RNA–Protein interactions for RNA: ENST00000532117.1

RNPC3-207, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 3

Gene RNPC3, Length 237 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-207ENST00000532117 TLR1Q15399 786 aa9.56□□□□□ -0.88
RNPC3-207ENST00000532117 TRIM22Q8IYM9 498 aa9.56□□□□□ -0.88
RNPC3-207ENST00000532117 NOD1Q9Y239 953 aa9.56□□□□□ -0.88
RNPC3-207ENST00000532117 FAM181BA6NEQ2 426 aa9.55□□□□□ -0.88
RNPC3-207ENST00000532117 H7C1W4 665 aa9.55□□□□□ -0.88
RNPC3-207ENST00000532117 PHKA2P46019 1235 aa9.55□□□□□ -0.88
RNPC3-207ENST00000532117 NCOA4Q13772 614 aa9.55□□□□□ -0.88
RNPC3-207ENST00000532117 RNFT1Q5M7Z0 435 aa9.55□□□□□ -0.88
RNPC3-207ENST00000532117 PCDHGA11Q9Y5H2 935 aa9.55□□□□□ -0.88
RNPC3-207ENST00000532117 A6NJR5 290 aa9.54□□□□□ -0.88
RNPC3-207ENST00000532117 USP17L5A8MUK1 530 aa9.54□□□□□ -0.88
RNPC3-207ENST00000532117 F11P03951 625 aa9.54□□□□□ -0.88
RNPC3-207ENST00000532117 DBN1Q16643 649 aa9.54□□□□□ -0.88
RNPC3-207ENST00000532117 PPARGC1BQ86YN6 1023 aaKnown RBP9.54□□□□□ -0.88
RNPC3-207ENST00000532117 DEPDC4Q8N2C3 294 aa9.54□□□□□ -0.88
RNPC3-207ENST00000532117 ZNF837Q96EG3 531 aaPredicted RBP9.54□□□□□ -0.88
RNPC3-207ENST00000532117 GTF2IP78347 998 aa9.53□□□□□ -0.88
RNPC3-207ENST00000532117 C4orf17Q53FE4 359 aa9.53□□□□□ -0.88
RNPC3-207ENST00000532117 FOXR1Q6PIV2 292 aa9.53□□□□□ -0.88
RNPC3-207ENST00000532117 RHBDD1Q8TEB9 315 aa9.53□□□□□ -0.88
RNPC3-207ENST00000532117 A0A1B0GTH6 734 aa9.52□□□□□ -0.89
RNPC3-207ENST00000532117 SMTNP53814 917 aa9.52□□□□□ -0.89
RNPC3-207ENST00000532117 TBC1D9Q6ZT07 1266 aa9.52□□□□□ -0.89
RNPC3-207ENST00000532117 UCN2Q96RP3 112 aa9.52□□□□□ -0.89
RNPC3-207ENST00000532117 SERTAD1Q9UHV2 236 aa9.52□□□□□ -0.89
RNPC3-207ENST00000532117 TMEM229AB2RXF0 380 aa9.51□□□□□ -0.89
RNPC3-207ENST00000532117 PLEKHM2Q8IWE5 1019 aa9.51□□□□□ -0.89
RNPC3-207ENST00000532117 GLMNQ92990 594 aa9.51□□□□□ -0.89
RNPC3-207ENST00000532117 SLC4A9Q96Q91 983 aa9.51□□□□□ -0.89
RNPC3-207ENST00000532117 ATP9BO43861 1147 aa9.5□□□□□ -0.89
RNPC3-207ENST00000532117 PSME1Q06323 249 aa9.5□□□□□ -0.89
RNPC3-207ENST00000532117 TRIM50Q86XT4 487 aa9.5□□□□□ -0.89
RNPC3-207ENST00000532117 GTPBP3Q969Y2 492 aaKnown RBP9.5□□□□□ -0.89
RNPC3-207ENST00000532117 USP17L3A6NCW0 530 aa9.49□□□□□ -0.89
RNPC3-207ENST00000532117 USP17L4A6NCW7 530 aa9.49□□□□□ -0.89
RNPC3-207ENST00000532117 USP17L2Q6R6M4 530 aa9.49□□□□□ -0.89
RNPC3-207ENST00000532117 USP17L1Q7RTZ2 530 aa9.49□□□□□ -0.89
RNPC3-207ENST00000532117 NUCKS1Q9H1E3 243 aaKnown RBP9.49□□□□□ -0.89
RNPC3-207ENST00000532117 GPAMQ9HCL2 828 aa9.49□□□□□ -0.89
RNPC3-207ENST00000532117 A6NJY4 79 aa9.48□□□□□ -0.89
RNPC3-207ENST00000532117 GPR25O00155 361 aa9.48□□□□□ -0.89
RNPC3-207ENST00000532117 BACH1O14867 736 aa9.48□□□□□ -0.89
RNPC3-207ENST00000532117 MSX1P28360 303 aa9.48□□□□□ -0.89
RNPC3-207ENST00000532117 GAS6Q14393 721 aa9.48□□□□□ -0.89
RNPC3-207ENST00000532117 TRERF1Q96PN7 1200 aa9.48□□□□□ -0.89
RNPC3-207ENST00000532117 NIFKQ9BYG3 293 aaKnown RBP9.48□□□□□ -0.89
RNPC3-207ENST00000532117 CDK2AP1O14519 115 aa9.47□□□□□ -0.89
RNPC3-207ENST00000532117 SLURP2P0DP57 97 aa9.47□□□□□ -0.89
RNPC3-207ENST00000532117 CSB-PGBD3P0DP91 1061 aa9.47□□□□□ -0.89
RNPC3-207ENST00000532117 PLA2G4AP47712 749 aa9.47□□□□□ -0.89
RNPC3-207ENST00000532117 MTFR1Q15390 333 aa9.47□□□□□ -0.89
RNPC3-207ENST00000532117 PGBD3Q8N328 593 aa9.47□□□□□ -0.89
RNPC3-207ENST00000532117 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
RNPC3-207ENST00000532117 ATP1A2P50993 1020 aa9.46□□□□□ -0.9
RNPC3-207ENST00000532117 CALR3Q96L12 384 aaKnown RBP9.46□□□□□ -0.9
RNPC3-207ENST00000532117 ZNF358Q9NW07 568 aa9.46□□□□□ -0.9
RNPC3-207ENST00000532117 TFIP11Q9UBB9 837 aaKnown RBP9.46□□□□□ -0.9
RNPC3-207ENST00000532117 SRSF11Q05519 484 aaKnown RBP9.45□□□□□ -0.9
RNPC3-207ENST00000532117 LBRQ14739 615 aaKnown RBP9.45□□□□□ -0.9
RNPC3-207ENST00000532117 RUBCNLQ9H714 662 aa9.45□□□□□ -0.9
RNPC3-207ENST00000532117 MBIPQ9NS73 344 aa9.45□□□□□ -0.9
RNPC3-207ENST00000532117 MKRN1Q9UHC7 482 aaKnown RBP9.45□□□□□ -0.9
RNPC3-207ENST00000532117 IQSEC3Q9UPP2 1182 aaPredicted RBP9.45□□□□□ -0.9
RNPC3-207ENST00000532117 ZBTB7BO15156 539 aaPredicted RBP9.44□□□□□ -0.9
RNPC3-207ENST00000532117 ADAMTS2O95450 1211 aa9.44□□□□□ -0.9
RNPC3-207ENST00000532117 THBS1P07996 1170 aa9.44□□□□□ -0.9
RNPC3-207ENST00000532117 CLDN10P78369 228 aa9.44□□□□□ -0.9
RNPC3-207ENST00000532117 AIDAQ96BJ3 306 aa9.44□□□□□ -0.9
RNPC3-207ENST00000532117 EFHC2Q5JST6 749 aa9.43□□□□□ -0.9
RNPC3-207ENST00000532117 ZNF385CQ66K41 422 aaPredicted RBP9.43□□□□□ -0.9
RNPC3-207ENST00000532117 CCDC102BQ68D86 513 aa9.43□□□□□ -0.9
RNPC3-207ENST00000532117 ZNF295-AS1Q8N0V1 137 aa9.43□□□□□ -0.9
RNPC3-207ENST00000532117 OGFOD1Q8N543 542 aa9.43□□□□□ -0.9
RNPC3-207ENST00000532117 TPCN2Q8NHX9 752 aa9.43□□□□□ -0.9
RNPC3-207ENST00000532117 C1orf216Q8TAB5 229 aa9.43□□□□□ -0.9
RNPC3-207ENST00000532117 DNAAF2Q9NVR5 837 aaKnown RBP9.43□□□□□ -0.9
RNPC3-207ENST00000532117 CABP1Q9NZU7 370 aa9.43□□□□□ -0.9
RNPC3-207ENST00000532117 KIAA1024Q9UPX6 916 aa9.43□□□□□ -0.9
RNPC3-207ENST00000532117 USP3Q9Y6I4 520 aa9.43□□□□□ -0.9
RNPC3-207ENST00000532117 LARGE2Q8N3Y3 721 aa9.42□□□□□ -0.9
RNPC3-207ENST00000532117 SVOPQ8N4V2 548 aa9.42□□□□□ -0.9
RNPC3-207ENST00000532117 WHAMMQ8TF30 809 aa9.42□□□□□ -0.9
RNPC3-207ENST00000532117 CFHR5Q9BXR6 569 aa9.42□□□□□ -0.9
RNPC3-207ENST00000532117 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
RNPC3-207ENST00000532117 MAFBQ9Y5Q3 323 aaPredicted RBP9.42□□□□□ -0.9
RNPC3-207ENST00000532117 PALM3A6NDB9 673 aaPredicted RBP9.41□□□□□ -0.9
RNPC3-207ENST00000532117 NBPF1Q3BBV0 1214 aa9.41□□□□□ -0.9
RNPC3-207ENST00000532117 PPP1R12CQ9BZL4 782 aa9.41□□□□□ -0.9
RNPC3-207ENST00000532117 CRISPLD1Q9H336 500 aa9.41□□□□□ -0.9
RNPC3-207ENST00000532117 PHF24Q9UPV7 400 aa9.41□□□□□ -0.9
RNPC3-207ENST00000532117 IGF1RP08069 1367 aa9.4□□□□□ -0.9
RNPC3-207ENST00000532117 UBAP2LQ14157 1087 aaKnown RBP9.4□□□□□ -0.9
RNPC3-207ENST00000532117 TNS4Q8IZW8 715 aa9.4□□□□□ -0.9
RNPC3-207ENST00000532117 ZNF777Q9ULD5 760 aaPredicted RBP9.4□□□□□ -0.9
RNPC3-207ENST00000532117 MX2P20592 715 aa9.39□□□□□ -0.91
RNPC3-207ENST00000532117 ATP4AP20648 1035 aa9.39□□□□□ -0.91
RNPC3-207ENST00000532117 EPHA4P54764 986 aa9.39□□□□□ -0.91
RNPC3-207ENST00000532117 FOXK2Q01167 660 aa9.39□□□□□ -0.91
RNPC3-207ENST00000532117 LYPD4Q6UWN0 246 aa9.39□□□□□ -0.91
RNPC3-207ENST00000532117 NSFL1CQ9UNZ2 370 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms