RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 PER1O15534 1290 aaPredicted RBP30.25■■■□□ 2.43
TRAPPC4-210ENST00000531290 SMIM5Q71RC9 77 aa30.25■■■□□ 2.43
TRAPPC4-210ENST00000531290 AMIGO3Q86WK7 504 aa30.25■■■□□ 2.43
TRAPPC4-210ENST00000531290 GNPATO15228 680 aa30.24■■■□□ 2.43
TRAPPC4-210ENST00000531290 CC2D1BQ5T0F9 858 aaKnown RBP30.24■■■□□ 2.43
TRAPPC4-210ENST00000531290 RBM42Q9BTD8 480 aaKnown RBP30.24■■■□□ 2.43
TRAPPC4-210ENST00000531290 UTRNP46939 3433 aa30.24■■■□□ 2.43
TRAPPC4-210ENST00000531290 C5P01031 1676 aa30.23■■■□□ 2.43
TRAPPC4-210ENST00000531290 TUBGCP6Q96RT7 1819 aa30.22■■■□□ 2.43
TRAPPC4-210ENST00000531290 CD2APQ9Y5K6 639 aa30.21■■■□□ 2.43
TRAPPC4-210ENST00000531290 ITGB4P16144 1822 aa30.21■■■□□ 2.43
TRAPPC4-210ENST00000531290 C4BP0C0L5 1744 aa30.2■■■□□ 2.43
TRAPPC4-210ENST00000531290 KDRP35968 1356 aa30.19■■■□□ 2.42
TRAPPC4-210ENST00000531290 ZNF784Q8NCA9 323 aaPredicted RBP30.18■■■□□ 2.42
TRAPPC4-210ENST00000531290 COL24A1Q17RW2 1714 aa30.17■■■□□ 2.42
TRAPPC4-210ENST00000531290 KDM6AO15550 1401 aaPredicted RBP30.17■■■□□ 2.42
TRAPPC4-210ENST00000531290 NFATC2IPQ8NCF5 419 aa30.17■■■□□ 2.42
TRAPPC4-210ENST00000531290 RTCBQ9Y3I0 505 aaKnown RBP30.17■■■□□ 2.42
TRAPPC4-210ENST00000531290 GRIN3BO60391 1043 aa30.16■■■□□ 2.42
TRAPPC4-210ENST00000531290 CNGB1Q14028 1251 aaPredicted RBP30.16■■■□□ 2.42
TRAPPC4-210ENST00000531290 SLC4A9Q96Q91 983 aa30.16■■■□□ 2.42
TRAPPC4-210ENST00000531290 DIAPH1O60610 1272 aaKnown RBP30.15■■■□□ 2.42
TRAPPC4-210ENST00000531290 TRAPPC3LQ5T215 181 aa30.15■■■□□ 2.42
TRAPPC4-210ENST00000531290 HMOX1P09601 288 aa30.14■■■□□ 2.42
TRAPPC4-210ENST00000531290 AKAP4Q5JQC9 854 aa30.14■■■□□ 2.42
TRAPPC4-210ENST00000531290 RC3H1Q5TC82 1133 aaKnown RBP30.14■■■□□ 2.42
TRAPPC4-210ENST00000531290 PTCD1O75127 700 aaKnown RBP30.13■■■□□ 2.41
TRAPPC4-210ENST00000531290 TAF1LQ8IZX4 1826 aa30.11■■■□□ 2.41
TRAPPC4-210ENST00000531290 YBX3P16989 372 aaKnown RBP eCLIP30.11■■■□□ 2.41
TRAPPC4-210ENST00000531290 NPC1L1Q9UHC9 1359 aa30.08■■■□□ 2.41
TRAPPC4-210ENST00000531290 CNTNAP4Q9C0A0 1308 aa30.08■■■□□ 2.41
TRAPPC4-210ENST00000531290 ADRA2BP18089 450 aa30.08■■■□□ 2.41
TRAPPC4-210ENST00000531290 RPS6KA4O75676 772 aa30.07■■■□□ 2.4
TRAPPC4-210ENST00000531290 NLGN1Q8N2Q7 840 aa30.07■■■□□ 2.4
TRAPPC4-210ENST00000531290 ARHGEF1Q92888 912 aaKnown RBP30.07■■■□□ 2.4
TRAPPC4-210ENST00000531290 MMP10P09238 476 aa30.06■■■□□ 2.4
TRAPPC4-210ENST00000531290 RFC4P35249 363 aa30.06■■■□□ 2.4
TRAPPC4-210ENST00000531290 LGR6Q9HBX8 967 aa30.06■■■□□ 2.4
TRAPPC4-210ENST00000531290 SLC52A2Q9HAB3 445 aa30.05■■■□□ 2.4
TRAPPC4-210ENST00000531290 MTHFSDQ2M296 383 aaKnown RBP30.04■■■□□ 2.4
TRAPPC4-210ENST00000531290 GOLGB1Q14789 3259 aaKnown RBP30.04■■■□□ 2.4
TRAPPC4-210ENST00000531290 U2SURPO15042 1029 aaKnown RBP30.03■■■□□ 2.4
TRAPPC4-210ENST00000531290 RNMTO43148 476 aaKnown RBP30.03■■■□□ 2.4
TRAPPC4-210ENST00000531290 UBR3Q6ZT12 1888 aa30.02■■■□□ 2.4
TRAPPC4-210ENST00000531290 CRKLP46109 303 aaKnown RBP30.01■■■□□ 2.39
TRAPPC4-210ENST00000531290 GYS1P13807 737 aa29.98■■■□□ 2.39
TRAPPC4-210ENST00000531290 WWC3Q9ULE0 1092 aa29.97■■■□□ 2.39
TRAPPC4-210ENST00000531290 CFAP53Q96M91 514 aa29.96■■■□□ 2.39
TRAPPC4-210ENST00000531290 SLC39A6Q13433 755 aa29.95■■■□□ 2.39
TRAPPC4-210ENST00000531290 PARP3Q9Y6F1 533 aa29.95■■■□□ 2.39
TRAPPC4-210ENST00000531290 DNAJC10Q8IXB1 793 aa29.94■■■□□ 2.38
TRAPPC4-210ENST00000531290 CCDC87Q9NVE4 849 aa29.94■■■□□ 2.38
TRAPPC4-210ENST00000531290 ZNF831Q5JPB2 1677 aa29.94■■■□□ 2.38
TRAPPC4-210ENST00000531290 TGFB2P61812 414 aa29.93■■■□□ 2.38
TRAPPC4-210ENST00000531290 INTS5Q6P9B9 1019 aaKnown RBP29.93■■■□□ 2.38
TRAPPC4-210ENST00000531290 GAS2L2Q8NHY3 880 aa29.92■■■□□ 2.38
TRAPPC4-210ENST00000531290 CHD4Q14839 1912 aa29.91■■■□□ 2.38
TRAPPC4-210ENST00000531290 SRP68Q9UHB9 627 aaKnown RBP29.91■■■□□ 2.38
TRAPPC4-210ENST00000531290 GNAT3A8MTJ3 354 aa29.89■■■□□ 2.38
TRAPPC4-210ENST00000531290 NUDCQ9Y266 331 aa29.89■■■□□ 2.38
TRAPPC4-210ENST00000531290 COL3A1P02461 1466 aaPredicted RBP29.88■■■□□ 2.37
TRAPPC4-210ENST00000531290 CYP19A1P11511 503 aaPredicted RBP29.88■■■□□ 2.37
TRAPPC4-210ENST00000531290 TEFQ10587 303 aa29.88■■■□□ 2.37
TRAPPC4-210ENST00000531290 TTC5Q8N0Z6 440 aa29.88■■■□□ 2.37
TRAPPC4-210ENST00000531290 USP42Q9H9J4 1324 aaKnown RBP29.88■■■□□ 2.37
TRAPPC4-210ENST00000531290 A0A0G2JLW4 131 aa29.87■■■□□ 2.37
TRAPPC4-210ENST00000531290 ZPR1O75312 459 aa29.87■■■□□ 2.37
TRAPPC4-210ENST00000531290 GIGYF1O75420 1035 aaPredicted RBP29.87■■■□□ 2.37
TRAPPC4-210ENST00000531290 C1QTNF8P60827 252 aa29.87■■■□□ 2.37
TRAPPC4-210ENST00000531290 FKBP8Q14318 412 aa29.87■■■□□ 2.37
TRAPPC4-210ENST00000531290 VSIG10Q8N0Z9 540 aa29.87■■■□□ 2.37
TRAPPC4-210ENST00000531290 MRC1P22897 1456 aa29.86■■■□□ 2.37
TRAPPC4-210ENST00000531290 IL17REQ8NFR9 667 aa29.85■■■□□ 2.37
TRAPPC4-210ENST00000531290 PPP2R1AP30153 589 aa29.84■■■□□ 2.37
TRAPPC4-210ENST00000531290 COL5A3P25940 1745 aaPredicted RBP29.84■■■□□ 2.37
TRAPPC4-210ENST00000531290 CICQ96RK0 1608 aaPredicted RBP29.83■■■□□ 2.37
TRAPPC4-210ENST00000531290 SOS1Q07889 1333 aaPredicted RBP29.83■■■□□ 2.37
TRAPPC4-210ENST00000531290 PRKAR2BP31323 418 aa29.83■■■□□ 2.37
TRAPPC4-210ENST00000531290 BCS1LQ9Y276 419 aa29.83■■■□□ 2.37
TRAPPC4-210ENST00000531290 SCN11AQ9UI33 1791 aa29.82■■■□□ 2.36
TRAPPC4-210ENST00000531290 C10orf71Q711Q0 1435 aa29.82■■■□□ 2.36
TRAPPC4-210ENST00000531290 STARD3NLO95772 234 aa29.82■■■□□ 2.36
TRAPPC4-210ENST00000531290 DPEP1P16444 411 aa29.82■■■□□ 2.36
TRAPPC4-210ENST00000531290 PXDNLA1KZ92 1463 aa29.81■■■□□ 2.36
TRAPPC4-210ENST00000531290 U2AF1L5P0DN76 240 aaPredicted RBP29.81■■■□□ 2.36
TRAPPC4-210ENST00000531290 U2AF1Q01081 240 aaKnown RBP eCLIP29.81■■■□□ 2.36
TRAPPC4-210ENST00000531290 USPL1Q5W0Q7 1092 aa29.81■■■□□ 2.36
TRAPPC4-210ENST00000531290 PHACTR3Q96KR7 559 aa29.81■■■□□ 2.36
TRAPPC4-210ENST00000531290 RSPH6AQ9H0K4 717 aa29.81■■■□□ 2.36
TRAPPC4-210ENST00000531290 ZBTB1Q9Y2K1 713 aa29.8■■■□□ 2.36
TRAPPC4-210ENST00000531290 DDR1Q08345 913 aa29.79■■■□□ 2.36
TRAPPC4-210ENST00000531290 ZNF790Q6PG37 636 aa29.79■■■□□ 2.36
TRAPPC4-210ENST00000531290 ATP10DQ9P241 1426 aa29.79■■■□□ 2.36
TRAPPC4-210ENST00000531290 CANXP27824 592 aaKnown RBP29.78■■■□□ 2.36
TRAPPC4-210ENST00000531290 TM4SF1P30408 202 aa29.78■■■□□ 2.36
TRAPPC4-210ENST00000531290 NARFQ9UHQ1 456 aa29.78■■■□□ 2.36
TRAPPC4-210ENST00000531290 MYH14Q7Z406 1995 aaKnown RBP29.77■■■□□ 2.36
TRAPPC4-210ENST00000531290 KCPQ6ZWJ8 1503 aa29.77■■■□□ 2.36
TRAPPC4-210ENST00000531290 FCHSD2O94868 740 aa29.77■■■□□ 2.36
TRAPPC4-210ENST00000531290 ZNF496Q96IT1 587 aaPredicted RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms