RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 GNPATO15228 680 aa16.84■□□□□ 0.29
C11orf54-210ENST00000531516 PHF14O94880 888 aa16.84■□□□□ 0.29
C11orf54-210ENST00000531516 NFATC2IPQ8NCF5 419 aa16.84■□□□□ 0.29
C11orf54-210ENST00000531516 GAS2L2Q8NHY3 880 aa16.84■□□□□ 0.29
C11orf54-210ENST00000531516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.83■□□□□ 0.28
C11orf54-210ENST00000531516 NEFMP07197 916 aa16.83■□□□□ 0.28
C11orf54-210ENST00000531516 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
C11orf54-210ENST00000531516 LINC00116Q8NCU8 138 aa16.82■□□□□ 0.28
C11orf54-210ENST00000531516 MAP3K5Q99683 1374 aa16.81■□□□□ 0.28
C11orf54-210ENST00000531516 PTCD1O75127 700 aaKnown RBP16.81■□□□□ 0.28
C11orf54-210ENST00000531516 SLC52A2Q9HAB3 445 aa16.81■□□□□ 0.28
C11orf54-210ENST00000531516 KDM6AO15550 1401 aaPredicted RBP16.8■□□□□ 0.28
C11orf54-210ENST00000531516 TOGARAM1Q9Y4F4 1720 aa16.8■□□□□ 0.28
C11orf54-210ENST00000531516 PPP2R1AP30153 589 aa16.8■□□□□ 0.28
C11orf54-210ENST00000531516 ITPK1Q13572 414 aa16.8■□□□□ 0.28
C11orf54-210ENST00000531516 MTHFSDQ2M296 383 aaKnown RBP16.8■□□□□ 0.28
C11orf54-210ENST00000531516 TRAPPC3LQ5T215 181 aa16.8■□□□□ 0.28
C11orf54-210ENST00000531516 RC3H1Q5TC82 1133 aaKnown RBP16.8■□□□□ 0.28
C11orf54-210ENST00000531516 MSL1Q68DK7 614 aa16.8■□□□□ 0.28
C11orf54-210ENST00000531516 RNMTO43148 476 aaKnown RBP16.79■□□□□ 0.28
C11orf54-210ENST00000531516 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
C11orf54-210ENST00000531516 ADRA2BP18089 450 aa16.79■□□□□ 0.28
C11orf54-210ENST00000531516 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.28
C11orf54-210ENST00000531516 TEFQ10587 303 aa16.79■□□□□ 0.28
C11orf54-210ENST00000531516 GNAT3A8MTJ3 354 aa16.78■□□□□ 0.28
C11orf54-210ENST00000531516 YY1P25490 414 aa16.78■□□□□ 0.28
C11orf54-210ENST00000531516 GPR162Q16538 588 aa16.78■□□□□ 0.28
C11orf54-210ENST00000531516 TTC5Q8N0Z6 440 aa16.78■□□□□ 0.28
C11orf54-210ENST00000531516 QSER1Q2KHR3 1735 aa16.78■□□□□ 0.28
C11orf54-210ENST00000531516 C5P01031 1676 aa16.78■□□□□ 0.28
C11orf54-210ENST00000531516 ITGB4P16144 1822 aa16.77■□□□□ 0.28
C11orf54-210ENST00000531516 CNTNAP4Q9C0A0 1308 aa16.77■□□□□ 0.28
C11orf54-210ENST00000531516 RFC4P35249 363 aa16.77■□□□□ 0.28
C11orf54-210ENST00000531516 C4BP0C0L5 1744 aa16.76■□□□□ 0.27
C11orf54-210ENST00000531516 PRKAR2BP31323 418 aa16.76■□□□□ 0.27
C11orf54-210ENST00000531516 PELP1Q8IZL8 1130 aaKnown RBP16.76■□□□□ 0.27
C11orf54-210ENST00000531516 RTF1Q92541 710 aaKnown RBP16.76■□□□□ 0.27
C11orf54-210ENST00000531516 PNNQ9H307 717 aaKnown RBP16.76■□□□□ 0.27
C11orf54-210ENST00000531516 LGR6Q9HBX8 967 aa16.76■□□□□ 0.27
C11orf54-210ENST00000531516 RPS6KA4O75676 772 aa16.75■□□□□ 0.27
C11orf54-210ENST00000531516 FCHSD2O94868 740 aa16.75■□□□□ 0.27
C11orf54-210ENST00000531516 NLGN1Q8N2Q7 840 aa16.75■□□□□ 0.27
C11orf54-210ENST00000531516 CD2APQ9Y5K6 639 aa16.75■□□□□ 0.27
C11orf54-210ENST00000531516 COL3A1P02461 1466 aaPredicted RBP16.73■□□□□ 0.27
C11orf54-210ENST00000531516 RALBP1Q15311 655 aa16.73■□□□□ 0.27
C11orf54-210ENST00000531516 NPM2Q86SE8 214 aaKnown RBP16.73■□□□□ 0.27
C11orf54-210ENST00000531516 ZEB1P37275 1124 aaPredicted RBP16.72■□□□□ 0.27
C11orf54-210ENST00000531516 CRKLP46109 303 aaKnown RBP16.72■□□□□ 0.27
C11orf54-210ENST00000531516 VSIG10Q8N0Z9 540 aa16.72■□□□□ 0.27
C11orf54-210ENST00000531516 SLC4A9Q96Q91 983 aa16.72■□□□□ 0.27
C11orf54-210ENST00000531516 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
C11orf54-210ENST00000531516 GRIN3BO60391 1043 aa16.71■□□□□ 0.27
C11orf54-210ENST00000531516 STARD3NLO95772 234 aa16.71■□□□□ 0.27
C11orf54-210ENST00000531516 ARHGEF1Q92888 912 aaKnown RBP16.71■□□□□ 0.27
C11orf54-210ENST00000531516 TEX13AQ9BXU3 409 aaPredicted RBP16.71■□□□□ 0.27
C11orf54-210ENST00000531516 ZPR1O75312 459 aa16.7■□□□□ 0.26
C11orf54-210ENST00000531516 SLC39A6Q13433 755 aa16.7■□□□□ 0.26
C11orf54-210ENST00000531516 CCDC87Q9NVE4 849 aa16.7■□□□□ 0.26
C11orf54-210ENST00000531516 MMP10P09238 476 aa16.69■□□□□ 0.26
C11orf54-210ENST00000531516 SMIM5Q71RC9 77 aa16.69■□□□□ 0.26
C11orf54-210ENST00000531516 AMIGO3Q86WK7 504 aa16.69■□□□□ 0.26
C11orf54-210ENST00000531516 DNAJC10Q8IXB1 793 aa16.69■□□□□ 0.26
C11orf54-210ENST00000531516 PARP3Q9Y6F1 533 aa16.69■□□□□ 0.26
C11orf54-210ENST00000531516 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
C11orf54-210ENST00000531516 HTATSF1O43719 755 aaKnown RBP16.68■□□□□ 0.26
C11orf54-210ENST00000531516 DDX10Q13206 875 aaKnown RBP16.68■□□□□ 0.26
C11orf54-210ENST00000531516 NLGN2Q8NFZ4 835 aa16.68■□□□□ 0.26
C11orf54-210ENST00000531516 PHACTR3Q96KR7 559 aa16.68■□□□□ 0.26
C11orf54-210ENST00000531516 MAPK8IP3Q9UPT6 1336 aa16.68■□□□□ 0.26
C11orf54-210ENST00000531516 MRC1P22897 1456 aa16.67■□□□□ 0.26
C11orf54-210ENST00000531516 ZNF831Q5JPB2 1677 aa16.67■□□□□ 0.26
C11orf54-210ENST00000531516 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
C11orf54-210ENST00000531516 IL17REQ8NFR9 667 aa16.67■□□□□ 0.26
C11orf54-210ENST00000531516 FMNL2Q96PY5 1086 aa16.67■□□□□ 0.26
C11orf54-210ENST00000531516 TUBGCP6Q96RT7 1819 aa16.67■□□□□ 0.26
C11orf54-210ENST00000531516 BTBD11A6QL63 1104 aa16.66■□□□□ 0.26
C11orf54-210ENST00000531516 A0A087WZG4 1122 aa16.65■□□□□ 0.26
C11orf54-210ENST00000531516 CYP19A1P11511 503 aaPredicted RBP16.65■□□□□ 0.26
C11orf54-210ENST00000531516 SCN11AQ9UI33 1791 aa16.64■□□□□ 0.25
C11orf54-210ENST00000531516 GYS1P13807 737 aa16.64■□□□□ 0.25
C11orf54-210ENST00000531516 INTS5Q6P9B9 1019 aaKnown RBP16.64■□□□□ 0.25
C11orf54-210ENST00000531516 USP42Q9H9J4 1324 aaKnown RBP16.64■□□□□ 0.25
C11orf54-210ENST00000531516 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
C11orf54-210ENST00000531516 TGFB2P61812 414 aa16.63■□□□□ 0.25
C11orf54-210ENST00000531516 CEMIPQ8WUJ3 1361 aa16.63■□□□□ 0.25
C11orf54-210ENST00000531516 HEG1Q9ULI3 1381 aa16.63■□□□□ 0.25
C11orf54-210ENST00000531516 COL24A1Q17RW2 1714 aa16.62■□□□□ 0.25
C11orf54-210ENST00000531516 CANXP27824 592 aaKnown RBP16.62■□□□□ 0.25
C11orf54-210ENST00000531516 PNISRQ8TF01 805 aaKnown RBP16.62■□□□□ 0.25
C11orf54-210ENST00000531516 ZNF496Q96IT1 587 aaPredicted RBP16.62■□□□□ 0.25
C11orf54-210ENST00000531516 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
C11orf54-210ENST00000531516 MCM10Q7L590 875 aa16.61■□□□□ 0.25
C11orf54-210ENST00000531516 NARFQ9UHQ1 456 aa16.61■□□□□ 0.25
C11orf54-210ENST00000531516 MYBBP1AQ9BQG0 1328 aaKnown RBP16.61■□□□□ 0.25
C11orf54-210ENST00000531516 WDR43Q15061 677 aaKnown RBP eCLIP16.6■□□□□ 0.25
C11orf54-210ENST00000531516 TAF7Q15545 349 aaPredicted RBP16.6■□□□□ 0.25
C11orf54-210ENST00000531516 USPL1Q5W0Q7 1092 aa16.6■□□□□ 0.25
C11orf54-210ENST00000531516 SRP68Q9UHB9 627 aaKnown RBP16.6■□□□□ 0.25
C11orf54-210ENST00000531516 ZBTB1Q9Y2K1 713 aa16.6■□□□□ 0.25
C11orf54-210ENST00000531516 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms