RNA–Protein interactions for RNA: ENST00000531285.1

TRNP1-202, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene TRNP1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-202ENST00000531285 POLR3GLQ9BT43 218 aa29.5■■■□□ 2.31
TRNP1-202ENST00000531285 KIF13BQ9NQT8 1826 aa29.5■■■□□ 2.31
TRNP1-202ENST00000531285 KIAA1551Q9HCM1 1747 aa29.48■■■□□ 2.31
TRNP1-202ENST00000531285 N4BP2Q86UW6 1770 aaPredicted RBP29.48■■■□□ 2.31
TRNP1-202ENST00000531285 KDRP35968 1356 aa29.48■■■□□ 2.31
TRNP1-202ENST00000531285 CICQ96RK0 1608 aaPredicted RBP29.47■■■□□ 2.31
TRNP1-202ENST00000531285 MMP10P09238 476 aa29.47■■■□□ 2.31
TRNP1-202ENST00000531285 TRIM26Q12899 539 aaPredicted RBP29.47■■■□□ 2.31
TRNP1-202ENST00000531285 COL5A3P25940 1745 aaPredicted RBP29.47■■■□□ 2.31
TRNP1-202ENST00000531285 ZNF831Q5JPB2 1677 aa29.46■■■□□ 2.31
TRNP1-202ENST00000531285 PXDNLA1KZ92 1463 aa29.44■■■□□ 2.3
TRNP1-202ENST00000531285 PLEKHG2Q9H7P9 1386 aa29.43■■■□□ 2.3
TRNP1-202ENST00000531285 SLC4A9Q96Q91 983 aa29.43■■■□□ 2.3
TRNP1-202ENST00000531285 RBM42Q9BTD8 480 aaKnown RBP29.43■■■□□ 2.3
TRNP1-202ENST00000531285 RTCBQ9Y3I0 505 aaKnown RBP29.43■■■□□ 2.3
TRNP1-202ENST00000531285 HSPA6P17066 643 aa29.42■■■□□ 2.3
TRNP1-202ENST00000531285 TRAPPC3LQ5T215 181 aa29.42■■■□□ 2.3
TRNP1-202ENST00000531285 ERVV-2B6SEH9 535 aa29.4■■■□□ 2.3
TRNP1-202ENST00000531285 C4AP0C0L4 1744 aa29.4■■■□□ 2.3
TRNP1-202ENST00000531285 TIMELESSQ9UNS1 1208 aa29.39■■■□□ 2.3
TRNP1-202ENST00000531285 KDM6AO15550 1401 aaPredicted RBP29.38■■■□□ 2.29
TRNP1-202ENST00000531285 C10orf71Q711Q0 1435 aa29.38■■■□□ 2.29
TRNP1-202ENST00000531285 IFFO2Q5TF58 517 aa29.38■■■□□ 2.29
TRNP1-202ENST00000531285 NLGN1Q8N2Q7 840 aa29.38■■■□□ 2.29
TRNP1-202ENST00000531285 DCAF5Q96JK2 942 aa29.38■■■□□ 2.29
TRNP1-202ENST00000531285 MYH14Q7Z406 1995 aaKnown RBP29.37■■■□□ 2.29
TRNP1-202ENST00000531285 HSP90AB1P08238 724 aaKnown RBP29.37■■■□□ 2.29
TRNP1-202ENST00000531285 ARHGEF1Q92888 912 aaKnown RBP29.37■■■□□ 2.29
TRNP1-202ENST00000531285 KIF3CO14782 793 aa29.36■■■□□ 2.29
TRNP1-202ENST00000531285 TGFB2P61812 414 aa29.36■■■□□ 2.29
TRNP1-202ENST00000531285 PLEKHO1Q53GL0 409 aaPredicted RBP29.36■■■□□ 2.29
TRNP1-202ENST00000531285 BCS1LQ9Y276 419 aa29.36■■■□□ 2.29
TRNP1-202ENST00000531285 CNTNAP4Q9C0A0 1308 aa29.36■■■□□ 2.29
TRNP1-202ENST00000531285 BRCA1P38398 1863 aaKnown RBP29.36■■■□□ 2.29
TRNP1-202ENST00000531285 A0A0G2JLW4 131 aa29.35■■■□□ 2.29
TRNP1-202ENST00000531285 RC3H1Q5TC82 1133 aaKnown RBP29.35■■■□□ 2.29
TRNP1-202ENST00000531285 ZNF530Q6P9A1 599 aaPredicted RBP29.35■■■□□ 2.29
TRNP1-202ENST00000531285 ADRA2BP18089 450 aa29.34■■■□□ 2.29
TRNP1-202ENST00000531285 CABP4P57796 275 aa29.34■■■□□ 2.29
TRNP1-202ENST00000531285 GYS1P13807 737 aa29.33■■■□□ 2.29
TRNP1-202ENST00000531285 RFC4P35249 363 aa29.33■■■□□ 2.29
TRNP1-202ENST00000531285 CCDC87Q9NVE4 849 aa29.33■■■□□ 2.29
TRNP1-202ENST00000531285 RPS6KA4O75676 772 aa29.32■■■□□ 2.28
TRNP1-202ENST00000531285 AEBP1Q8IUX7 1158 aa29.31■■■□□ 2.28
TRNP1-202ENST00000531285 PANK3Q9H999 370 aa29.31■■■□□ 2.28
TRNP1-202ENST00000531285 DPEP1P16444 411 aa29.3■■■□□ 2.28
TRNP1-202ENST00000531285 AMOTQ4VCS5 1084 aa29.3■■■□□ 2.28
TRNP1-202ENST00000531285 PARP3Q9Y6F1 533 aa29.3■■■□□ 2.28
TRNP1-202ENST00000531285 TJP1Q07157 1748 aa29.29■■■□□ 2.28
TRNP1-202ENST00000531285 ARHGAP27Q6ZUM4 889 aa29.29■■■□□ 2.28
TRNP1-202ENST00000531285 PTCD1O75127 700 aaKnown RBP29.28■■■□□ 2.28
TRNP1-202ENST00000531285 MTHFSP49914 203 aa29.28■■■□□ 2.28
TRNP1-202ENST00000531285 ARFGEF1Q9Y6D6 1849 aa29.27■■■□□ 2.28
TRNP1-202ENST00000531285 FCHSD2O94868 740 aa29.27■■■□□ 2.28
TRNP1-202ENST00000531285 C1orf141Q5JVX7 400 aa29.27■■■□□ 2.28
TRNP1-202ENST00000531285 SCN11AQ9UI33 1791 aa29.26■■■□□ 2.27
TRNP1-202ENST00000531285 HSPA5P11021 654 aaKnown RBP29.25■■■□□ 2.27
TRNP1-202ENST00000531285 EIF4G2P78344 907 aaKnown RBP eCLIP29.25■■■□□ 2.27
TRNP1-202ENST00000531285 NFATC2IPQ8NCF5 419 aa29.25■■■□□ 2.27
TRNP1-202ENST00000531285 CRKLP46109 303 aaKnown RBP29.24■■■□□ 2.27
TRNP1-202ENST00000531285 MORC1Q86VD1 984 aa29.24■■■□□ 2.27
TRNP1-202ENST00000531285 SRP68Q9UHB9 627 aaKnown RBP29.24■■■□□ 2.27
TRNP1-202ENST00000531285 CLSPNQ9HAW4 1339 aa29.23■■■□□ 2.27
TRNP1-202ENST00000531285 PCGF6Q9BYE7 350 aa29.23■■■□□ 2.27
TRNP1-202ENST00000531285 SULT6B1Q6IMI4 303 aa29.22■■■□□ 2.27
TRNP1-202ENST00000531285 KCNA3P22001 575 aa29.21■■■□□ 2.27
TRNP1-202ENST00000531285 TOMM70O94826 608 aa29.2■■■□□ 2.26
TRNP1-202ENST00000531285 FKBP8Q14318 412 aa29.2■■■□□ 2.26
TRNP1-202ENST00000531285 NMRK2Q9NPI5 230 aa29.2■■■□□ 2.26
TRNP1-202ENST00000531285 USP42Q9H9J4 1324 aaKnown RBP29.2■■■□□ 2.26
TRNP1-202ENST00000531285 ADAMTS7Q9UKP4 1686 aa29.19■■■□□ 2.26
TRNP1-202ENST00000531285 VIRMAQ69YN4 1812 aaKnown RBP29.18■■■□□ 2.26
TRNP1-202ENST00000531285 APLP1P51693 650 aa29.18■■■□□ 2.26
TRNP1-202ENST00000531285 DDR1Q08345 913 aa29.18■■■□□ 2.26
TRNP1-202ENST00000531285 C9orf131Q5VYM1 1079 aa29.17■■■□□ 2.26
TRNP1-202ENST00000531285 PIM2Q9P1W9 311 aa29.17■■■□□ 2.26
TRNP1-202ENST00000531285 IL13P35225 146 aa29.15■■■□□ 2.26
TRNP1-202ENST00000531285 DALRD3Q5D0E6 543 aaKnown RBP29.14■■■□□ 2.26
TRNP1-202ENST00000531285 INTS5Q6P9B9 1019 aaKnown RBP29.14■■■□□ 2.26
TRNP1-202ENST00000531285 KNSTRNQ9Y448 316 aa29.13■■■□□ 2.25
TRNP1-202ENST00000531285 WDR90Q96KV7 1748 aa29.12■■■□□ 2.25
TRNP1-202ENST00000531285 CHRNA5P30532 468 aa29.12■■■□□ 2.25
TRNP1-202ENST00000531285 DNAJC10Q8IXB1 793 aa29.12■■■□□ 2.25
TRNP1-202ENST00000531285 AFDNP55196 1824 aaKnown RBP29.1■■■□□ 2.25
TRNP1-202ENST00000531285 SBF1O95248 1867 aa29.1■■■□□ 2.25
TRNP1-202ENST00000531285 KCPQ6ZWJ8 1503 aa29.1■■■□□ 2.25
TRNP1-202ENST00000531285 POLRMTO00411 1230 aaKnown RBP29.1■■■□□ 2.25
TRNP1-202ENST00000531285 AKAP4Q5JQC9 854 aa29.1■■■□□ 2.25
TRNP1-202ENST00000531285 SLC52A2Q9HAB3 445 aa29.09■■■□□ 2.25
TRNP1-202ENST00000531285 LGR6Q9HBX8 967 aa29.09■■■□□ 2.25
TRNP1-202ENST00000531285 MRC1P22897 1456 aa29.09■■■□□ 2.25
TRNP1-202ENST00000531285 ZPR1O75312 459 aa29.08■■■□□ 2.25
TRNP1-202ENST00000531285 TM4SF1P30408 202 aa29.08■■■□□ 2.25
TRNP1-202ENST00000531285 USPL1Q5W0Q7 1092 aa29.08■■■□□ 2.25
TRNP1-202ENST00000531285 RNF181Q9P0P0 153 aa29.08■■■□□ 2.25
TRNP1-202ENST00000531285 SOS1Q07889 1333 aaPredicted RBP29.07■■■□□ 2.24
TRNP1-202ENST00000531285 C16orf71Q8IYS4 520 aaPredicted RBP29.07■■■□□ 2.24
TRNP1-202ENST00000531285 DNAJC5GQ8N7S2 189 aa29.07■■■□□ 2.24
TRNP1-202ENST00000531285 RBM46Q8TBY0 533 aaKnown RBP29.07■■■□□ 2.24
TRNP1-202ENST00000531285 SLC39A6Q13433 755 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms