RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 ITPK1Q13572 414 aa18.18■□□□□ 0.5
AMBRA1-210ENST00000531542 AMIGO3Q86WK7 504 aa18.18■□□□□ 0.5
AMBRA1-210ENST00000531542 GRIN3BO60391 1043 aa18.17■□□□□ 0.5
AMBRA1-210ENST00000531542 KLHL34Q8N239 644 aa18.17■□□□□ 0.5
AMBRA1-210ENST00000531542 MSL1Q68DK7 614 aa18.16■□□□□ 0.5
AMBRA1-210ENST00000531542 ZNF530Q6P9A1 599 aaPredicted RBP18.16■□□□□ 0.5
AMBRA1-210ENST00000531542 RC3H1Q5TC82 1133 aaKnown RBP18.15■□□□□ 0.5
AMBRA1-210ENST00000531542 SULT6B1Q6IMI4 303 aa18.15■□□□□ 0.5
AMBRA1-210ENST00000531542 AEBP1Q8IUX7 1158 aa18.15■□□□□ 0.5
AMBRA1-210ENST00000531542 ZNF831Q5JPB2 1677 aa18.15■□□□□ 0.5
AMBRA1-210ENST00000531542 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
AMBRA1-210ENST00000531542 MTHFSP49914 203 aa18.14■□□□□ 0.49
AMBRA1-210ENST00000531542 C1orf141Q5JVX7 400 aa18.14■□□□□ 0.49
AMBRA1-210ENST00000531542 UBR3Q6ZT12 1888 aa18.14■□□□□ 0.49
AMBRA1-210ENST00000531542 CHD4Q14839 1912 aa18.13■□□□□ 0.49
AMBRA1-210ENST00000531542 GNPATO15228 680 aa18.13■□□□□ 0.49
AMBRA1-210ENST00000531542 PHF14O94880 888 aa18.13■□□□□ 0.49
AMBRA1-210ENST00000531542 ADRA2BP18089 450 aa18.13■□□□□ 0.49
AMBRA1-210ENST00000531542 CABP4P57796 275 aa18.13■□□□□ 0.49
AMBRA1-210ENST00000531542 SLC4A9Q96Q91 983 aa18.13■□□□□ 0.49
AMBRA1-210ENST00000531542 NPC1L1Q9UHC9 1359 aa18.13■□□□□ 0.49
AMBRA1-210ENST00000531542 YBX3P16989 372 aaKnown RBP eCLIP18.12■□□□□ 0.49
AMBRA1-210ENST00000531542 CNTNAP4Q9C0A0 1308 aa18.12■□□□□ 0.49
AMBRA1-210ENST00000531542 GOLGB1Q14789 3259 aaKnown RBP18.12■□□□□ 0.49
AMBRA1-210ENST00000531542 RTCBQ9Y3I0 505 aaKnown RBP18.11■□□□□ 0.49
AMBRA1-210ENST00000531542 TRAPPC3LQ5T215 181 aa18.1■□□□□ 0.49
AMBRA1-210ENST00000531542 NLGN1Q8N2Q7 840 aa18.1■□□□□ 0.49
AMBRA1-210ENST00000531542 RPS6KA4O75676 772 aa18.09■□□□□ 0.49
AMBRA1-210ENST00000531542 AKAP4Q5JQC9 854 aa18.09■□□□□ 0.49
AMBRA1-210ENST00000531542 SMIM5Q71RC9 77 aa18.09■□□□□ 0.49
AMBRA1-210ENST00000531542 PELP1Q8IZL8 1130 aaKnown RBP18.09■□□□□ 0.49
AMBRA1-210ENST00000531542 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
AMBRA1-210ENST00000531542 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
AMBRA1-210ENST00000531542 DIAPH1O60610 1272 aaKnown RBP18.06■□□□□ 0.48
AMBRA1-210ENST00000531542 ARHGEF1Q92888 912 aaKnown RBP18.06■□□□□ 0.48
AMBRA1-210ENST00000531542 MMP10P09238 476 aa18.04■□□□□ 0.48
AMBRA1-210ENST00000531542 SLC52A2Q9HAB3 445 aa18.04■□□□□ 0.48
AMBRA1-210ENST00000531542 CICQ96RK0 1608 aaPredicted RBP18.03■□□□□ 0.48
AMBRA1-210ENST00000531542 PTCD1O75127 700 aaKnown RBP18.03■□□□□ 0.48
AMBRA1-210ENST00000531542 GYS1P13807 737 aa18.03■□□□□ 0.48
AMBRA1-210ENST00000531542 RFC4P35249 363 aa18.03■□□□□ 0.48
AMBRA1-210ENST00000531542 TGFB2P61812 414 aa18.03■□□□□ 0.48
AMBRA1-210ENST00000531542 CC2D1BQ5T0F9 858 aaKnown RBP18.03■□□□□ 0.48
AMBRA1-210ENST00000531542 COL5A3P25940 1745 aaPredicted RBP18.02■□□□□ 0.48
AMBRA1-210ENST00000531542 CRKLP46109 303 aaKnown RBP18.02■□□□□ 0.48
AMBRA1-210ENST00000531542 C1QTNF8P60827 252 aa18.02■□□□□ 0.48
AMBRA1-210ENST00000531542 MRC1P22897 1456 aa18.01■□□□□ 0.47
AMBRA1-210ENST00000531542 RNMTO43148 476 aaKnown RBP18.01■□□□□ 0.47
AMBRA1-210ENST00000531542 HMOX1P09601 288 aa18.01■□□□□ 0.47
AMBRA1-210ENST00000531542 LGR6Q9HBX8 967 aa18.01■□□□□ 0.47
AMBRA1-210ENST00000531542 MTHFSDQ2M296 383 aaKnown RBP18■□□□□ 0.47
AMBRA1-210ENST00000531542 INTS5Q6P9B9 1019 aaKnown RBP17.99■□□□□ 0.47
AMBRA1-210ENST00000531542 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
AMBRA1-210ENST00000531542 SCN11AQ9UI33 1791 aa17.99■□□□□ 0.47
AMBRA1-210ENST00000531542 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
AMBRA1-210ENST00000531542 CCDC87Q9NVE4 849 aa17.98■□□□□ 0.47
AMBRA1-210ENST00000531542 ADCY9O60503 1353 aa17.98■□□□□ 0.47
AMBRA1-210ENST00000531542 COL3A1P02461 1466 aaPredicted RBP17.98■□□□□ 0.47
AMBRA1-210ENST00000531542 ADAMTS7Q9UKP4 1686 aa17.98■□□□□ 0.47
AMBRA1-210ENST00000531542 USP42Q9H9J4 1324 aaKnown RBP17.98■□□□□ 0.47
AMBRA1-210ENST00000531542 PXDNLA1KZ92 1463 aa17.97■□□□□ 0.47
AMBRA1-210ENST00000531542 GIGYF1O75420 1035 aaPredicted RBP17.97■□□□□ 0.47
AMBRA1-210ENST00000531542 PARP3Q9Y6F1 533 aa17.97■□□□□ 0.47
AMBRA1-210ENST00000531542 MYH14Q7Z406 1995 aaKnown RBP17.97■□□□□ 0.47
AMBRA1-210ENST00000531542 KIF13BQ9NQT8 1826 aa17.96■□□□□ 0.47
AMBRA1-210ENST00000531542 CYP19A1P11511 503 aaPredicted RBP17.95■□□□□ 0.46
AMBRA1-210ENST00000531542 GAS2L2Q8NHY3 880 aa17.95■□□□□ 0.46
AMBRA1-210ENST00000531542 DNAJC10Q8IXB1 793 aa17.94■□□□□ 0.46
AMBRA1-210ENST00000531542 ATP10DQ9P241 1426 aa17.94■□□□□ 0.46
AMBRA1-210ENST00000531542 TJP1Q07157 1748 aa17.94■□□□□ 0.46
AMBRA1-210ENST00000531542 SOS1Q07889 1333 aaPredicted RBP17.94■□□□□ 0.46
AMBRA1-210ENST00000531542 C4AP0C0L4 1744 aa17.93■□□□□ 0.46
AMBRA1-210ENST00000531542 TM4SF1P30408 202 aa17.93■□□□□ 0.46
AMBRA1-210ENST00000531542 SLC39A6Q13433 755 aa17.93■□□□□ 0.46
AMBRA1-210ENST00000531542 FKBP8Q14318 412 aa17.93■□□□□ 0.46
AMBRA1-210ENST00000531542 KCPQ6ZWJ8 1503 aa17.93■□□□□ 0.46
AMBRA1-210ENST00000531542 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
AMBRA1-210ENST00000531542 GNAT3A8MTJ3 354 aa17.92■□□□□ 0.46
AMBRA1-210ENST00000531542 U2SURPO15042 1029 aaKnown RBP17.92■□□□□ 0.46
AMBRA1-210ENST00000531542 SRP68Q9UHB9 627 aaKnown RBP17.92■□□□□ 0.46
AMBRA1-210ENST00000531542 ZPR1O75312 459 aa17.91■□□□□ 0.46
AMBRA1-210ENST00000531542 DPEP1P16444 411 aa17.91■□□□□ 0.46
AMBRA1-210ENST00000531542 IL17REQ8NFR9 667 aa17.91■□□□□ 0.46
AMBRA1-210ENST00000531542 CFAP53Q96M91 514 aa17.91■□□□□ 0.46
AMBRA1-210ENST00000531542 GPBP1L1Q9HC44 474 aaPredicted RBP17.91■□□□□ 0.46
AMBRA1-210ENST00000531542 NARFQ9UHQ1 456 aa17.91■□□□□ 0.46
AMBRA1-210ENST00000531542 KIAA1551Q9HCM1 1747 aa17.9■□□□□ 0.46
AMBRA1-210ENST00000531542 KCNA3P22001 575 aa17.9■□□□□ 0.46
AMBRA1-210ENST00000531542 DDR1Q08345 913 aa17.9■□□□□ 0.46
AMBRA1-210ENST00000531542 TEX13AQ9BXU3 409 aaPredicted RBP17.9■□□□□ 0.46
AMBRA1-210ENST00000531542 CEMIPQ8WUJ3 1361 aa17.9■□□□□ 0.46
AMBRA1-210ENST00000531542 POLRMTO00411 1230 aaKnown RBP17.89■□□□□ 0.45
AMBRA1-210ENST00000531542 STARD3NLO95772 234 aa17.89■□□□□ 0.45
AMBRA1-210ENST00000531542 TEFQ10587 303 aa17.89■□□□□ 0.45
AMBRA1-210ENST00000531542 TTC5Q8N0Z6 440 aa17.89■□□□□ 0.45
AMBRA1-210ENST00000531542 BCS1LQ9Y276 419 aa17.89■□□□□ 0.45
AMBRA1-210ENST00000531542 SENP3-EIF4A1A0A087X0R7 540 aa17.88■□□□□ 0.45
AMBRA1-210ENST00000531542 USPL1Q5W0Q7 1092 aa17.88■□□□□ 0.45
AMBRA1-210ENST00000531542 ZNF790Q6PG37 636 aa17.88■□□□□ 0.45
AMBRA1-210ENST00000531542 RSPH6AQ9H0K4 717 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms