RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 PSMD1Q99460 953 aa9.41□□□□□ -0.9
CTNND1-231ENST00000532463 PPFIA2O75334 1257 aa9.41□□□□□ -0.9
CTNND1-231ENST00000532463 CACNA2D3Q8IZS8 1091 aa9.41□□□□□ -0.9
CTNND1-231ENST00000532463 TSG101Q99816 390 aa9.41□□□□□ -0.9
CTNND1-231ENST00000532463 FGFR1OPO95684 399 aaKnown RBP9.41□□□□□ -0.9
CTNND1-231ENST00000532463 PDE1CQ14123 709 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-231ENST00000532463 CCDC96Q2M329 555 aa9.41□□□□□ -0.9
CTNND1-231ENST00000532463 CCDC77Q9BR77 488 aa9.41□□□□□ -0.9
CTNND1-231ENST00000532463 OPA1O60313 960 aa9.4□□□□□ -0.9
CTNND1-231ENST00000532463 RASSF4Q9H2L5 321 aa9.4□□□□□ -0.9
CTNND1-231ENST00000532463 SH3BGRP55822 239 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-231ENST00000532463 AIMP1Q12904 312 aaKnown RBP9.4□□□□□ -0.9
CTNND1-231ENST00000532463 CEP131Q9UPN4 1083 aa9.4□□□□□ -0.9
CTNND1-231ENST00000532463 GMNNO75496 209 aa9.4□□□□□ -0.9
CTNND1-231ENST00000532463 FLIIQ13045 1269 aa9.4□□□□□ -0.9
CTNND1-231ENST00000532463 MAP7Q14244 749 aa9.4□□□□□ -0.9
CTNND1-231ENST00000532463 CCDC114Q96M63 670 aa9.4□□□□□ -0.9
CTNND1-231ENST00000532463 TSPYL2Q9H2G4 693 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-231ENST00000532463 ANO10Q9NW15 660 aa9.4□□□□□ -0.9
CTNND1-231ENST00000532463 MCM5P33992 734 aa9.4□□□□□ -0.9
CTNND1-231ENST00000532463 GSDMDP57764 484 aa9.4□□□□□ -0.9
CTNND1-231ENST00000532463 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.4□□□□□ -0.96e-14■□□□□ 9.9
CTNND1-231ENST00000532463 PPP6R1Q9UPN7 881 aa9.4□□□□□ -0.9
CTNND1-231ENST00000532463 CCDC69A6NI79 296 aa9.4□□□□□ -0.91
CTNND1-231ENST00000532463 SPDYE4A6NLX3 237 aa9.4□□□□□ -0.91
CTNND1-231ENST00000532463 K7ELQ4 463 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-231ENST00000532463 PLCD3Q8N3E9 789 aa9.4□□□□□ -0.91
CTNND1-231ENST00000532463 STMN2Q93045 179 aa9.4□□□□□ -0.91
CTNND1-231ENST00000532463 LRRC45Q96CN5 670 aa9.4□□□□□ -0.91
CTNND1-231ENST00000532463 PRIMPOLQ96LW4 560 aa9.4□□□□□ -0.91
CTNND1-231ENST00000532463 UBTFL1P0CB47 393 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-231ENST00000532463 DNA2P51530 1060 aa9.39□□□□□ -0.91
CTNND1-231ENST00000532463 PRR16Q569H4 304 aa9.39□□□□□ -0.91
CTNND1-231ENST00000532463 SH2D4BQ5SQS7 431 aa9.39□□□□□ -0.91
CTNND1-231ENST00000532463 PRKRIP1Q9H875 184 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-231ENST00000532463 A0A1B0GUL7 405 aa9.39□□□□□ -0.91
CTNND1-231ENST00000532463 MVPQ14764 893 aaKnown RBP9.39□□□□□ -0.91
CTNND1-231ENST00000532463 SF3B2Q13435 895 aaKnown RBP9.39□□□□□ -0.91
CTNND1-231ENST00000532463 KIAA0753Q2KHM9 967 aa9.39□□□□□ -0.91
CTNND1-231ENST00000532463 ZSCAN31Q96LW9 406 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-231ENST00000532463 PAXBP1Q9Y5B6 917 aa9.39□□□□□ -0.91
CTNND1-231ENST00000532463 WASHC2AQ641Q2 1341 aa9.39□□□□□ -0.91
CTNND1-231ENST00000532463 VPS8Q8N3P4 1428 aa9.39□□□□□ -0.91
CTNND1-231ENST00000532463 TDRD12Q587J7 1177 aaKnown RBP9.39□□□□□ -0.91
CTNND1-231ENST00000532463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.39□□□□□ -0.912e-8■□□□□ 11.3
CTNND1-231ENST00000532463 EHBP1Q8NDI1 1231 aa9.39□□□□□ -0.91
CTNND1-231ENST00000532463 SMC1BQ8NDV3 1235 aa9.39□□□□□ -0.91
CTNND1-231ENST00000532463 WASF1Q92558 559 aa9.39□□□□□ -0.91
CTNND1-231ENST00000532463 NACAP1Q9BZK3 213 aa9.39□□□□□ -0.91
CTNND1-231ENST00000532463 CCDC150Q8NCX0 1101 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 PCK1P35558 622 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 ARL1P40616 181 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-231ENST00000532463 CLIP2Q9UDT6 1046 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 PRC1O43663 620 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 CIB2O75838 187 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 CLNS1AP54105 237 aaKnown RBP9.38□□□□□ -0.91
CTNND1-231ENST00000532463 KIF20AO95235 890 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 MCM4P33991 863 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 MLECQ14165 292 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 CTAGE6Q86UF2 777 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 PLVAPQ9BX97 442 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 SRRTQ9BXP5 876 aaKnown RBP9.38□□□□□ -0.91
CTNND1-231ENST00000532463 ARFGAP3Q9NP61 516 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 MRVI1Q9Y6F6 885 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 CCDC171Q6TFL3 1326 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 SATB1Q01826 763 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 PIBF1Q8WXW3 757 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 NUP88Q99567 741 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-231ENST00000532463 ARHGAP35Q9NRY4 1499 aa9.38□□□□□ -0.91
CTNND1-231ENST00000532463 CAPN2P17655 700 aa9.37□□□□□ -0.91
CTNND1-231ENST00000532463 ERCC3P19447 782 aa9.37□□□□□ -0.91
CTNND1-231ENST00000532463 XPCQ01831 940 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-231ENST00000532463 KIF5AQ12840 1032 aa9.37□□□□□ -0.91
CTNND1-231ENST00000532463 IFI16Q16666 785 aaKnown RBP9.37□□□□□ -0.91
CTNND1-231ENST00000532463 MIER3Q7Z3K6 550 aa9.37□□□□□ -0.91
CTNND1-231ENST00000532463 COG3Q96JB2 828 aa9.37□□□□□ -0.91
CTNND1-231ENST00000532463 C16orf45Q96MC5 204 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-231ENST00000532463 NUF2Q9BZD4 464 aa9.37□□□□□ -0.91
CTNND1-231ENST00000532463 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.37□□□□□ -0.911e-7■■■□□ 16.3
CTNND1-231ENST00000532463 VCXQ9H320 206 aa9.37□□□□□ -0.91
CTNND1-231ENST00000532463 ALDH3A1P30838 453 aa9.37□□□□□ -0.91
CTNND1-231ENST00000532463 PRPF4BQ13523 1007 aaKnown RBP9.37□□□□□ -0.91
CTNND1-231ENST00000532463 ARFGAP2Q8N6H7 521 aa9.37□□□□□ -0.91
CTNND1-231ENST00000532463 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.37□□□□□ -0.917e-6■□□□□ 8.3
CTNND1-231ENST00000532463 ZC4H2Q9NQZ6 224 aa9.37□□□□□ -0.91
CTNND1-231ENST00000532463 SNW1Q13573 536 aaKnown RBP9.37□□□□□ -0.91
CTNND1-231ENST00000532463 NAA16Q6N069 864 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-231ENST00000532463 RIC3Q7Z5B4 369 aa9.37□□□□□ -0.91
CTNND1-231ENST00000532463 FERMT2Q96AC1 680 aa9.37□□□□□ -0.91
CTNND1-231ENST00000532463 ZNF76P36508 570 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 GNAI1P63096 354 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 MRPS9P82933 396 aaKnown RBP9.36□□□□□ -0.91
CTNND1-231ENST00000532463 ATP11AP98196 1134 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 WDR63Q8IWG1 891 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 DDX27Q96GQ7 796 aaKnown RBP9.36□□□□□ -0.91
CTNND1-231ENST00000532463 GNAI3P08754 354 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 CETN1Q12798 172 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 STK3Q13188 491 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 KIAA1524Q8TCG1 905 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 IFT74Q96LB3 600 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms