	ENST00000532678	CASZ1	Q86V15	1759 aa		11.23	□□□□□ -0.61
PUM1-223	ENST00000532678	ABCC6	O95255	1503 aa		11.22	□□□□□ -0.61
PUM1-223	ENST00000532678	HOXB1	P14653	301 aa	Predicted RBP	11.22	□□□□□ -0.61
PUM1-223	ENST00000532678	MYOM1	P52179	1685 aa		11.22	□□□□□ -0.61
PUM1-223	ENST00000532678	TMC1	Q8TDI8	760 aa		11.22	□□□□□ -0.61
PUM1-223	ENST00000532678	EMILIN3	Q9NT22	766 aa		11.22	□□□□□ -0.61
PUM1-223	ENST00000532678	NHS	Q6T4R5	1651 aa		11.21	□□□□□ -0.61
PUM1-223	ENST00000532678	TNS2	Q63HR2	1409 aa		11.21	□□□□□ -0.61
PUM1-223	ENST00000532678		A0A1W2PP64	1363 aa		11.21	□□□□□ -0.61
PUM1-223	ENST00000532678	ST18	O60284	1047 aa		11.21	□□□□□ -0.61
PUM1-223	ENST00000532678	TMF1	P82094	1093 aa		11.21	□□□□□ -0.61
PUM1-223	ENST00000532678	KCNH5	Q8NCM2	988 aa		11.21	□□□□□ -0.61
PUM1-223	ENST00000532678	SLC12A5	Q9H2X9	1139 aa		11.21	□□□□□ -0.61
PUM1-223	ENST00000532678	PCDHGA4	Q9Y5G9	962 aa		11.21	□□□□□ -0.61
PUM1-223	ENST00000532678	USP31	Q70CQ4	1352 aa		11.19	□□□□□ -0.62
PUM1-223	ENST00000532678	LCE2D	Q5TA82	110 aa	Predicted RBP	11.19	□□□□□ -0.62
PUM1-223	ENST00000532678	NBPF14	Q5TI25	921 aa		11.19	□□□□□ -0.62
PUM1-223	ENST00000532678	ARHGEF1	Q92888	912 aa	Known RBP	11.19	□□□□□ -0.62
PUM1-223	ENST00000532678	CARD10	Q9BWT7	1032 aa		11.19	□□□□□ -0.62
PUM1-223	ENST00000532678	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.19	□□□□□ -0.62
PUM1-223	ENST00000532678	EDC4	Q6P2E9	1401 aa	Known RBP	11.18	□□□□□ -0.62
PUM1-223	ENST00000532678	RGPD2	P0DJD1	1756 aa		11.18	□□□□□ -0.62
PUM1-223	ENST00000532678	ERBB3	P21860	1342 aa		11.18	□□□□□ -0.62
PUM1-223	ENST00000532678	ACSBG1	Q96GR2	724 aa		11.18	□□□□□ -0.62
PUM1-223	ENST00000532678	BTAF1	O14981	1849 aa		11.18	□□□□□ -0.62
PUM1-223	ENST00000532678	CCDC7	Q96M83	1385 aa		11.17	□□□□□ -0.62
PUM1-223	ENST00000532678	NINL	Q9Y2I6	1382 aa		11.17	□□□□□ -0.62
PUM1-223	ENST00000532678	KCNQ2	O43526	872 aa		11.17	□□□□□ -0.62
PUM1-223	ENST00000532678	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.17	□□□□□ -0.62
PUM1-223	ENST00000532678	FAM163A	Q96GL9	167 aa	Predicted RBP	11.17	□□□□□ -0.62
PUM1-223	ENST00000532678	PUS7	Q96PZ0	661 aa	Known RBP	11.17	□□□□□ -0.62
PUM1-223	ENST00000532678	NLRP2	Q9NX02	1062 aa		11.17	□□□□□ -0.62
PUM1-223	ENST00000532678	CDCA8	Q53HL2	280 aa		11.16	□□□□□ -0.62
PUM1-223	ENST00000532678	KCNV2	Q8TDN2	545 aa		11.16	□□□□□ -0.62
PUM1-223	ENST00000532678	ANKRD24	Q8TF21	1146 aa		11.16	□□□□□ -0.62
PUM1-223	ENST00000532678	FAM208A	Q9UK61	1670 aa	Known RBP	11.16	□□□□□ -0.62
PUM1-223	ENST00000532678	BCL9	O00512	1426 aa		11.16	□□□□□ -0.62
PUM1-223	ENST00000532678	PAPPA	Q13219	1627 aa		11.16	□□□□□ -0.62
PUM1-223	ENST00000532678	DOT1L	Q8TEK3	1739 aa		11.15	□□□□□ -0.62
PUM1-223	ENST00000532678	SHANK3	Q9BYB0	1731 aa		11.15	□□□□□ -0.62
PUM1-223	ENST00000532678	KAT6B	Q8WYB5	2073 aa		11.15	□□□□□ -0.62
PUM1-223	ENST00000532678	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-223	ENST00000532678	EXOC5	O00471	708 aa		11.15	□□□□□ -0.62
PUM1-223	ENST00000532678	FBLN1	P23142	703 aa		11.15	□□□□□ -0.62
PUM1-223	ENST00000532678	ZEB1	P37275	1124 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-223	ENST00000532678	MAP3K9	P80192	1104 aa		11.15	□□□□□ -0.62
PUM1-223	ENST00000532678	ARSI	Q5FYB1	569 aa		11.15	□□□□□ -0.62
PUM1-223	ENST00000532678	LTV1	Q96GA3	475 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-223	ENST00000532678	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-223	ENST00000532678	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-223	ENST00000532678	PLSCR1	O15162	318 aa		11.14	□□□□□ -0.63
PUM1-223	ENST00000532678	ZBTB7A	O95365	584 aa		11.14	□□□□□ -0.63
PUM1-223	ENST00000532678	POLR3GL	Q9BT43	218 aa		11.14	□□□□□ -0.63
PUM1-223	ENST00000532678	SPON1	Q9HCB6	807 aa		11.14	□□□□□ -0.63
PUM1-223	ENST00000532678	ANKRD36B	Q8N2N9	1353 aa		11.14	□□□□□ -0.63
PUM1-223	ENST00000532678	C11orf95	C9JLR9	678 aa	Predicted RBP	11.13	□□□□□ -0.63
PUM1-223	ENST00000532678	TXNRD1	Q16881	649 aa		11.13	□□□□□ -0.63
PUM1-223	ENST00000532678	KIF20B	Q96Q89	1820 aa		11.13	□□□□□ -0.63
PUM1-223	ENST00000532678	TUBGCP6	Q96RT7	1819 aa		11.13	□□□□□ -0.63
PUM1-223	ENST00000532678	IL2RB	P14784	551 aa		11.12	□□□□□ -0.63
PUM1-223	ENST00000532678	PDIA6	Q15084	440 aa		11.12	□□□□□ -0.63
PUM1-223	ENST00000532678	TERF2IP	Q9NYB0	399 aa		11.12	□□□□□ -0.63
PUM1-223	ENST00000532678	MAP3K19	Q56UN5	1328 aa		11.11	□□□□□ -0.63
PUM1-223	ENST00000532678	MEGF6	O75095	1541 aa		11.11	□□□□□ -0.63
PUM1-223	ENST00000532678	DPYSL4	O14531	572 aa		11.11	□□□□□ -0.63
PUM1-223	ENST00000532678	KIF7	Q2M1P5	1343 aa		11.1	□□□□□ -0.63
PUM1-223	ENST00000532678	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.1	□□□□□ -0.63
PUM1-223	ENST00000532678	EVI5	O60447	810 aa		11.1	□□□□□ -0.63
PUM1-223	ENST00000532678	STK32B	Q9NY57	414 aa		11.1	□□□□□ -0.63
PUM1-223	ENST00000532678	PTGER2	P43116	358 aa		11.09	□□□□□ -0.63
PUM1-223	ENST00000532678	RRS1	Q15050	365 aa	Known RBP	11.09	□□□□□ -0.63
PUM1-223	ENST00000532678	SLC15A2	Q16348	729 aa		11.09	□□□□□ -0.63
PUM1-223	ENST00000532678	ZNF827	Q17R98	1081 aa		11.09	□□□□□ -0.63
PUM1-223	ENST00000532678	DDX54	Q8TDD1	881 aa	Known RBP	11.09	□□□□□ -0.63
PUM1-223	ENST00000532678	IP6K1	Q92551	441 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms