RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 CLSPNQ9HAW4 1339 aa23.6■■□□□ 1.37
CTSB-226ENST00000532656 KDRP35968 1356 aa23.58■■□□□ 1.37
CTSB-226ENST00000532656 HSPA5P11021 654 aaKnown RBP23.58■■□□□ 1.37
CTSB-226ENST00000532656 PANK3Q9H999 370 aa23.58■■□□□ 1.37
CTSB-226ENST00000532656 PLEKHG2Q9H7P9 1386 aa23.57■■□□□ 1.36
CTSB-226ENST00000532656 EIF4G2P78344 907 aaKnown RBP eCLIP23.57■■□□□ 1.36
CTSB-226ENST00000532656 ZNF526Q8TF50 670 aaPredicted RBP23.57■■□□□ 1.36
CTSB-226ENST00000532656 RBM42Q9BTD8 480 aaKnown RBP23.57■■□□□ 1.36
CTSB-226ENST00000532656 ADCY9O60503 1353 aa23.56■■□□□ 1.36
CTSB-226ENST00000532656 MMP10P09238 476 aa23.56■■□□□ 1.36
CTSB-226ENST00000532656 SLC4A9Q96Q91 983 aa23.56■■□□□ 1.36
CTSB-226ENST00000532656 GPBP1L1Q9HC44 474 aaPredicted RBP23.56■■□□□ 1.36
CTSB-226ENST00000532656 ERVV-2B6SEH9 535 aa23.55■■□□□ 1.36
CTSB-226ENST00000532656 ZNF530Q6P9A1 599 aaPredicted RBP23.55■■□□□ 1.36
CTSB-226ENST00000532656 DCAF5Q96JK2 942 aa23.55■■□□□ 1.36
CTSB-226ENST00000532656 CEP350Q5VT06 3117 aa23.54■■□□□ 1.36
CTSB-226ENST00000532656 KDM6AO15550 1401 aaPredicted RBP23.54■■□□□ 1.36
CTSB-226ENST00000532656 PLEKHO1Q53GL0 409 aaPredicted RBP23.54■■□□□ 1.36
CTSB-226ENST00000532656 RTCBQ9Y3I0 505 aaKnown RBP23.54■■□□□ 1.36
CTSB-226ENST00000532656 HSP90AB1P08238 724 aaKnown RBP23.53■■□□□ 1.36
CTSB-226ENST00000532656 TRAPPC3LQ5T215 181 aa23.53■■□□□ 1.36
CTSB-226ENST00000532656 ZNF831Q5JPB2 1677 aa23.53■■□□□ 1.36
CTSB-226ENST00000532656 COL5A3P25940 1745 aaPredicted RBP23.53■■□□□ 1.36
CTSB-226ENST00000532656 CICQ96RK0 1608 aaPredicted RBP23.52■■□□□ 1.36
CTSB-226ENST00000532656 CABP4P57796 275 aa23.51■■□□□ 1.35
CTSB-226ENST00000532656 MORC1Q86VD1 984 aa23.51■■□□□ 1.35
CTSB-226ENST00000532656 AEBP1Q8IUX7 1158 aa23.51■■□□□ 1.35
CTSB-226ENST00000532656 PXDNLA1KZ92 1463 aa23.5■■□□□ 1.35
CTSB-226ENST00000532656 KIF13BQ9NQT8 1826 aa23.5■■□□□ 1.35
CTSB-226ENST00000532656 AMOTQ4VCS5 1084 aa23.5■■□□□ 1.35
CTSB-226ENST00000532656 KIAA1551Q9HCM1 1747 aa23.5■■□□□ 1.35
CTSB-226ENST00000532656 N4BP2Q86UW6 1770 aaPredicted RBP23.5■■□□□ 1.35
CTSB-226ENST00000532656 RC3H1Q5TC82 1133 aaKnown RBP23.49■■□□□ 1.35
CTSB-226ENST00000532656 ARHGEF1Q92888 912 aaKnown RBP23.49■■□□□ 1.35
CTSB-226ENST00000532656 CNTNAP4Q9C0A0 1308 aa23.49■■□□□ 1.35
CTSB-226ENST00000532656 C1orf141Q5JVX7 400 aa23.48■■□□□ 1.35
CTSB-226ENST00000532656 NLGN1Q8N2Q7 840 aa23.48■■□□□ 1.35
CTSB-226ENST00000532656 PTCD1O75127 700 aaKnown RBP23.47■■□□□ 1.35
CTSB-226ENST00000532656 ADRA2BP18089 450 aa23.47■■□□□ 1.35
CTSB-226ENST00000532656 MTHFSP49914 203 aa23.47■■□□□ 1.35
CTSB-226ENST00000532656 C4AP0C0L4 1744 aa23.47■■□□□ 1.35
CTSB-226ENST00000532656 MYH14Q7Z406 1995 aaKnown RBP23.47■■□□□ 1.35
CTSB-226ENST00000532656 RPS6KA4O75676 772 aa23.46■■□□□ 1.35
CTSB-226ENST00000532656 GYS1P13807 737 aa23.46■■□□□ 1.35
CTSB-226ENST00000532656 RFC4P35249 363 aa23.46■■□□□ 1.35
CTSB-226ENST00000532656 SULT6B1Q6IMI4 303 aa23.46■■□□□ 1.35
CTSB-226ENST00000532656 C10orf71Q711Q0 1435 aa23.46■■□□□ 1.35
CTSB-226ENST00000532656 A0A0G2JLW4 131 aa23.45■■□□□ 1.34
CTSB-226ENST00000532656 TGFB2P61812 414 aa23.44■■□□□ 1.34
CTSB-226ENST00000532656 NFATC2IPQ8NCF5 419 aa23.44■■□□□ 1.34
CTSB-226ENST00000532656 BCS1LQ9Y276 419 aa23.44■■□□□ 1.34
CTSB-226ENST00000532656 CCDC87Q9NVE4 849 aa23.43■■□□□ 1.34
CTSB-226ENST00000532656 KNSTRNQ9Y448 316 aa23.43■■□□□ 1.34
CTSB-226ENST00000532656 CRKLP46109 303 aaKnown RBP23.42■■□□□ 1.34
CTSB-226ENST00000532656 PARP3Q9Y6F1 533 aa23.42■■□□□ 1.34
CTSB-226ENST00000532656 IL13P35225 146 aa23.41■■□□□ 1.34
CTSB-226ENST00000532656 TJP1Q07157 1748 aa23.41■■□□□ 1.34
CTSB-226ENST00000532656 SCN11AQ9UI33 1791 aa23.4■■□□□ 1.34
CTSB-226ENST00000532656 DPEP1P16444 411 aa23.4■■□□□ 1.34
CTSB-226ENST00000532656 SRP68Q9UHB9 627 aaKnown RBP23.4■■□□□ 1.34
CTSB-226ENST00000532656 HSPA6P17066 643 aa23.39■■□□□ 1.33
CTSB-226ENST00000532656 CCER1Q8TC90 406 aaPredicted RBP23.39■■□□□ 1.33
CTSB-226ENST00000532656 KIF3CO14782 793 aa23.38■■□□□ 1.33
CTSB-226ENST00000532656 BRCA1P38398 1863 aaKnown RBP23.38■■□□□ 1.33
CTSB-226ENST00000532656 FCHSD2O94868 740 aa23.37■■□□□ 1.33
CTSB-226ENST00000532656 ARHGAP27Q6ZUM4 889 aa23.37■■□□□ 1.33
CTSB-226ENST00000532656 USP42Q9H9J4 1324 aaKnown RBP23.36■■□□□ 1.33
CTSB-226ENST00000532656 FKBP8Q14318 412 aa23.36■■□□□ 1.33
CTSB-226ENST00000532656 AKAP4Q5JQC9 854 aa23.35■■□□□ 1.33
CTSB-226ENST00000532656 AMER1Q5JTC6 1135 aaPredicted RBP23.35■■□□□ 1.33
CTSB-226ENST00000532656 KCNA3P22001 575 aa23.34■■□□□ 1.33
CTSB-226ENST00000532656 LGR6Q9HBX8 967 aa23.34■■□□□ 1.33
CTSB-226ENST00000532656 HMOX1P09601 288 aa23.33■■□□□ 1.33
CTSB-226ENST00000532656 DDR1Q08345 913 aa23.33■■□□□ 1.33
CTSB-226ENST00000532656 INTS5Q6P9B9 1019 aaKnown RBP23.33■■□□□ 1.33
CTSB-226ENST00000532656 SLC52A2Q9HAB3 445 aa23.33■■□□□ 1.33
CTSB-226ENST00000532656 ADAMTS7Q9UKP4 1686 aa23.32■■□□□ 1.32
CTSB-226ENST00000532656 DNAJC10Q8IXB1 793 aa23.32■■□□□ 1.32
CTSB-226ENST00000532656 ARFGEF1Q9Y6D6 1849 aa23.31■■□□□ 1.32
CTSB-226ENST00000532656 VIRMAQ69YN4 1812 aaKnown RBP23.31■■□□□ 1.32
CTSB-226ENST00000532656 KIF7Q2M1P5 1343 aa23.31■■□□□ 1.32
CTSB-226ENST00000532656 MRC1P22897 1456 aa23.3■■□□□ 1.32
CTSB-226ENST00000532656 RNMTO43148 476 aaKnown RBP23.3■■□□□ 1.32
CTSB-226ENST00000532656 SLC39A6Q13433 755 aa23.3■■□□□ 1.32
CTSB-226ENST00000532656 PIM2Q9P1W9 311 aa23.3■■□□□ 1.32
CTSB-226ENST00000532656 POLRMTO00411 1230 aaKnown RBP23.28■■□□□ 1.32
CTSB-226ENST00000532656 ZPR1O75312 459 aa23.28■■□□□ 1.32
CTSB-226ENST00000532656 USPL1Q5W0Q7 1092 aa23.28■■□□□ 1.32
CTSB-226ENST00000532656 NMRK2Q9NPI5 230 aa23.28■■□□□ 1.32
CTSB-226ENST00000532656 CHRNA5P30532 468 aa23.27■■□□□ 1.32
CTSB-226ENST00000532656 C9orf131Q5VYM1 1079 aa23.27■■□□□ 1.32
CTSB-226ENST00000532656 KCPQ6ZWJ8 1503 aa23.27■■□□□ 1.32
CTSB-226ENST00000532656 SOS1Q07889 1333 aaPredicted RBP23.27■■□□□ 1.32
CTSB-226ENST00000532656 CYP19A1P11511 503 aaPredicted RBP23.26■■□□□ 1.31
CTSB-226ENST00000532656 TM4SF1P30408 202 aa23.26■■□□□ 1.31
CTSB-226ENST00000532656 MTHFSDQ2M296 383 aaKnown RBP23.26■■□□□ 1.31
CTSB-226ENST00000532656 DALRD3Q5D0E6 543 aaKnown RBP23.26■■□□□ 1.31
CTSB-226ENST00000532656 CC2D1BQ5T0F9 858 aaKnown RBP23.26■■□□□ 1.31
CTSB-226ENST00000532656 TOMM70O94826 608 aa23.25■■□□□ 1.31
CTSB-226ENST00000532656 DIAPH1O60610 1272 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms