RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 DUSP27Q5VZP5 1158 aa23.41■■□□□ 1.34
PPP1CA-208ENST00000532446 ITGB4P16144 1822 aa23.4■■□□□ 1.34
PPP1CA-208ENST00000532446 CHL1O00533 1208 aa23.4■■□□□ 1.34
PPP1CA-208ENST00000532446 MYH16Q9H6N6 1097 aa23.4■■□□□ 1.34
PPP1CA-208ENST00000532446 SLC52A2Q9HAB3 445 aa23.4■■□□□ 1.34
PPP1CA-208ENST00000532446 LAS1LQ9Y4W2 734 aaKnown RBP23.4■■□□□ 1.34
PPP1CA-208ENST00000532446 KAT6BQ8WYB5 2073 aa23.4■■□□□ 1.34
PPP1CA-208ENST00000532446 DOT1LQ8TEK3 1739 aa23.39■■□□□ 1.33
PPP1CA-208ENST00000532446 BABAM1Q9NWV8 329 aa23.38■■□□□ 1.33
PPP1CA-208ENST00000532446 NFATC2IPQ8NCF5 419 aa23.37■■□□□ 1.33
PPP1CA-208ENST00000532446 TSR2Q969E8 191 aaKnown RBP23.37■■□□□ 1.33
PPP1CA-208ENST00000532446 MBIPQ9NS73 344 aa23.37■■□□□ 1.33
PPP1CA-208ENST00000532446 FANCIQ9NVI1 1328 aa23.37■■□□□ 1.33
PPP1CA-208ENST00000532446 KDM3BQ7LBC6 1761 aa23.37■■□□□ 1.33
PPP1CA-208ENST00000532446 CABP4P57796 275 aa23.36■■□□□ 1.33
PPP1CA-208ENST00000532446 BCL9O00512 1426 aa23.36■■□□□ 1.33
PPP1CA-208ENST00000532446 MIS18AQ9NYP9 233 aa23.36■■□□□ 1.33
PPP1CA-208ENST00000532446 TSPYL4Q9UJ04 414 aa23.35■■□□□ 1.33
PPP1CA-208ENST00000532446 KRT27Q7Z3Y8 459 aa23.34■■□□□ 1.33
PPP1CA-208ENST00000532446 BTBD11A6QL63 1104 aa23.33■■□□□ 1.33
PPP1CA-208ENST00000532446 CENPBP07199 599 aaPredicted RBP23.33■■□□□ 1.33
PPP1CA-208ENST00000532446 SBF2Q86WG5 1849 aa23.33■■□□□ 1.33
PPP1CA-208ENST00000532446 PRIM1P49642 420 aaKnown RBP23.31■■□□□ 1.32
PPP1CA-208ENST00000532446 FAM182BQ5T319 152 aa23.31■■□□□ 1.32
PPP1CA-208ENST00000532446 TMOD3Q9NYL9 352 aa23.31■■□□□ 1.32
PPP1CA-208ENST00000532446 PAPPAQ13219 1627 aa23.31■■□□□ 1.32
PPP1CA-208ENST00000532446 CCDC125Q86Z20 511 aa23.3■■□□□ 1.32
PPP1CA-208ENST00000532446 PIGBQ92521 554 aa23.3■■□□□ 1.32
PPP1CA-208ENST00000532446 EP400Q96L91 3159 aa23.3■■□□□ 1.32
PPP1CA-208ENST00000532446 KCNQ3O43525 872 aa23.29■■□□□ 1.32
PPP1CA-208ENST00000532446 EXOSC9Q06265 439 aaKnown RBP23.29■■□□□ 1.32
PPP1CA-208ENST00000532446 ACSBG1Q96GR2 724 aa23.29■■□□□ 1.32
PPP1CA-208ENST00000532446 NHSQ6T4R5 1651 aa23.29■■□□□ 1.32
PPP1CA-208ENST00000532446 ZNF790Q6PG37 636 aa23.28■■□□□ 1.32
PPP1CA-208ENST00000532446 UBR2Q8IWV8 1755 aa23.27■■□□□ 1.32
PPP1CA-208ENST00000532446 SLC39A6Q13433 755 aa23.27■■□□□ 1.32
PPP1CA-208ENST00000532446 SYTL4Q96C24 671 aaPredicted RBP23.27■■□□□ 1.32
PPP1CA-208ENST00000532446 EIF4A1P60842 406 aaKnown RBP23.26■■□□□ 1.31
PPP1CA-208ENST00000532446 FAM196AQ6ZSG2 479 aa23.26■■□□□ 1.31
PPP1CA-208ENST00000532446 KCNQ2O43526 872 aa23.25■■□□□ 1.31
PPP1CA-208ENST00000532446 C8orf58Q8NAV2 365 aa23.25■■□□□ 1.31
PPP1CA-208ENST00000532446 KRT24Q2M2I5 525 aa23.24■■□□□ 1.31
PPP1CA-208ENST00000532446 TSPYL6Q8N831 410 aa23.24■■□□□ 1.31
PPP1CA-208ENST00000532446 HEG1Q9ULI3 1381 aa23.23■■□□□ 1.31
PPP1CA-208ENST00000532446 CT47B1P0C2W7 299 aaPredicted RBP23.23■■□□□ 1.31
PPP1CA-208ENST00000532446 TTC5Q8N0Z6 440 aa23.23■■□□□ 1.31
PPP1CA-208ENST00000532446 ATG3Q9NT62 314 aa23.23■■□□□ 1.31
PPP1CA-208ENST00000532446 ASAP1Q9ULH1 1129 aa23.23■■□□□ 1.31
PPP1CA-208ENST00000532446 BTAF1O14981 1849 aa23.23■■□□□ 1.31
PPP1CA-208ENST00000532446 KCPQ6ZWJ8 1503 aa23.22■■□□□ 1.31
PPP1CA-208ENST00000532446 TWISTNBQ3B726 338 aaPredicted RBP23.21■■□□□ 1.31
PPP1CA-208ENST00000532446 ZNF496Q96IT1 587 aaPredicted RBP23.21■■□□□ 1.31
PPP1CA-208ENST00000532446 ELL2O00472 640 aaPredicted RBP23.2■■□□□ 1.3
PPP1CA-208ENST00000532446 VAMP4O75379 141 aa23.2■■□□□ 1.3
PPP1CA-208ENST00000532446 PTF1AQ7RTS3 328 aa23.2■■□□□ 1.3
PPP1CA-208ENST00000532446 FMNL2Q96PY5 1086 aa23.19■■□□□ 1.3
PPP1CA-208ENST00000532446 SOS1Q07889 1333 aaPredicted RBP23.19■■□□□ 1.3
PPP1CA-208ENST00000532446 BCL11BQ9C0K0 894 aaPredicted RBP23.18■■□□□ 1.3
PPP1CA-208ENST00000532446 GIGYF1O75420 1035 aaPredicted RBP23.17■■□□□ 1.3
PPP1CA-208ENST00000532446 HOXB7P09629 217 aa23.17■■□□□ 1.3
PPP1CA-208ENST00000532446 RCAN3Q9UKA8 241 aa23.17■■□□□ 1.3
PPP1CA-208ENST00000532446 C5P01031 1676 aa23.17■■□□□ 1.3
PPP1CA-208ENST00000532446 ZNF428Q96B54 188 aa23.17■■□□□ 1.3
PPP1CA-208ENST00000532446 PTCD1O75127 700 aaKnown RBP23.16■■□□□ 1.3
PPP1CA-208ENST00000532446 SMARCC1Q92922 1105 aaPredicted RBP23.16■■□□□ 1.3
PPP1CA-208ENST00000532446 TRIM37O94972 964 aa23.14■■□□□ 1.29
PPP1CA-208ENST00000532446 SNRPA1P09661 255 aaKnown RBP23.14■■□□□ 1.29
PPP1CA-208ENST00000532446 RARSP54136 660 aaKnown RBP23.14■■□□□ 1.29
PPP1CA-208ENST00000532446 SF3B2Q13435 895 aaKnown RBP23.14■■□□□ 1.29
PPP1CA-208ENST00000532446 LAMB4A4D0S4 1761 aa23.14■■□□□ 1.29
PPP1CA-208ENST00000532446 PALLDQ8WX93 1383 aa23.13■■□□□ 1.29
PPP1CA-208ENST00000532446 PRAMEF22A3QJZ6 481 aa23.13■■□□□ 1.29
PPP1CA-208ENST00000532446 VSIG10Q8N0Z9 540 aa23.13■■□□□ 1.29
PPP1CA-208ENST00000532446 RBM42Q9BTD8 480 aaKnown RBP23.12■■□□□ 1.29
PPP1CA-208ENST00000532446 CACNA1FO60840 1977 aa23.12■■□□□ 1.29
PPP1CA-208ENST00000532446 LY75O60449 1722 aa23.12■■□□□ 1.29
PPP1CA-208ENST00000532446 ZNF831Q5JPB2 1677 aa23.11■■□□□ 1.29
PPP1CA-208ENST00000532446 ALDH1L2Q3SY69 923 aa23.11■■□□□ 1.29
PPP1CA-208ENST00000532446 SLC4A9Q96Q91 983 aa23.11■■□□□ 1.29
PPP1CA-208ENST00000532446 CICQ96RK0 1608 aaPredicted RBP23.11■■□□□ 1.29
PPP1CA-208ENST00000532446 TJP1Q07157 1748 aa23.1■■□□□ 1.29
PPP1CA-208ENST00000532446 HDGFL1Q5TGJ6 251 aa23.1■■□□□ 1.29
PPP1CA-208ENST00000532446 SSH1Q8WYL5 1049 aa23.1■■□□□ 1.29
PPP1CA-208ENST00000532446 TNS1Q9HBL0 1735 aaKnown RBP23.09■■□□□ 1.29
PPP1CA-208ENST00000532446 LOC102724428A0A0B4J2F2 783 aa23.09■■□□□ 1.29
PPP1CA-208ENST00000532446 SIK1P57059 783 aa23.09■■□□□ 1.29
PPP1CA-208ENST00000532446 DEFB132Q7Z7B7 95 aa23.09■■□□□ 1.29
PPP1CA-208ENST00000532446 CHMP4AQ9BY43 222 aa23.09■■□□□ 1.29
PPP1CA-208ENST00000532446 USP16Q9Y5T5 823 aa23.09■■□□□ 1.29
PPP1CA-208ENST00000532446 BCAR3O75815 825 aa23.08■■□□□ 1.29
PPP1CA-208ENST00000532446 EIF2S2P20042 333 aaKnown RBP23.08■■□□□ 1.29
PPP1CA-208ENST00000532446 CCDC30Q5VVM6 783 aa23.08■■□□□ 1.29
PPP1CA-208ENST00000532446 NECTIN2Q92692 538 aa23.07■■□□□ 1.28
PPP1CA-208ENST00000532446 BCL2L13Q9BXK5 485 aa23.07■■□□□ 1.28
PPP1CA-208ENST00000532446 TEX13AQ9BXU3 409 aaPredicted RBP23.07■■□□□ 1.28
PPP1CA-208ENST00000532446 TCERG1O14776 1098 aaKnown RBP23.06■■□□□ 1.28
PPP1CA-208ENST00000532446 SMC4Q9NTJ3 1288 aa23.06■■□□□ 1.28
PPP1CA-208ENST00000532446 BRPF1P55201 1214 aaPredicted RBP23.05■■□□□ 1.28
PPP1CA-208ENST00000532446 DNAJC10Q8IXB1 793 aa23.05■■□□□ 1.28
PPP1CA-208ENST00000532446 MRPL50Q8N5N7 158 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms