RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 CT47B1P0C2W7 299 aaPredicted RBP12.84□□□□□ -0.35
CTNND1-228ENST00000531007 NEUROD2Q15784 382 aa12.84□□□□□ -0.35
CTNND1-228ENST00000531007 DUSP27Q5VZP5 1158 aa12.84□□□□□ -0.35
CTNND1-228ENST00000531007 PHACTR3Q96KR7 559 aa12.84□□□□□ -0.35
CTNND1-228ENST00000531007 BOLA1Q9Y3E2 137 aa12.84□□□□□ -0.35
CTNND1-228ENST00000531007 LMO7Q8WWI1 1683 aa12.83□□□□□ -0.35
CTNND1-228ENST00000531007 ZBTB7CA1YPR0 619 aa12.83□□□□□ -0.36
CTNND1-228ENST00000531007 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
CTNND1-228ENST00000531007 CABLES1Q8TDN4 633 aa12.83□□□□□ -0.36
CTNND1-228ENST00000531007 LTV1Q96GA3 475 aaPredicted RBP12.83□□□□□ -0.36
CTNND1-228ENST00000531007 AXIN2Q9Y2T1 843 aa12.83□□□□□ -0.36
CTNND1-228ENST00000531007 RRP7AQ9Y3A4 280 aaKnown RBP12.83□□□□□ -0.36
CTNND1-228ENST00000531007 NEFLP07196 543 aa12.82□□□□□ -0.36
CTNND1-228ENST00000531007 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
CTNND1-228ENST00000531007 NBPF6Q5VWK0 638 aa12.82□□□□□ -0.36
CTNND1-228ENST00000531007 NBPF4Q96M43 638 aa12.82□□□□□ -0.36
CTNND1-228ENST00000531007 WDR17Q8IZU2 1322 aa12.82□□□□□ -0.36
CTNND1-228ENST00000531007 GNAI1P63096 354 aa12.81□□□□□ -0.36
CTNND1-228ENST00000531007 RTF1Q92541 710 aaKnown RBP12.81□□□□□ -0.36
CTNND1-228ENST00000531007 CDCA7LQ96GN5 454 aa12.81□□□□□ -0.36
CTNND1-228ENST00000531007 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
CTNND1-228ENST00000531007 COL14A1Q05707 1796 aaKnown RBP12.81□□□□□ -0.36
CTNND1-228ENST00000531007 CSB-PGBD3P0DP91 1061 aa12.8□□□□□ -0.36
CTNND1-228ENST00000531007 ERICH6BQ5W0A0 696 aa12.8□□□□□ -0.36
CTNND1-228ENST00000531007 HS6ST3Q8IZP7 471 aa12.8□□□□□ -0.36
CTNND1-228ENST00000531007 ZNF428Q96B54 188 aa12.8□□□□□ -0.36
CTNND1-228ENST00000531007 BABAM1Q9NWV8 329 aa12.8□□□□□ -0.36
CTNND1-228ENST00000531007 JCADQ9P266 1359 aa12.8□□□□□ -0.36
CTNND1-228ENST00000531007 COL5A2P05997 1499 aaPredicted RBP12.79□□□□□ -0.36
CTNND1-228ENST00000531007 GNAT3A8MTJ3 354 aa12.79□□□□□ -0.36
CTNND1-228ENST00000531007 MTHFSDQ2M296 383 aaKnown RBP12.79□□□□□ -0.36
CTNND1-228ENST00000531007 RAPGEF4Q8WZA2 1011 aa12.79□□□□□ -0.36
CTNND1-228ENST00000531007 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
CTNND1-228ENST00000531007 RCAN3Q9UKA8 241 aa12.79□□□□□ -0.36
CTNND1-228ENST00000531007 RNF123Q5XPI4 1314 aa12.79□□□□□ -0.36
CTNND1-228ENST00000531007 TATP17735 454 aaPredicted RBP12.78□□□□□ -0.36
CTNND1-228ENST00000531007 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
CTNND1-228ENST00000531007 CARD10Q9BWT7 1032 aa12.78□□□□□ -0.36
CTNND1-228ENST00000531007 NLRP2Q9NX02 1062 aa12.78□□□□□ -0.36
CTNND1-228ENST00000531007 RGPD5Q99666 1765 aa12.78□□□□□ -0.36
CTNND1-228ENST00000531007 MAP3K5Q99683 1374 aa12.78□□□□□ -0.36
CTNND1-228ENST00000531007 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
CTNND1-228ENST00000531007 FAM83GA6ND36 823 aa12.77□□□□□ -0.37
CTNND1-228ENST00000531007 EVA1CP58658 441 aa12.77□□□□□ -0.37
CTNND1-228ENST00000531007 CHRNA2Q15822 529 aa12.77□□□□□ -0.37
CTNND1-228ENST00000531007 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
CTNND1-228ENST00000531007 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.77□□□□□ -0.37
CTNND1-228ENST00000531007 FBXO22Q8NEZ5 403 aa12.77□□□□□ -0.37
CTNND1-228ENST00000531007 MFRPQ9BY79 579 aa12.77□□□□□ -0.37
CTNND1-228ENST00000531007 SPG7Q9UQ90 795 aa12.77□□□□□ -0.37
CTNND1-228ENST00000531007 SUPT16HQ9Y5B9 1047 aaKnown RBP12.77□□□□□ -0.37
CTNND1-228ENST00000531007 DLG5Q8TDM6 1919 aa12.77□□□□□ -0.37
CTNND1-228ENST00000531007 SPATA31A6Q5VVP1 1343 aa12.77□□□□□ -0.37
CTNND1-228ENST00000531007 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
CTNND1-228ENST00000531007 ZNF853P0CG23 659 aa12.76□□□□□ -0.37
CTNND1-228ENST00000531007 RGPD2P0DJD1 1756 aa12.75□□□□□ -0.37
CTNND1-228ENST00000531007 CRB1P82279 1406 aa12.75□□□□□ -0.37
CTNND1-228ENST00000531007 SOS1Q07889 1333 aaPredicted RBP12.75□□□□□ -0.37
CTNND1-228ENST00000531007 C1orf141Q5JVX7 400 aa12.75□□□□□ -0.37
CTNND1-228ENST00000531007 TOM1L2Q6ZVM7 507 aa12.75□□□□□ -0.37
CTNND1-228ENST00000531007 TMEM121BQ9BXQ6 578 aaPredicted RBP12.75□□□□□ -0.37
CTNND1-228ENST00000531007 FANCIQ9NVI1 1328 aa12.74□□□□□ -0.37
CTNND1-228ENST00000531007 HSP90AB1P08238 724 aaKnown RBP12.74□□□□□ -0.37
CTNND1-228ENST00000531007 USHBP1Q8N6Y0 703 aa12.74□□□□□ -0.37
CTNND1-228ENST00000531007 CHMP4AQ9BY43 222 aa12.74□□□□□ -0.37
CTNND1-228ENST00000531007 GTF3C3Q9Y5Q9 886 aa12.74□□□□□ -0.37
CTNND1-228ENST00000531007 CEMIPQ8WUJ3 1361 aa12.73□□□□□ -0.37
CTNND1-228ENST00000531007 CHL1O00533 1208 aa12.73□□□□□ -0.37
CTNND1-228ENST00000531007 CDCA7Q9BWT1 371 aaPredicted RBP12.73□□□□□ -0.37
CTNND1-228ENST00000531007 BTG4Q9NY30 223 aa12.73□□□□□ -0.37
CTNND1-228ENST00000531007 THRAP3Q9Y2W1 955 aaKnown RBP12.73□□□□□ -0.37
CTNND1-228ENST00000531007 PARP4Q9UKK3 1724 aaKnown RBP12.73□□□□□ -0.37
CTNND1-228ENST00000531007 NWD2Q9ULI1 1742 aa12.73□□□□□ -0.37
CTNND1-228ENST00000531007 ZNF530Q6P9A1 599 aaPredicted RBP12.72□□□□□ -0.37
CTNND1-228ENST00000531007 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
CTNND1-228ENST00000531007 IFNL2Q8IZJ0 200 aa12.72□□□□□ -0.37
CTNND1-228ENST00000531007 LRRC37A3O60309 1634 aa12.72□□□□□ -0.37
CTNND1-228ENST00000531007 PKD1L3Q7Z443 1732 aa12.71□□□□□ -0.37
CTNND1-228ENST00000531007 IL2RBP14784 551 aa12.71□□□□□ -0.37
CTNND1-228ENST00000531007 RRP1P56182 461 aaKnown RBP12.71□□□□□ -0.37
CTNND1-228ENST00000531007 ALDH1L2Q3SY69 923 aa12.71□□□□□ -0.37
CTNND1-228ENST00000531007 PCDH11XQ9BZA7 1347 aa12.7□□□□□ -0.38
CTNND1-228ENST00000531007 PCDH11YQ9BZA8 1340 aa12.7□□□□□ -0.38
CTNND1-228ENST00000531007 BRPF1P55201 1214 aaPredicted RBP12.7□□□□□ -0.38
CTNND1-228ENST00000531007 TAF7Q15545 349 aaPredicted RBP12.7□□□□□ -0.38
CTNND1-228ENST00000531007 MCM10Q7L590 875 aa12.7□□□□□ -0.38
CTNND1-228ENST00000531007 FAM163AQ96GL9 167 aaPredicted RBP12.7□□□□□ -0.38
CTNND1-228ENST00000531007 MBIPQ9NS73 344 aa12.7□□□□□ -0.38
CTNND1-228ENST00000531007 ADAMTS7Q9UKP4 1686 aa12.7□□□□□ -0.38
CTNND1-228ENST00000531007 MEGF6O75095 1541 aa12.69□□□□□ -0.38
CTNND1-228ENST00000531007 SLIT2O94813 1529 aa12.69□□□□□ -0.38
CTNND1-228ENST00000531007 NUTM2BA6NNL0 878 aaPredicted RBP12.69□□□□□ -0.38
CTNND1-228ENST00000531007 NUTM2EB1AL46 878 aaPredicted RBP12.69□□□□□ -0.38
CTNND1-228ENST00000531007 SNPHO15079 494 aa12.69□□□□□ -0.38
CTNND1-228ENST00000531007 MS4A1P11836 297 aa12.69□□□□□ -0.38
CTNND1-228ENST00000531007 EXOSC9Q06265 439 aaKnown RBP12.69□□□□□ -0.38
CTNND1-228ENST00000531007 MEX3CQ5U5Q3 659 aaKnown RBP12.69□□□□□ -0.38
CTNND1-228ENST00000531007 LARP1Q6PKG0 1096 aaKnown RBP12.69□□□□□ -0.38
CTNND1-228ENST00000531007 NUTM2AQ8IVF1 878 aaPredicted RBP12.69□□□□□ -0.38
CTNND1-228ENST00000531007 STRN4Q9NRL3 753 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms