RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 SLC4A9Q96Q91 983 aa29.22■■■□□ 2.27
CHKA-206ENST00000531341 MMP10P09238 476 aa29.21■■■□□ 2.27
CHKA-206ENST00000531341 EIF4A2Q14240 407 aaKnown RBP29.2■■■□□ 2.26
CHKA-206ENST00000531341 KIF3CO14782 793 aa29.19■■■□□ 2.26
CHKA-206ENST00000531341 TNNT2P45379 298 aaPredicted RBP29.18■■■□□ 2.26
CHKA-206ENST00000531341 PXDNLA1KZ92 1463 aa29.17■■■□□ 2.26
CHKA-206ENST00000531341 KDRP35968 1356 aa29.15■■■□□ 2.26
CHKA-206ENST00000531341 A0A0G2JLW4 131 aa29.15■■■□□ 2.26
CHKA-206ENST00000531341 TRAPPC3LQ5T215 181 aa29.14■■■□□ 2.26
CHKA-206ENST00000531341 ARHGEF1Q92888 912 aaKnown RBP29.13■■■□□ 2.25
CHKA-206ENST00000531341 RBM42Q9BTD8 480 aaKnown RBP29.13■■■□□ 2.25
CHKA-206ENST00000531341 RTCBQ9Y3I0 505 aaKnown RBP29.13■■■□□ 2.25
CHKA-206ENST00000531341 KIAA1551Q9HCM1 1747 aa29.13■■■□□ 2.25
CHKA-206ENST00000531341 CICQ96RK0 1608 aaPredicted RBP29.12■■■□□ 2.25
CHKA-206ENST00000531341 BCS1LQ9Y276 419 aa29.11■■■□□ 2.25
CHKA-206ENST00000531341 TGFB2P61812 414 aa29.1■■■□□ 2.25
CHKA-206ENST00000531341 POLR3GLQ9BT43 218 aa29.1■■■□□ 2.25
CHKA-206ENST00000531341 N4BP2Q86UW6 1770 aaPredicted RBP29.1■■■□□ 2.25
CHKA-206ENST00000531341 ERVV-2B6SEH9 535 aa29.09■■■□□ 2.25
CHKA-206ENST00000531341 GYS1P13807 737 aa29.09■■■□□ 2.25
CHKA-206ENST00000531341 NLGN1Q8N2Q7 840 aa29.09■■■□□ 2.25
CHKA-206ENST00000531341 KIF13BQ9NQT8 1826 aa29.08■■■□□ 2.25
CHKA-206ENST00000531341 DPEP1P16444 411 aa29.08■■■□□ 2.25
CHKA-206ENST00000531341 C10orf71Q711Q0 1435 aa29.08■■■□□ 2.25
CHKA-206ENST00000531341 RC3H1Q5TC82 1133 aaKnown RBP29.07■■■□□ 2.24
CHKA-206ENST00000531341 DCAF5Q96JK2 942 aa29.06■■■□□ 2.24
CHKA-206ENST00000531341 KDM6AO15550 1401 aaPredicted RBP29.05■■■□□ 2.24
CHKA-206ENST00000531341 RPS6KA4O75676 772 aa29.05■■■□□ 2.24
CHKA-206ENST00000531341 ARHGAP27Q6ZUM4 889 aa29.05■■■□□ 2.24
CHKA-206ENST00000531341 CNTNAP4Q9C0A0 1308 aa29.04■■■□□ 2.24
CHKA-206ENST00000531341 KCNA3P22001 575 aa29.04■■■□□ 2.24
CHKA-206ENST00000531341 RFC4P35249 363 aa29.03■■■□□ 2.24
CHKA-206ENST00000531341 ADRA2BP18089 450 aa29.02■■■□□ 2.24
CHKA-206ENST00000531341 PLEKHO1Q53GL0 409 aaPredicted RBP29.02■■■□□ 2.24
CHKA-206ENST00000531341 ZNF530Q6P9A1 599 aaPredicted RBP29.02■■■□□ 2.24
CHKA-206ENST00000531341 CCDC87Q9NVE4 849 aa29.02■■■□□ 2.24
CHKA-206ENST00000531341 COL5A3P25940 1745 aaPredicted RBP29.02■■■□□ 2.24
CHKA-206ENST00000531341 ZNF831Q5JPB2 1677 aa29.02■■■□□ 2.24
CHKA-206ENST00000531341 PLEKHG2Q9H7P9 1386 aa29.01■■■□□ 2.24
CHKA-206ENST00000531341 C4AP0C0L4 1744 aa29.01■■■□□ 2.23
CHKA-206ENST00000531341 FCHSD2O94868 740 aa29.01■■■□□ 2.23
CHKA-206ENST00000531341 CABP4P57796 275 aa29.01■■■□□ 2.23
CHKA-206ENST00000531341 AEBP1Q8IUX7 1158 aa29.01■■■□□ 2.23
CHKA-206ENST00000531341 NMRK2Q9NPI5 230 aa29.01■■■□□ 2.23
CHKA-206ENST00000531341 PTCD1O75127 700 aaKnown RBP29■■■□□ 2.23
CHKA-206ENST00000531341 HSP90AB1P08238 724 aaKnown RBP29■■■□□ 2.23
CHKA-206ENST00000531341 PARP3Q9Y6F1 533 aa29■■■□□ 2.23
CHKA-206ENST00000531341 SRP68Q9UHB9 627 aaKnown RBP28.99■■■□□ 2.23
CHKA-206ENST00000531341 MYH14Q7Z406 1995 aaKnown RBP28.99■■■□□ 2.23
CHKA-206ENST00000531341 TOMM70O94826 608 aa28.98■■■□□ 2.23
CHKA-206ENST00000531341 TRIM26Q12899 539 aaPredicted RBP28.98■■■□□ 2.23
CHKA-206ENST00000531341 PANK3Q9H999 370 aa28.98■■■□□ 2.23
CHKA-206ENST00000531341 MTHFSP49914 203 aa28.97■■■□□ 2.23
CHKA-206ENST00000531341 DNAJC5GQ8N7S2 189 aa28.97■■■□□ 2.23
CHKA-206ENST00000531341 NFATC2IPQ8NCF5 419 aa28.97■■■□□ 2.23
CHKA-206ENST00000531341 AMOTQ4VCS5 1084 aa28.96■■■□□ 2.23
CHKA-206ENST00000531341 CRKLP46109 303 aaKnown RBP28.95■■■□□ 2.22
CHKA-206ENST00000531341 APLP1P51693 650 aa28.95■■■□□ 2.22
CHKA-206ENST00000531341 FKBP8Q14318 412 aa28.95■■■□□ 2.22
CHKA-206ENST00000531341 TIMELESSQ9UNS1 1208 aa28.95■■■□□ 2.22
CHKA-206ENST00000531341 DDR1Q08345 913 aa28.94■■■□□ 2.22
CHKA-206ENST00000531341 C9orf131Q5VYM1 1079 aa28.94■■■□□ 2.22
CHKA-206ENST00000531341 BRCA1P38398 1863 aaKnown RBP28.93■■■□□ 2.22
CHKA-206ENST00000531341 SULT6B1Q6IMI4 303 aa28.91■■■□□ 2.22
CHKA-206ENST00000531341 USP42Q9H9J4 1324 aaKnown RBP28.91■■■□□ 2.22
CHKA-206ENST00000531341 C1orf141Q5JVX7 400 aa28.9■■■□□ 2.22
CHKA-206ENST00000531341 INTS5Q6P9B9 1019 aaKnown RBP28.9■■■□□ 2.22
CHKA-206ENST00000531341 PIM2Q9P1W9 311 aa28.9■■■□□ 2.22
CHKA-206ENST00000531341 HSPA5P11021 654 aaKnown RBP28.89■■■□□ 2.22
CHKA-206ENST00000531341 CHRNA5P30532 468 aa28.89■■■□□ 2.22
CHKA-206ENST00000531341 TJP1Q07157 1748 aa28.87■■■□□ 2.21
CHKA-206ENST00000531341 HTRA3P83110 453 aa28.87■■■□□ 2.21
CHKA-206ENST00000531341 MORC1Q86VD1 984 aa28.87■■■□□ 2.21
CHKA-206ENST00000531341 TM4SF1P30408 202 aa28.86■■■□□ 2.21
CHKA-206ENST00000531341 DALRD3Q5D0E6 543 aaKnown RBP28.86■■■□□ 2.21
CHKA-206ENST00000531341 PCNTO95613 3336 aa28.86■■■□□ 2.21
CHKA-206ENST00000531341 POLRMTO00411 1230 aaKnown RBP28.85■■■□□ 2.21
CHKA-206ENST00000531341 IL13P35225 146 aa28.85■■■□□ 2.21
CHKA-206ENST00000531341 DNAJC10Q8IXB1 793 aa28.84■■■□□ 2.21
CHKA-206ENST00000531341 RBM46Q8TBY0 533 aaKnown RBP28.84■■■□□ 2.21
CHKA-206ENST00000531341 LGR6Q9HBX8 967 aa28.84■■■□□ 2.21
CHKA-206ENST00000531341 ARFGEF1Q9Y6D6 1849 aa28.84■■■□□ 2.21
CHKA-206ENST00000531341 KCPQ6ZWJ8 1503 aa28.84■■■□□ 2.21
CHKA-206ENST00000531341 RNF181Q9P0P0 153 aa28.83■■■□□ 2.21
CHKA-206ENST00000531341 ADAMTS7Q9UKP4 1686 aa28.83■■■□□ 2.21
CHKA-206ENST00000531341 EIF4G2P78344 907 aaKnown RBP eCLIP28.82■■■□□ 2.2
CHKA-206ENST00000531341 USPL1Q5W0Q7 1092 aa28.82■■■□□ 2.2
CHKA-206ENST00000531341 RRAGCQ9HB90 399 aa28.81■■■□□ 2.2
CHKA-206ENST00000531341 SLC39A6Q13433 755 aa28.79■■■□□ 2.2
CHKA-206ENST00000531341 C16orf71Q8IYS4 520 aaPredicted RBP28.79■■■□□ 2.2
CHKA-206ENST00000531341 PCGF6Q9BYE7 350 aa28.79■■■□□ 2.2
CHKA-206ENST00000531341 AKAP4Q5JQC9 854 aa28.78■■■□□ 2.2
CHKA-206ENST00000531341 SLC52A2Q9HAB3 445 aa28.78■■■□□ 2.2
CHKA-206ENST00000531341 SOS1Q07889 1333 aaPredicted RBP28.77■■■□□ 2.2
CHKA-206ENST00000531341 SCN11AQ9UI33 1791 aa28.77■■■□□ 2.2
CHKA-206ENST00000531341 ZPR1O75312 459 aa28.76■■■□□ 2.19
CHKA-206ENST00000531341 CYP19A1P11511 503 aaPredicted RBP28.76■■■□□ 2.19
CHKA-206ENST00000531341 RASSF7Q02833 373 aa28.76■■■□□ 2.19
CHKA-206ENST00000531341 WDR90Q96KV7 1748 aa28.76■■■□□ 2.19
CHKA-206ENST00000531341 KDM2BQ8NHM5 1336 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms