RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TOM1L2Q6ZVM7 507 aa14.83□□□□□ -0.04
SCN3B-206ENST00000530277 NECAB1Q8N987 351 aa14.83□□□□□ -0.04
SCN3B-206ENST00000530277 MTMR7Q9Y216 660 aa14.83□□□□□ -0.04
SCN3B-206ENST00000530277 MAP3K2Q9Y2U5 619 aa14.83□□□□□ -0.04
SCN3B-206ENST00000530277 CYP46A1Q9Y6A2 500 aa14.83□□□□□ -0.04
SCN3B-206ENST00000530277 CDC42BPAQ5VT25 1732 aa14.83□□□□□ -0.04
SCN3B-206ENST00000530277 GOLGA6L19H0YKK7 550 aa14.83□□□□□ -0.04
SCN3B-206ENST00000530277 CD2BP2O95400 341 aaKnown RBP14.83□□□□□ -0.04
SCN3B-206ENST00000530277 TFIP11Q9UBB9 837 aaKnown RBP14.83□□□□□ -0.04
SCN3B-206ENST00000530277 CIZ1Q9ULV3 898 aaPredicted RBP14.83□□□□□ -0.04
SCN3B-206ENST00000530277 NPC1L1Q9UHC9 1359 aa14.82□□□□□ -0.04
SCN3B-206ENST00000530277 TMX3Q96JJ7 454 aa14.82□□□□□ -0.04
SCN3B-206ENST00000530277 CABP4P57796 275 aa14.82□□□□□ -0.04
SCN3B-206ENST00000530277 GUCY1B3Q02153 619 aa14.82□□□□□ -0.04
SCN3B-206ENST00000530277 CSPP1Q1MSJ5 1256 aa14.82□□□□□ -0.04
SCN3B-206ENST00000530277 RAB11FIP4Q86YS3 637 aa14.82□□□□□ -0.04
SCN3B-206ENST00000530277 DCTPP1Q9H773 170 aa14.82□□□□□ -0.04
SCN3B-206ENST00000530277 TATP17735 454 aaPredicted RBP14.82□□□□□ -0.04
SCN3B-206ENST00000530277 KIF1BPQ96EK5 621 aa14.82□□□□□ -0.04
SCN3B-206ENST00000530277 PLEKHF1Q96S99 279 aa14.82□□□□□ -0.04
SCN3B-206ENST00000530277 PDRG1Q9NUG6 133 aa14.82□□□□□ -0.04
SCN3B-206ENST00000530277 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.82□□□□□ -0.04
SCN3B-206ENST00000530277 PNMA6EA0A0J9YXQ4 647 aa14.81□□□□□ -0.04
SCN3B-206ENST00000530277 PKP1Q13835 747 aa14.81□□□□□ -0.04
SCN3B-206ENST00000530277 LRRC2Q9BYS8 371 aa14.81□□□□□ -0.04
SCN3B-206ENST00000530277 TSPY26PQ9H489 355 aa14.81□□□□□ -0.04
SCN3B-206ENST00000530277 MSH6P52701 1360 aa14.81□□□□□ -0.04
SCN3B-206ENST00000530277 ABCC1P33527 1531 aa14.81□□□□□ -0.04
SCN3B-206ENST00000530277 KLHDC4Q8TBB5 520 aa14.81□□□□□ -0.04
SCN3B-206ENST00000530277 PODXL2Q9NZ53 605 aa14.81□□□□□ -0.04
SCN3B-206ENST00000530277 ARHGAP45Q92619 1136 aa14.8□□□□□ -0.04
SCN3B-206ENST00000530277 INSRP06213 1382 aa14.8□□□□□ -0.04
SCN3B-206ENST00000530277 GOLGA6L6A8MZA4 724 aa14.8□□□□□ -0.04
SCN3B-206ENST00000530277 HTATSF1O43719 755 aaKnown RBP14.8□□□□□ -0.04
SCN3B-206ENST00000530277 LGR6Q9HBX8 967 aa14.8□□□□□ -0.04
SCN3B-206ENST00000530277 CWC22Q9HCG8 908 aaKnown RBP14.8□□□□□ -0.04
SCN3B-206ENST00000530277 PRDM11Q9NQV5 511 aa14.8□□□□□ -0.04
SCN3B-206ENST00000530277 SNRKQ9NRH2 765 aa14.8□□□□□ -0.04
SCN3B-206ENST00000530277 BLOC1S2Q6QNY1 142 aa14.79□□□□□ -0.04
SCN3B-206ENST00000530277 RHPN1Q8TCX5 695 aa14.79□□□□□ -0.04
SCN3B-206ENST00000530277 ZBTB3Q9H5J0 574 aa14.79□□□□□ -0.04
SCN3B-206ENST00000530277 ARHGEF5Q12774 1597 aa14.79□□□□□ -0.04
SCN3B-206ENST00000530277 MBD3O95983 291 aa14.79□□□□□ -0.04
SCN3B-206ENST00000530277 UBE3BQ7Z3V4 1068 aa14.79□□□□□ -0.04
SCN3B-206ENST00000530277 ZNF830Q96NB3 372 aaPredicted RBP14.79□□□□□ -0.04
SCN3B-206ENST00000530277 NDUFB9Q9Y6M9 179 aa14.79□□□□□ -0.04
SCN3B-206ENST00000530277 RAB11FIP3O75154 756 aa14.79□□□□□ -0.04
SCN3B-206ENST00000530277 GSPT1P15170 499 aaKnown RBP14.79□□□□□ -0.04
SCN3B-206ENST00000530277 LTKP29376 864 aa14.79□□□□□ -0.04
SCN3B-206ENST00000530277 RRP12Q5JTH9 1297 aaKnown RBP14.78□□□□□ -0.04
SCN3B-206ENST00000530277 SDF4Q9BRK5 362 aa14.78□□□□□ -0.04
SCN3B-206ENST00000530277 TRIM5Q9C035 493 aa14.78□□□□□ -0.04
SCN3B-206ENST00000530277 USP25Q9UHP3 1055 aa14.78□□□□□ -0.04
SCN3B-206ENST00000530277 PTPRCP08575 1304 aa14.78□□□□□ -0.04
SCN3B-206ENST00000530277 WDR33Q9C0J8 1336 aaKnown RBP14.78□□□□□ -0.04
SCN3B-206ENST00000530277 NFXL1Q6ZNB6 911 aa14.78□□□□□ -0.04
SCN3B-206ENST00000530277 CKAP2LQ8IYA6 745 aa14.78□□□□□ -0.04
SCN3B-206ENST00000530277 DDX17Q92841 729 aaKnown RBP14.78□□□□□ -0.04
SCN3B-206ENST00000530277 RRAGDQ9NQL2 400 aaPredicted RBP14.78□□□□□ -0.04
SCN3B-206ENST00000530277 TNRQ92752 1358 aa14.78□□□□□ -0.04
SCN3B-206ENST00000530277 KCNQ3O43525 872 aa14.77□□□□□ -0.04
SCN3B-206ENST00000530277 NRDCO43847 1150 aa14.77□□□□□ -0.04
SCN3B-206ENST00000530277 MCM2P49736 904 aa14.77□□□□□ -0.04
SCN3B-206ENST00000530277 CCDC173Q0VFZ6 552 aa14.77□□□□□ -0.04
SCN3B-206ENST00000530277 SASS6Q6UVJ0 657 aa14.77□□□□□ -0.04
SCN3B-206ENST00000530277 UHRF1BP1LA0JNW5 1464 aa14.77□□□□□ -0.05
SCN3B-206ENST00000530277 PRDM15P57071 1507 aaPredicted RBP14.76□□□□□ -0.05
SCN3B-206ENST00000530277 ZMYM3Q14202 1370 aa14.76□□□□□ -0.05
SCN3B-206ENST00000530277 PES1O00541 588 aaKnown RBP14.76□□□□□ -0.05
SCN3B-206ENST00000530277 NBPF7P0C2Y1 421 aaPredicted RBP14.76□□□□□ -0.05
SCN3B-206ENST00000530277 RALYLQ86SE5 291 aaKnown RBP14.76□□□□□ -0.05
SCN3B-206ENST00000530277 ESYT1Q9BSJ8 1104 aa14.76□□□□□ -0.05
SCN3B-206ENST00000530277 GLRX3O76003 335 aaKnown RBP14.75□□□□□ -0.05
SCN3B-206ENST00000530277 PRIM1P49642 420 aaKnown RBP14.75□□□□□ -0.05
SCN3B-206ENST00000530277 SIRT2Q8IXJ6 389 aa14.75□□□□□ -0.05
SCN3B-206ENST00000530277 RASSF8Q8NHQ8 419 aa14.75□□□□□ -0.05
SCN3B-206ENST00000530277 USP26Q9BXU7 913 aa14.75□□□□□ -0.05
SCN3B-206ENST00000530277 A0A087WZG4 1122 aa14.75□□□□□ -0.05
SCN3B-206ENST00000530277 DDX46Q7L014 1031 aaKnown RBP14.75□□□□□ -0.05
SCN3B-206ENST00000530277 ANKRD24Q8TF21 1146 aa14.75□□□□□ -0.05
SCN3B-206ENST00000530277 DBF4Q9UBU7 674 aaPredicted RBP14.75□□□□□ -0.05
SCN3B-206ENST00000530277 USP19O94966 1318 aa14.75□□□□□ -0.05
SCN3B-206ENST00000530277 CCT2P78371 535 aaKnown RBP14.75□□□□□ -0.05
SCN3B-206ENST00000530277 ZSCAN23Q3MJ62 389 aa14.75□□□□□ -0.05
SCN3B-206ENST00000530277 CCAR2Q8N163 923 aaKnown RBP14.75□□□□□ -0.05
SCN3B-206ENST00000530277 ORAI2Q96SN7 254 aa14.75□□□□□ -0.05
SCN3B-206ENST00000530277 METP08581 1390 aa14.74□□□□□ -0.05
SCN3B-206ENST00000530277 POGZQ7Z3K3 1410 aa14.74□□□□□ -0.05
SCN3B-206ENST00000530277 FAM173BQ6P4H8 233 aa14.74□□□□□ -0.05
SCN3B-206ENST00000530277 CCDC82Q8N4S0 544 aa14.74□□□□□ -0.05
SCN3B-206ENST00000530277 GPTP24298 496 aa14.74□□□□□ -0.05
SCN3B-206ENST00000530277 PSMA5P28066 241 aa14.74□□□□□ -0.05
SCN3B-206ENST00000530277 TRDNQ13061 729 aa14.74□□□□□ -0.05
SCN3B-206ENST00000530277 CHL1O00533 1208 aa14.74□□□□□ -0.05
SCN3B-206ENST00000530277 HCLS1P14317 486 aaPredicted RBP14.74□□□□□ -0.05
SCN3B-206ENST00000530277 HAND2P61296 217 aa14.74□□□□□ -0.05
SCN3B-206ENST00000530277 GIMAP6Q6P9H5 292 aa14.74□□□□□ -0.05
SCN3B-206ENST00000530277 MYO5CQ9NQX4 1742 aa14.73□□□□□ -0.05
SCN3B-206ENST00000530277 CCDC73Q6ZRK6 1079 aa14.73□□□□□ -0.05
SCN3B-206ENST00000530277 COPS6Q7L5N1 327 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms