RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 ERVV-2B6SEH9 535 aa20.56■□□□□ 0.88
CAPN1-219ENST00000530495 ZNF831Q5JPB2 1677 aa20.55■□□□□ 0.88
CAPN1-219ENST00000530495 ADCY9O60503 1353 aa20.55■□□□□ 0.88
CAPN1-219ENST00000530495 HSP90AB1P08238 724 aaKnown RBP20.54■□□□□ 0.88
CAPN1-219ENST00000530495 DCAF5Q96JK2 942 aa20.54■□□□□ 0.88
CAPN1-219ENST00000530495 GPBP1L1Q9HC44 474 aaPredicted RBP20.54■□□□□ 0.88
CAPN1-219ENST00000530495 TRAPPC3LQ5T215 181 aa20.53■□□□□ 0.88
CAPN1-219ENST00000530495 SLC4A9Q96Q91 983 aa20.53■□□□□ 0.88
CAPN1-219ENST00000530495 PANK3Q9H999 370 aa20.53■□□□□ 0.88
CAPN1-219ENST00000530495 KDRP35968 1356 aa20.53■□□□□ 0.88
CAPN1-219ENST00000530495 MMP10P09238 476 aa20.52■□□□□ 0.88
CAPN1-219ENST00000530495 PLEKHO1Q53GL0 409 aaPredicted RBP20.52■□□□□ 0.88
CAPN1-219ENST00000530495 RC3H1Q5TC82 1133 aaKnown RBP20.52■□□□□ 0.88
CAPN1-219ENST00000530495 RTCBQ9Y3I0 505 aaKnown RBP20.52■□□□□ 0.88
CAPN1-219ENST00000530495 KIF13BQ9NQT8 1826 aa20.51■□□□□ 0.87
CAPN1-219ENST00000530495 EIF4G2P78344 907 aaKnown RBP eCLIP20.51■□□□□ 0.87
CAPN1-219ENST00000530495 AMOTQ4VCS5 1084 aa20.51■□□□□ 0.87
CAPN1-219ENST00000530495 NLGN1Q8N2Q7 840 aa20.51■□□□□ 0.87
CAPN1-219ENST00000530495 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
CAPN1-219ENST00000530495 WWC3Q9ULE0 1092 aa20.51■□□□□ 0.87
CAPN1-219ENST00000530495 ADRA2BP18089 450 aa20.5■□□□□ 0.87
CAPN1-219ENST00000530495 PCGF6Q9BYE7 350 aa20.5■□□□□ 0.87
CAPN1-219ENST00000530495 HSPA5P11021 654 aaKnown RBP20.49■□□□□ 0.87
CAPN1-219ENST00000530495 TGFB2P61812 414 aa20.49■□□□□ 0.87
CAPN1-219ENST00000530495 ARHGEF1Q92888 912 aaKnown RBP20.49■□□□□ 0.87
CAPN1-219ENST00000530495 COL5A3P25940 1745 aaPredicted RBP20.49■□□□□ 0.87
CAPN1-219ENST00000530495 RPS6KA4O75676 772 aa20.48■□□□□ 0.87
CAPN1-219ENST00000530495 CABP4P57796 275 aa20.48■□□□□ 0.87
CAPN1-219ENST00000530495 ZNF530Q6P9A1 599 aaPredicted RBP20.48■□□□□ 0.87
CAPN1-219ENST00000530495 ZNF526Q8TF50 670 aaPredicted RBP20.48■□□□□ 0.87
CAPN1-219ENST00000530495 CNTNAP4Q9C0A0 1308 aa20.48■□□□□ 0.87
CAPN1-219ENST00000530495 KDM6AO15550 1401 aaPredicted RBP20.47■□□□□ 0.87
CAPN1-219ENST00000530495 KIAA1551Q9HCM1 1747 aa20.47■□□□□ 0.87
CAPN1-219ENST00000530495 PXDNLA1KZ92 1463 aa20.46■□□□□ 0.87
CAPN1-219ENST00000530495 MTHFSP49914 203 aa20.46■□□□□ 0.87
CAPN1-219ENST00000530495 N4BP2Q86UW6 1770 aaPredicted RBP20.46■□□□□ 0.87
CAPN1-219ENST00000530495 CICQ96RK0 1608 aaPredicted RBP20.45■□□□□ 0.87
CAPN1-219ENST00000530495 MYH14Q7Z406 1995 aaKnown RBP20.45■□□□□ 0.86
CAPN1-219ENST00000530495 GYS1P13807 737 aa20.45■□□□□ 0.86
CAPN1-219ENST00000530495 RFC4P35249 363 aa20.45■□□□□ 0.86
CAPN1-219ENST00000530495 MORC1Q86VD1 984 aa20.45■□□□□ 0.86
CAPN1-219ENST00000530495 A0A0G2JLW4 131 aa20.44■□□□□ 0.86
CAPN1-219ENST00000530495 C1orf141Q5JVX7 400 aa20.44■□□□□ 0.86
CAPN1-219ENST00000530495 AEBP1Q8IUX7 1158 aa20.44■□□□□ 0.86
CAPN1-219ENST00000530495 NFATC2IPQ8NCF5 419 aa20.44■□□□□ 0.86
CAPN1-219ENST00000530495 CEP350Q5VT06 3117 aa20.44■□□□□ 0.86
CAPN1-219ENST00000530495 C10orf71Q711Q0 1435 aa20.43■□□□□ 0.86
CAPN1-219ENST00000530495 C4AP0C0L4 1744 aa20.42■□□□□ 0.86
CAPN1-219ENST00000530495 PTCD1O75127 700 aaKnown RBP20.42■□□□□ 0.86
CAPN1-219ENST00000530495 HSPA6P17066 643 aa20.42■□□□□ 0.86
CAPN1-219ENST00000530495 CCDC87Q9NVE4 849 aa20.42■□□□□ 0.86
CAPN1-219ENST00000530495 KIF3CO14782 793 aa20.41■□□□□ 0.86
CAPN1-219ENST00000530495 SULT6B1Q6IMI4 303 aa20.41■□□□□ 0.86
CAPN1-219ENST00000530495 BCS1LQ9Y276 419 aa20.41■□□□□ 0.86
CAPN1-219ENST00000530495 PARP3Q9Y6F1 533 aa20.41■□□□□ 0.86
CAPN1-219ENST00000530495 DPEP1P16444 411 aa20.4■□□□□ 0.86
CAPN1-219ENST00000530495 IL13P35225 146 aa20.4■□□□□ 0.86
CAPN1-219ENST00000530495 CRKLP46109 303 aaKnown RBP20.39■□□□□ 0.85
CAPN1-219ENST00000530495 KNSTRNQ9Y448 316 aa20.39■□□□□ 0.85
CAPN1-219ENST00000530495 BRCA1P38398 1863 aaKnown RBP20.39■□□□□ 0.85
CAPN1-219ENST00000530495 SCN11AQ9UI33 1791 aa20.39■□□□□ 0.85
CAPN1-219ENST00000530495 KCNA3P22001 575 aa20.38■□□□□ 0.85
CAPN1-219ENST00000530495 ARHGAP27Q6ZUM4 889 aa20.38■□□□□ 0.85
CAPN1-219ENST00000530495 TJP1Q07157 1748 aa20.36■□□□□ 0.85
CAPN1-219ENST00000530495 USP42Q9H9J4 1324 aaKnown RBP20.35■□□□□ 0.85
CAPN1-219ENST00000530495 FCHSD2O94868 740 aa20.35■□□□□ 0.85
CAPN1-219ENST00000530495 FKBP8Q14318 412 aa20.35■□□□□ 0.85
CAPN1-219ENST00000530495 AKAP4Q5JQC9 854 aa20.35■□□□□ 0.85
CAPN1-219ENST00000530495 INTS5Q6P9B9 1019 aaKnown RBP20.35■□□□□ 0.85
CAPN1-219ENST00000530495 SRP68Q9UHB9 627 aaKnown RBP20.35■□□□□ 0.85
CAPN1-219ENST00000530495 AMER1Q5JTC6 1135 aaPredicted RBP20.34■□□□□ 0.85
CAPN1-219ENST00000530495 IFFO2Q5TF58 517 aa20.34■□□□□ 0.85
CAPN1-219ENST00000530495 PIM2Q9P1W9 311 aa20.34■□□□□ 0.85
CAPN1-219ENST00000530495 ARFGEF1Q9Y6D6 1849 aa20.34■□□□□ 0.85
CAPN1-219ENST00000530495 SLC52A2Q9HAB3 445 aa20.33■□□□□ 0.85
CAPN1-219ENST00000530495 TOMM70O94826 608 aa20.32■□□□□ 0.84
CAPN1-219ENST00000530495 TM4SF1P30408 202 aa20.32■□□□□ 0.84
CAPN1-219ENST00000530495 DDR1Q08345 913 aa20.32■□□□□ 0.84
CAPN1-219ENST00000530495 LGR6Q9HBX8 967 aa20.32■□□□□ 0.84
CAPN1-219ENST00000530495 ADAMTS7Q9UKP4 1686 aa20.32■□□□□ 0.84
CAPN1-219ENST00000530495 DNAJC10Q8IXB1 793 aa20.3■□□□□ 0.84
CAPN1-219ENST00000530495 POLRMTO00411 1230 aaKnown RBP20.29■□□□□ 0.84
CAPN1-219ENST00000530495 RNMTO43148 476 aaKnown RBP20.29■□□□□ 0.84
CAPN1-219ENST00000530495 DALRD3Q5D0E6 543 aaKnown RBP20.29■□□□□ 0.84
CAPN1-219ENST00000530495 CCER1Q8TC90 406 aaPredicted RBP20.29■□□□□ 0.84
CAPN1-219ENST00000530495 VIRMAQ69YN4 1812 aaKnown RBP20.29■□□□□ 0.84
CAPN1-219ENST00000530495 ZPR1O75312 459 aa20.28■□□□□ 0.84
CAPN1-219ENST00000530495 CYP19A1P11511 503 aaPredicted RBP20.28■□□□□ 0.84
CAPN1-219ENST00000530495 APLP1P51693 650 aa20.28■□□□□ 0.84
CAPN1-219ENST00000530495 C9orf131Q5VYM1 1079 aa20.28■□□□□ 0.84
CAPN1-219ENST00000530495 NMRK2Q9NPI5 230 aa20.28■□□□□ 0.84
CAPN1-219ENST00000530495 SOS1Q07889 1333 aaPredicted RBP20.27■□□□□ 0.84
CAPN1-219ENST00000530495 MRC1P22897 1456 aa20.27■□□□□ 0.84
CAPN1-219ENST00000530495 HMOX1P09601 288 aa20.27■□□□□ 0.84
CAPN1-219ENST00000530495 SLC39A6Q13433 755 aa20.27■□□□□ 0.84
CAPN1-219ENST00000530495 USPL1Q5W0Q7 1092 aa20.27■□□□□ 0.84
CAPN1-219ENST00000530495 PER1O15534 1290 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-219ENST00000530495 CHRNA5P30532 468 aa20.26■□□□□ 0.83
CAPN1-219ENST00000530495 MTHFSDQ2M296 383 aaKnown RBP20.26■□□□□ 0.83
CAPN1-219ENST00000530495 KIF7Q2M1P5 1343 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms