RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 SBF1O95248 1867 aa27.65■■■□□ 2.02
PTP4A2-214ENST00000532289 LOC102724428A0A0B4J2F2 783 aa27.64■■■□□ 2.02
PTP4A2-214ENST00000532289 CYP27B1O15528 508 aa27.64■■■□□ 2.02
PTP4A2-214ENST00000532289 SIK1P57059 783 aa27.64■■■□□ 2.02
PTP4A2-214ENST00000532289 RTL1A6NKG5 1358 aa27.63■■■□□ 2.01
PTP4A2-214ENST00000532289 KCNA3P22001 575 aa27.63■■■□□ 2.01
PTP4A2-214ENST00000532289 C4AP0C0L4 1744 aa27.62■■■□□ 2.01
PTP4A2-214ENST00000532289 COG3Q96JB2 828 aa27.62■■■□□ 2.01
PTP4A2-214ENST00000532289 NLGN1Q8N2Q7 840 aa27.61■■■□□ 2.01
PTP4A2-214ENST00000532289 RNF181Q9P0P0 153 aa27.61■■■□□ 2.01
PTP4A2-214ENST00000532289 ITPK1Q13572 414 aa27.6■■■□□ 2.01
PTP4A2-214ENST00000532289 CCDC87Q9NVE4 849 aa27.6■■■□□ 2.01
PTP4A2-214ENST00000532289 DCAF5Q96JK2 942 aa27.59■■■□□ 2.01
PTP4A2-214ENST00000532289 TMF1P82094 1093 aa27.58■■■□□ 2.01
PTP4A2-214ENST00000532289 SMG6Q86US8 1419 aaKnown RBP27.57■■■□□ 2
PTP4A2-214ENST00000532289 PIM2Q9P1W9 311 aa27.56■■■□□ 2
PTP4A2-214ENST00000532289 ATP6V1AP38606 617 aa27.55■■■□□ 2
PTP4A2-214ENST00000532289 RRS1Q15050 365 aaKnown RBP27.54■■■□□ 2
PTP4A2-214ENST00000532289 NKX1-1Q15270 411 aaPredicted RBP27.54■■■□□ 2
PTP4A2-214ENST00000532289 TRAPPC3LQ5T215 181 aa27.54■■■□□ 2
PTP4A2-214ENST00000532289 DALRD3Q5D0E6 543 aaKnown RBP27.53■■■□□ 2
PTP4A2-214ENST00000532289 PCDH10Q9P2E7 1040 aa27.52■■■□□ 2
PTP4A2-214ENST00000532289 ASAP1Q9ULH1 1129 aa27.52■■■□□ 2
PTP4A2-214ENST00000532289 RTCBQ9Y3I0 505 aaKnown RBP27.51■■□□□ 1.99
PTP4A2-214ENST00000532289 PARP3Q9Y6F1 533 aa27.51■■□□□ 1.99
PTP4A2-214ENST00000532289 GYS1P13807 737 aa27.5■■□□□ 1.99
PTP4A2-214ENST00000532289 ZC3H4Q9UPT8 1303 aaKnown RBP27.49■■□□□ 1.99
PTP4A2-214ENST00000532289 VEGFAP15692 232 aaPredicted RBP27.49■■□□□ 1.99
PTP4A2-214ENST00000532289 ARHGEF1Q92888 912 aaKnown RBP27.49■■□□□ 1.99
PTP4A2-214ENST00000532289 PUS7Q96PZ0 661 aaKnown RBP27.49■■□□□ 1.99
PTP4A2-214ENST00000532289 INSRP06213 1382 aa27.48■■□□□ 1.99
PTP4A2-214ENST00000532289 HSP90AB2PQ58FF8 381 aa27.47■■□□□ 1.99
PTP4A2-214ENST00000532289 TMOD3Q9NYL9 352 aa27.47■■□□□ 1.99
PTP4A2-214ENST00000532289 ADRA2BP18089 450 aa27.46■■□□□ 1.99
PTP4A2-214ENST00000532289 KDM6AO15550 1401 aaPredicted RBP27.46■■□□□ 1.99
PTP4A2-214ENST00000532289 ZNF831Q5JPB2 1677 aa27.45■■□□□ 1.98
PTP4A2-214ENST00000532289 GLTPD2A6NH11 291 aa27.44■■□□□ 1.98
PTP4A2-214ENST00000532289 PRDM10Q9NQV6 1147 aa27.44■■□□□ 1.98
PTP4A2-214ENST00000532289 ATG3Q9NT62 314 aa27.44■■□□□ 1.98
PTP4A2-214ENST00000532289 COL5A3P25940 1745 aaPredicted RBP27.44■■□□□ 1.98
PTP4A2-214ENST00000532289 FOXN1O15353 648 aa27.43■■□□□ 1.98
PTP4A2-214ENST00000532289 KDRP35968 1356 aa27.43■■□□□ 1.98
PTP4A2-214ENST00000532289 RFC4P35249 363 aa27.42■■□□□ 1.98
PTP4A2-214ENST00000532289 RC3H1Q5TC82 1133 aaKnown RBP27.42■■□□□ 1.98
PTP4A2-214ENST00000532289 CHRNA5P30532 468 aa27.4■■□□□ 1.98
PTP4A2-214ENST00000532289 SLC4A9Q96Q91 983 aa27.4■■□□□ 1.98
PTP4A2-214ENST00000532289 SPG7Q9UQ90 795 aa27.4■■□□□ 1.98
PTP4A2-214ENST00000532289 FLT4P35916 1363 aa27.39■■□□□ 1.98
PTP4A2-214ENST00000532289 RASSF7Q02833 373 aa27.39■■□□□ 1.98
PTP4A2-214ENST00000532289 NCAPD2Q15021 1401 aa27.39■■□□□ 1.97
PTP4A2-214ENST00000532289 MYH14Q7Z406 1995 aaKnown RBP27.39■■□□□ 1.97
PTP4A2-214ENST00000532289 RPS6KA4O75676 772 aa27.38■■□□□ 1.97
PTP4A2-214ENST00000532289 CREBZFQ9NS37 354 aa27.38■■□□□ 1.97
PTP4A2-214ENST00000532289 MKRN1Q9UHC7 482 aaKnown RBP27.38■■□□□ 1.97
PTP4A2-214ENST00000532289 TIAM2Q8IVF5 1701 aa27.38■■□□□ 1.97
PTP4A2-214ENST00000532289 CCDC88AQ3V6T2 1871 aa27.38■■□□□ 1.97
PTP4A2-214ENST00000532289 CNTNAP4Q9C0A0 1308 aa27.38■■□□□ 1.97
PTP4A2-214ENST00000532289 KIF24Q5T7B8 1368 aa27.37■■□□□ 1.97
PTP4A2-214ENST00000532289 FAM161AQ3B820 660 aa27.37■■□□□ 1.97
PTP4A2-214ENST00000532289 POTECB2RU33 542 aa27.36■■□□□ 1.97
PTP4A2-214ENST00000532289 FYB1O15117 783 aa27.36■■□□□ 1.97
PTP4A2-214ENST00000532289 LMNB1P20700 586 aa27.36■■□□□ 1.97
PTP4A2-214ENST00000532289 CARD11Q9BXL7 1154 aa27.36■■□□□ 1.97
PTP4A2-214ENST00000532289 DDR1Q08345 913 aa27.35■■□□□ 1.97
PTP4A2-214ENST00000532289 GGNBP2Q9H3C7 697 aa27.35■■□□□ 1.97
PTP4A2-214ENST00000532289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.34■■□□□ 1.97
PTP4A2-214ENST00000532289 PHKG2P15735 406 aa27.32■■□□□ 1.96
PTP4A2-214ENST00000532289 CTCFP49711 727 aaPredicted RBP27.32■■□□□ 1.96
PTP4A2-214ENST00000532289 SIN3AQ96ST3 1273 aa27.32■■□□□ 1.96
PTP4A2-214ENST00000532289 FKBP8Q14318 412 aa27.31■■□□□ 1.96
PTP4A2-214ENST00000532289 IFNL2Q8IZJ0 200 aa27.31■■□□□ 1.96
PTP4A2-214ENST00000532289 RBM42Q9BTD8 480 aaKnown RBP27.3■■□□□ 1.96
PTP4A2-214ENST00000532289 SRP68Q9UHB9 627 aaKnown RBP27.29■■□□□ 1.96
PTP4A2-214ENST00000532289 CNTNAP1P78357 1384 aa27.29■■□□□ 1.96
PTP4A2-214ENST00000532289 TONSLQ96HA7 1378 aa27.29■■□□□ 1.96
PTP4A2-214ENST00000532289 USP42Q9H9J4 1324 aaKnown RBP27.27■■□□□ 1.96
PTP4A2-214ENST00000532289 AIDAQ96BJ3 306 aa27.27■■□□□ 1.96
PTP4A2-214ENST00000532289 ABHD8Q96I13 439 aa27.27■■□□□ 1.96
PTP4A2-214ENST00000532289 DLEC1Q9Y238 1755 aa27.27■■□□□ 1.96
PTP4A2-214ENST00000532289 POLRMTO00411 1230 aaKnown RBP27.26■■□□□ 1.95
PTP4A2-214ENST00000532289 CHADLQ6NUI6 762 aa27.26■■□□□ 1.95
PTP4A2-214ENST00000532289 VIRMAQ69YN4 1812 aaKnown RBP27.25■■□□□ 1.95
PTP4A2-214ENST00000532289 KIF20BQ96Q89 1820 aa27.25■■□□□ 1.95
PTP4A2-214ENST00000532289 TM4SF1P30408 202 aa27.24■■□□□ 1.95
PTP4A2-214ENST00000532289 LBX1P52954 281 aa27.23■■□□□ 1.95
PTP4A2-214ENST00000532289 NEUROD1Q13562 356 aa27.23■■□□□ 1.95
PTP4A2-214ENST00000532289 DPY19L2Q6NUT2 758 aa27.23■■□□□ 1.95
PTP4A2-214ENST00000532289 TESK2Q96S53 571 aa27.23■■□□□ 1.95
PTP4A2-214ENST00000532289 AFDNP55196 1824 aaKnown RBP27.23■■□□□ 1.95
PTP4A2-214ENST00000532289 DICER1Q9UPY3 1922 aaKnown RBP27.22■■□□□ 1.95
PTP4A2-214ENST00000532289 ADAMTS7Q9UKP4 1686 aa27.22■■□□□ 1.95
PTP4A2-214ENST00000532289 WBP1LQ9NX94 342 aa27.22■■□□□ 1.95
PTP4A2-214ENST00000532289 EMILIN1Q9Y6C2 1016 aa27.22■■□□□ 1.95
PTP4A2-214ENST00000532289 ERVV-2B6SEH9 535 aa27.21■■□□□ 1.95
PTP4A2-214ENST00000532289 NFKBIEO00221 500 aa27.21■■□□□ 1.95
PTP4A2-214ENST00000532289 MLLT1Q03111 559 aaPredicted RBP27.2■■□□□ 1.94
PTP4A2-214ENST00000532289 EYA1Q99502 592 aa27.2■■□□□ 1.94
PTP4A2-214ENST00000532289 ANKRD26Q9UPS8 1709 aa27.19■■□□□ 1.94
PTP4A2-214ENST00000532289 CRKLP46109 303 aaKnown RBP27.19■■□□□ 1.94
PTP4A2-214ENST00000532289 VEGFBP49765 207 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms