RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 FHDC1Q9C0D6 1143 aaPredicted RBP10.29□□□□□ -0.76
CHEK1-211ENST00000531062 DNMT3LQ9UJW3 386 aa10.29□□□□□ -0.76
CHEK1-211ENST00000531062 KIAA1024Q9UPX6 916 aa10.29□□□□□ -0.76
CHEK1-211ENST00000531062 FAM196BA6NMK8 535 aa10.28□□□□□ -0.76
CHEK1-211ENST00000531062 GTF2E1P29083 439 aaPredicted RBP10.28□□□□□ -0.76
CHEK1-211ENST00000531062 PTK7Q13308 1070 aa10.28□□□□□ -0.76
CHEK1-211ENST00000531062 SERTAD1Q9UHV2 236 aa10.28□□□□□ -0.76
CHEK1-211ENST00000531062 USP17L15C9J2P7 530 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 USP17L10C9JJH3 530 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 USP17L13C9JLJ4 530 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 USP17L12C9JPN9 530 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 USP17L11C9JVI0 530 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 USP17L21D6R901 530 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 USP17L18D6R9N7 530 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 USP17L22D6RA61 530 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 USP17L17D6RBQ6 530 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 USP17L19D6RCP7 530 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 USP17L20D6RJB6 530 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 CENPCQ03188 943 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 USP17L24Q0WX57 530 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 CRTC2Q53ET0 693 aaPredicted RBP10.27□□□□□ -0.77
CHEK1-211ENST00000531062 SLC27A3Q5K4L6 730 aa10.27□□□□□ -0.77
CHEK1-211ENST00000531062 BACH1O14867 736 aa10.26□□□□□ -0.77
CHEK1-211ENST00000531062 PPP1R15AO75807 674 aaPredicted RBP10.26□□□□□ -0.77
CHEK1-211ENST00000531062 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.26□□□□□ -0.77
CHEK1-211ENST00000531062 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.25□□□□□ -0.77
CHEK1-211ENST00000531062 ZNF775Q96BV0 537 aaPredicted RBP10.25□□□□□ -0.77
CHEK1-211ENST00000531062 FIGNL2A6NMB9 653 aa10.24□□□□□ -0.77
CHEK1-211ENST00000531062 SPATA31C2B4DYI2 1134 aa10.24□□□□□ -0.77
CHEK1-211ENST00000531062 M0R2N6 131 aa10.24□□□□□ -0.77
CHEK1-211ENST00000531062 MAN1A2O60476 641 aa10.24□□□□□ -0.77
CHEK1-211ENST00000531062 MTFR1Q15390 333 aa10.24□□□□□ -0.77
CHEK1-211ENST00000531062 TLR1Q15399 786 aa10.24□□□□□ -0.77
CHEK1-211ENST00000531062 ANKMY2Q8IV38 441 aa10.24□□□□□ -0.77
CHEK1-211ENST00000531062 FAM200AQ8TCP9 573 aa10.24□□□□□ -0.77
CHEK1-211ENST00000531062 ZNF358Q9NW07 568 aa10.24□□□□□ -0.77
CHEK1-211ENST00000531062 SOBPA7XYQ1 873 aa10.23□□□□□ -0.77
CHEK1-211ENST00000531062 SFI1A8K8P3 1242 aa10.23□□□□□ -0.77
CHEK1-211ENST00000531062 SMTNP53814 917 aa10.23□□□□□ -0.77
CHEK1-211ENST00000531062 SEC13P55735 322 aa10.23□□□□□ -0.77
CHEK1-211ENST00000531062 DPYDQ12882 1025 aa10.23□□□□□ -0.77
CHEK1-211ENST00000531062 WDR44Q5JSH3 913 aa10.23□□□□□ -0.77
CHEK1-211ENST00000531062 ARXQ96QS3 562 aa10.23□□□□□ -0.77
CHEK1-211ENST00000531062 NOVA2Q9UNW9 492 aaKnown RBP10.23□□□□□ -0.77
CHEK1-211ENST00000531062 ATG7O95352 703 aa10.22□□□□□ -0.77
CHEK1-211ENST00000531062 EPHA4P54764 986 aa10.22□□□□□ -0.77
CHEK1-211ENST00000531062 ELOAQ14241 798 aaKnown RBP10.22□□□□□ -0.77
CHEK1-211ENST00000531062 TMEM214Q6NUQ4 689 aaKnown RBP10.22□□□□□ -0.77
CHEK1-211ENST00000531062 LYSMD3Q7Z3D4 306 aa10.22□□□□□ -0.77
CHEK1-211ENST00000531062 PPARGC1BQ86YN6 1023 aaKnown RBP10.22□□□□□ -0.77
CHEK1-211ENST00000531062 ZNF295-AS1Q8N0V1 137 aa10.22□□□□□ -0.77
CHEK1-211ENST00000531062 ZSCAN10Q96SZ4 725 aaPredicted RBP10.22□□□□□ -0.77
CHEK1-211ENST00000531062 HINFPQ9BQA5 517 aa10.22□□□□□ -0.77
CHEK1-211ENST00000531062 IQSEC3Q9UPP2 1182 aaPredicted RBP10.21□□□□□ -0.77
CHEK1-211ENST00000531062 A6NJY4 79 aa10.2□□□□□ -0.78
CHEK1-211ENST00000531062 CDK2AP1O14519 115 aa10.2□□□□□ -0.78
CHEK1-211ENST00000531062 CSB-PGBD3P0DP91 1061 aa10.2□□□□□ -0.78
CHEK1-211ENST00000531062 FOXK2Q01167 660 aa10.2□□□□□ -0.78
CHEK1-211ENST00000531062 PRICKLE2Q7Z3G6 844 aa10.2□□□□□ -0.78
CHEK1-211ENST00000531062 GNASQ5JWF2 1037 aa10.19□□□□□ -0.78
CHEK1-211ENST00000531062 SCHIP1Q9P0W5 487 aaPredicted RBP10.19□□□□□ -0.78
CHEK1-211ENST00000531062 SENP3-EIF4A1A0A087X0R7 540 aa10.18□□□□□ -0.78
CHEK1-211ENST00000531062 NBPF10Q6P3W6 841 aaKnown RBP10.18□□□□□ -0.78
CHEK1-211ENST00000531062 NBPF15Q8N660 670 aa10.18□□□□□ -0.78
CHEK1-211ENST00000531062 SLC35F4A4IF30 521 aa10.17□□□□□ -0.78
CHEK1-211ENST00000531062 PTSQ03393 145 aa10.17□□□□□ -0.78
CHEK1-211ENST00000531062 POU4F2Q12837 409 aa10.17□□□□□ -0.78
CHEK1-211ENST00000531062 TNS4Q8IZW8 715 aa10.17□□□□□ -0.78
CHEK1-211ENST00000531062 TSEN2Q8NCE0 465 aaKnown RBP10.17□□□□□ -0.78
CHEK1-211ENST00000531062 NPAS3Q8IXF0 933 aa10.16□□□□□ -0.78
CHEK1-211ENST00000531062 ZMIZ1Q9ULJ6 1067 aa10.16□□□□□ -0.78
CHEK1-211ENST00000531062 C4orf17Q53FE4 359 aa10.15□□□□□ -0.78
CHEK1-211ENST00000531062 TAS1R3Q7RTX0 852 aa10.15□□□□□ -0.78
CHEK1-211ENST00000531062 RHBDD1Q8TEB9 315 aa10.15□□□□□ -0.78
CHEK1-211ENST00000531062 STK32AQ8WU08 396 aa10.15□□□□□ -0.78
CHEK1-211ENST00000531062 CHMP3Q9Y3E7 222 aa10.15□□□□□ -0.78
CHEK1-211ENST00000531062 USP3Q9Y6I4 520 aa10.15□□□□□ -0.78
CHEK1-211ENST00000531062 RHOQP17081 205 aa10.14□□□□□ -0.79
CHEK1-211ENST00000531062 FAM69CQ0P6D2 419 aa10.14□□□□□ -0.79
CHEK1-211ENST00000531062 POTEAQ6S8J7 498 aa10.14□□□□□ -0.79
CHEK1-211ENST00000531062 CABP1Q9NZU7 370 aa10.14□□□□□ -0.79
CHEK1-211ENST00000531062 NXF1Q9UBU9 619 aaKnown RBP10.14□□□□□ -0.79
CHEK1-211ENST00000531062 LGR5O75473 907 aa10.13□□□□□ -0.79
CHEK1-211ENST00000531062 PHKA2P46019 1235 aa10.13□□□□□ -0.79
CHEK1-211ENST00000531062 NIFKQ9BYG3 293 aaKnown RBP10.13□□□□□ -0.79
CHEK1-211ENST00000531062 DYRK1BQ9Y463 629 aa10.13□□□□□ -0.79
CHEK1-211ENST00000531062 TBCELQ5QJ74 424 aa10.12□□□□□ -0.79
CHEK1-211ENST00000531062 TMEM164Q5U3C3 297 aa10.12□□□□□ -0.79
CHEK1-211ENST00000531062 SLC9A9Q8IVB4 645 aa10.12□□□□□ -0.79
CHEK1-211ENST00000531062 CCDC155Q8N6L0 562 aa10.12□□□□□ -0.79
CHEK1-211ENST00000531062 C21orf2O43822 256 aa10.11□□□□□ -0.79
CHEK1-211ENST00000531062 PPFIA3O75145 1194 aa10.11□□□□□ -0.79
CHEK1-211ENST00000531062 TEAD4Q15561 434 aa10.11□□□□□ -0.79
CHEK1-211ENST00000531062 GAS2L2Q8NHY3 880 aa10.11□□□□□ -0.79
CHEK1-211ENST00000531062 CHMP7Q8WUX9 453 aaPredicted RBP10.11□□□□□ -0.79
CHEK1-211ENST00000531062 ZNF232Q9UNY5 417 aa10.11□□□□□ -0.79
CHEK1-211ENST00000531062 TERTO14746 1132 aaKnown RBP10.1□□□□□ -0.79
CHEK1-211ENST00000531062 PLA2G4AP47712 749 aa10.1□□□□□ -0.79
CHEK1-211ENST00000531062 SWI5Q1ZZU3 235 aa10.1□□□□□ -0.79
CHEK1-211ENST00000531062 ZDHHC1Q8WTX9 485 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms