RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ITPK1Q13572 414 aa21.68■■□□□ 1.06
CHMP4A-204ENST00000530996 CCER1Q8TC90 406 aaPredicted RBP21.68■■□□□ 1.06
CHMP4A-204ENST00000530996 PLEKHG2Q9H7P9 1386 aa21.67■■□□□ 1.06
CHMP4A-204ENST00000530996 ZNF530Q6P9A1 599 aaPredicted RBP21.67■■□□□ 1.06
CHMP4A-204ENST00000530996 RBM42Q9BTD8 480 aaKnown RBP21.67■■□□□ 1.06
CHMP4A-204ENST00000530996 UBR3Q6ZT12 1888 aa21.66■■□□□ 1.06
CHMP4A-204ENST00000530996 HSP90AB1P08238 724 aaKnown RBP21.66■■□□□ 1.06
CHMP4A-204ENST00000530996 MORC1Q86VD1 984 aa21.66■■□□□ 1.06
CHMP4A-204ENST00000530996 ATG3Q9NT62 314 aa21.66■■□□□ 1.06
CHMP4A-204ENST00000530996 PLEKHO1Q53GL0 409 aaPredicted RBP21.65■■□□□ 1.06
CHMP4A-204ENST00000530996 ATP10DQ9P241 1426 aa21.64■■□□□ 1.06
CHMP4A-204ENST00000530996 KDRP35968 1356 aa21.64■■□□□ 1.06
CHMP4A-204ENST00000530996 DCAF5Q96JK2 942 aa21.64■■□□□ 1.05
CHMP4A-204ENST00000530996 C1orf141Q5JVX7 400 aa21.63■■□□□ 1.05
CHMP4A-204ENST00000530996 CABP4P57796 275 aa21.62■■□□□ 1.05
CHMP4A-204ENST00000530996 RTCBQ9Y3I0 505 aaKnown RBP21.62■■□□□ 1.05
CHMP4A-204ENST00000530996 KNSTRNQ9Y448 316 aa21.62■■□□□ 1.05
CHMP4A-204ENST00000530996 ERVV-2B6SEH9 535 aa21.61■■□□□ 1.05
CHMP4A-204ENST00000530996 MMP10P09238 476 aa21.61■■□□□ 1.05
CHMP4A-204ENST00000530996 AMOTQ4VCS5 1084 aa21.61■■□□□ 1.05
CHMP4A-204ENST00000530996 KDM6AO15550 1401 aaPredicted RBP21.61■■□□□ 1.05
CHMP4A-204ENST00000530996 AEBP1Q8IUX7 1158 aa21.6■■□□□ 1.05
CHMP4A-204ENST00000530996 ZNF526Q8TF50 670 aaPredicted RBP21.6■■□□□ 1.05
CHMP4A-204ENST00000530996 MTHFSP49914 203 aa21.58■■□□□ 1.05
CHMP4A-204ENST00000530996 TRAPPC3LQ5T215 181 aa21.58■■□□□ 1.05
CHMP4A-204ENST00000530996 GPBP1L1Q9HC44 474 aaPredicted RBP21.58■■□□□ 1.05
CHMP4A-204ENST00000530996 CICQ96RK0 1608 aaPredicted RBP21.58■■□□□ 1.04
CHMP4A-204ENST00000530996 SULT6B1Q6IMI4 303 aa21.57■■□□□ 1.04
CHMP4A-204ENST00000530996 PTCD1O75127 700 aaKnown RBP21.56■■□□□ 1.04
CHMP4A-204ENST00000530996 CNTNAP4Q9C0A0 1308 aa21.55■■□□□ 1.04
CHMP4A-204ENST00000530996 RFC4P35249 363 aa21.55■■□□□ 1.04
CHMP4A-204ENST00000530996 SLC4A9Q96Q91 983 aa21.55■■□□□ 1.04
CHMP4A-204ENST00000530996 PXDNLA1KZ92 1463 aa21.54■■□□□ 1.04
CHMP4A-204ENST00000530996 ADCY9O60503 1353 aa21.54■■□□□ 1.04
CHMP4A-204ENST00000530996 ADRA2BP18089 450 aa21.54■■□□□ 1.04
CHMP4A-204ENST00000530996 NLGN1Q8N2Q7 840 aa21.53■■□□□ 1.04
CHMP4A-204ENST00000530996 RC3H1Q5TC82 1133 aaKnown RBP21.52■■□□□ 1.04
CHMP4A-204ENST00000530996 ARHGEF1Q92888 912 aaKnown RBP21.52■■□□□ 1.04
CHMP4A-204ENST00000530996 CCDC87Q9NVE4 849 aa21.52■■□□□ 1.04
CHMP4A-204ENST00000530996 C10orf71Q711Q0 1435 aa21.52■■□□□ 1.04
CHMP4A-204ENST00000530996 ZNF831Q5JPB2 1677 aa21.51■■□□□ 1.03
CHMP4A-204ENST00000530996 BCS1LQ9Y276 419 aa21.51■■□□□ 1.03
CHMP4A-204ENST00000530996 PARP3Q9Y6F1 533 aa21.51■■□□□ 1.03
CHMP4A-204ENST00000530996 COL5A3P25940 1745 aaPredicted RBP21.5■■□□□ 1.03
CHMP4A-204ENST00000530996 RPS6KA4O75676 772 aa21.5■■□□□ 1.03
CHMP4A-204ENST00000530996 CRKLP46109 303 aaKnown RBP21.5■■□□□ 1.03
CHMP4A-204ENST00000530996 NFATC2IPQ8NCF5 419 aa21.5■■□□□ 1.03
CHMP4A-204ENST00000530996 GYS1P13807 737 aa21.49■■□□□ 1.03
CHMP4A-204ENST00000530996 IL13P35225 146 aa21.49■■□□□ 1.03
CHMP4A-204ENST00000530996 C4AP0C0L4 1744 aa21.48■■□□□ 1.03
CHMP4A-204ENST00000530996 KIF7Q2M1P5 1343 aa21.48■■□□□ 1.03
CHMP4A-204ENST00000530996 A0A0G2JLW4 131 aa21.47■■□□□ 1.03
CHMP4A-204ENST00000530996 TGFB2P61812 414 aa21.47■■□□□ 1.03
CHMP4A-204ENST00000530996 HMOX1P09601 288 aa21.46■■□□□ 1.03
CHMP4A-204ENST00000530996 AKAP4Q5JQC9 854 aa21.46■■□□□ 1.03
CHMP4A-204ENST00000530996 AMER1Q5JTC6 1135 aaPredicted RBP21.46■■□□□ 1.03
CHMP4A-204ENST00000530996 SRP68Q9UHB9 627 aaKnown RBP21.45■■□□□ 1.02
CHMP4A-204ENST00000530996 FCHSD2O94868 740 aa21.44■■□□□ 1.02
CHMP4A-204ENST00000530996 DPEP1P16444 411 aa21.44■■□□□ 1.02
CHMP4A-204ENST00000530996 CNGB1Q14028 1251 aaPredicted RBP21.44■■□□□ 1.02
CHMP4A-204ENST00000530996 CC2D1BQ5T0F9 858 aaKnown RBP21.44■■□□□ 1.02
CHMP4A-204ENST00000530996 TJP1Q07157 1748 aa21.43■■□□□ 1.02
CHMP4A-204ENST00000530996 ARHGAP27Q6ZUM4 889 aa21.43■■□□□ 1.02
CHMP4A-204ENST00000530996 SLC52A2Q9HAB3 445 aa21.43■■□□□ 1.02
CHMP4A-204ENST00000530996 USP42Q9H9J4 1324 aaKnown RBP21.43■■□□□ 1.02
CHMP4A-204ENST00000530996 N4BP2Q86UW6 1770 aaPredicted RBP21.42■■□□□ 1.02
CHMP4A-204ENST00000530996 KIF13BQ9NQT8 1826 aa21.42■■□□□ 1.02
CHMP4A-204ENST00000530996 KIAA1551Q9HCM1 1747 aa21.41■■□□□ 1.02
CHMP4A-204ENST00000530996 MRC1P22897 1456 aa21.41■■□□□ 1.02
CHMP4A-204ENST00000530996 FKBP8Q14318 412 aa21.41■■□□□ 1.02
CHMP4A-204ENST00000530996 DNAJC10Q8IXB1 793 aa21.41■■□□□ 1.02
CHMP4A-204ENST00000530996 DIAPH1O60610 1272 aaKnown RBP21.4■■□□□ 1.02
CHMP4A-204ENST00000530996 ZPR1O75312 459 aa21.4■■□□□ 1.02
CHMP4A-204ENST00000530996 SCN11AQ9UI33 1791 aa21.39■■□□□ 1.01
CHMP4A-204ENST00000530996 RNMTO43148 476 aaKnown RBP21.39■■□□□ 1.01
CHMP4A-204ENST00000530996 SLC39A6Q13433 755 aa21.39■■□□□ 1.01
CHMP4A-204ENST00000530996 LGR6Q9HBX8 967 aa21.39■■□□□ 1.01
CHMP4A-204ENST00000530996 DDR1Q08345 913 aa21.38■■□□□ 1.01
CHMP4A-204ENST00000530996 HSPA6P17066 643 aa21.37■■□□□ 1.01
CHMP4A-204ENST00000530996 INTS5Q6P9B9 1019 aaKnown RBP21.37■■□□□ 1.01
CHMP4A-204ENST00000530996 MYH14Q7Z406 1995 aaKnown RBP21.37■■□□□ 1.01
CHMP4A-204ENST00000530996 COL15A1P39059 1388 aa21.36■■□□□ 1.01
CHMP4A-204ENST00000530996 U2SURPO15042 1029 aaKnown RBP21.36■■□□□ 1.01
CHMP4A-204ENST00000530996 MTHFSDQ2M296 383 aaKnown RBP21.36■■□□□ 1.01
CHMP4A-204ENST00000530996 USPL1Q5W0Q7 1092 aa21.36■■□□□ 1.01
CHMP4A-204ENST00000530996 PIM2Q9P1W9 311 aa21.36■■□□□ 1.01
CHMP4A-204ENST00000530996 CEP350Q5VT06 3117 aa21.36■■□□□ 1.01
CHMP4A-204ENST00000530996 KCPQ6ZWJ8 1503 aa21.35■■□□□ 1.01
CHMP4A-204ENST00000530996 SOS1Q07889 1333 aaPredicted RBP21.35■■□□□ 1.01
CHMP4A-204ENST00000530996 DALRD3Q5D0E6 543 aaKnown RBP21.35■■□□□ 1.01
CHMP4A-204ENST00000530996 TTC5Q8N0Z6 440 aa21.35■■□□□ 1.01
CHMP4A-204ENST00000530996 KIF3CO14782 793 aa21.34■■□□□ 1.01
CHMP4A-204ENST00000530996 POLRMTO00411 1230 aaKnown RBP21.33■■□□□ 1.01
CHMP4A-204ENST00000530996 CYP19A1P11511 503 aaPredicted RBP21.33■■□□□ 1.01
CHMP4A-204ENST00000530996 CHRNA5P30532 468 aa21.33■■□□□ 1.01
CHMP4A-204ENST00000530996 C9orf131Q5VYM1 1079 aa21.33■■□□□ 1.01
CHMP4A-204ENST00000530996 ZBTB1Q9Y2K1 713 aa21.33■■□□□ 1.01
CHMP4A-204ENST00000530996 KCNA3P22001 575 aa21.31■■□□□ 1
CHMP4A-204ENST00000530996 TEFQ10587 303 aa21.3■■□□□ 1
CHMP4A-204ENST00000530996 RNF181Q9P0P0 153 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms