RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 CKAP2LQ8IYA6 745 aa6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 RBM33Q96EV2 1170 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 CEP89Q96ST8 783 aa6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 RBCK1Q9BYM8 510 aa6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 PCDHGB7Q9Y5F8 929 aa6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 EMILIN1Q9Y6C2 1016 aa6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 PLIN1O60240 522 aa6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 RGS20O76081 388 aa6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 ZNF654Q8IZM8 581 aa6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 KIF12Q96FN5 646 aa6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 ARHGEF10LQ9HCE6 1279 aa6.74□□□□□ -1.33
ECHDC1-222ENST00000531967 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 CALRP27797 417 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 POU5F1BQ06416 359 aa6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 WDR75Q8IWA0 830 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 MKL1Q969V6 931 aa6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 PRIMPOLQ96LW4 560 aa6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 APBA2Q99767 749 aa6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 PCGF6Q9BYE7 350 aa6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 SEPT3Q9UH03 358 aa6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 IFRD1O00458 451 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 KIF3BO15066 747 aa6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 FGAP02671 866 aa6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 TTC39BQ5VTQ0 682 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 NBPF6Q5VWK0 638 aa6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 RAVER1Q8IY67 606 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 CXorf38Q8TB03 319 aa6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 NBPF4Q96M43 638 aa6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 INO80BQ9C086 356 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 SCINQ9Y6U3 715 aa6.73□□□□□ -1.33
ECHDC1-222ENST00000531967 KIF3CO14782 793 aa6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 COPB2P35606 906 aa6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 USP5P45974 858 aa6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 NR6A1Q15406 480 aa6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 MICALL2Q8IY33 904 aa6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 ZNF594Q96JF6 807 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 CEP63Q96MT8 703 aa6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 PAGR1Q9BTK6 254 aa6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 MAPK8P45983 427 aa6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 NR1H3Q13133 447 aa6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 HDAC1Q13547 482 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 C12orf49Q9H741 205 aa6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 AVENQ9NQS1 362 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-222ENST00000531967 CDC45O75419 566 aa6.71□□□□□ -1.33
ECHDC1-222ENST00000531967 PDE6BP35913 854 aa6.71□□□□□ -1.33
ECHDC1-222ENST00000531967 ZRSR2Q15696 482 aaKnown RBP6.71□□□□□ -1.33
ECHDC1-222ENST00000531967 ILDR1Q86SU0 546 aaPredicted RBP6.71□□□□□ -1.33
ECHDC1-222ENST00000531967 SLF2Q8IX21 1173 aa6.71□□□□□ -1.33
ECHDC1-222ENST00000531967 OGFOD1Q8N543 542 aa6.71□□□□□ -1.33
ECHDC1-222ENST00000531967 ATF4P18848 351 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-222ENST00000531967 RBM10P98175 930 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-222ENST00000531967 VPS72Q15906 364 aa6.71□□□□□ -1.34
ECHDC1-222ENST00000531967 SYCP2LQ5T4T6 812 aa6.71□□□□□ -1.34
ECHDC1-222ENST00000531967 SULF1Q8IWU6 871 aa6.71□□□□□ -1.34
ECHDC1-222ENST00000531967 SAMD3Q8N6K7 520 aa6.71□□□□□ -1.34
ECHDC1-222ENST00000531967 SRPK1Q96SB4 655 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-222ENST00000531967 CYLDQ9NQC7 956 aa6.71□□□□□ -1.34
ECHDC1-222ENST00000531967 HOMER2Q9NSB8 354 aa6.71□□□□□ -1.34
ECHDC1-222ENST00000531967 KAT6BQ8WYB5 2073 aa6.71□□□□□ -1.34
ECHDC1-222ENST00000531967 MAN1A1P33908 653 aa6.7□□□□□ -1.34
ECHDC1-222ENST00000531967 CASS4Q9NQ75 786 aa6.7□□□□□ -1.34
ECHDC1-222ENST00000531967 CAND2O75155 1236 aa6.7□□□□□ -1.34
ECHDC1-222ENST00000531967 FOSP01100 380 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-222ENST00000531967 POU5F1Q01860 360 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-222ENST00000531967 ARPC5LQ9BPX5 153 aa6.7□□□□□ -1.34
ECHDC1-222ENST00000531967 FANCLQ9NW38 375 aa6.7□□□□□ -1.34
ECHDC1-222ENST00000531967 TPX2Q9ULW0 747 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-222ENST00000531967 NRDCO43847 1150 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 PHF14O94880 888 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 DSC3Q14574 896 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 USP48Q86UV5 1035 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 PRKD2Q9BZL6 878 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 DDX11L8A8MPP1 907 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 NR1I2O75469 434 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 FBXO45P0C2W1 286 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 NOS2P35228 1153 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 CLDN10P78369 228 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 BRD3Q15059 726 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 EFCAB2Q5VUJ9 269 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 PDILTQ8N807 584 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 PPM1EQ8WY54 764 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 SRA1Q9HD15 236 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 CHST12Q9NRB3 414 aa6.69□□□□□ -1.34
ECHDC1-222ENST00000531967 KRT18P05783 430 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 FDX1P10109 184 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 GJA8P48165 433 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 CHMP4BP1P59074 171 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 KCNH2Q12809 1159 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 ICE2Q659A1 982 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 TTC13Q8NBP0 860 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 C1orf131Q8NDD1 294 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 PCDHGC3Q9UN70 934 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 ARSHQ5FYA8 562 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 PGBD3Q8N328 593 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 MKNK1Q9BUB5 465 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 ARNT2Q9HBZ2 717 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 ANAPC4Q9UJX5 808 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 CLSPNQ9HAW4 1339 aa6.68□□□□□ -1.34
ECHDC1-222ENST00000531967 CFAP99D6REC4 459 aa6.67□□□□□ -1.34
ECHDC1-222ENST00000531967 EHHADHQ08426 723 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms