RNA–Protein interactions for RNA: ENST00000530120.5

CSRP1-213, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 4

Gene CSRP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-213ENST00000530120 CAPN15O75808 1086 aa16.52■□□□□ 0.24
CSRP1-213ENST00000530120 MMP10P09238 476 aa16.52■□□□□ 0.24
CSRP1-213ENST00000530120 SIK1P57059 783 aa16.52■□□□□ 0.24
CSRP1-213ENST00000530120 NMRK2Q9NPI5 230 aa16.52■□□□□ 0.24
CSRP1-213ENST00000530120 CYP27B1O15528 508 aa16.51■□□□□ 0.23
CSRP1-213ENST00000530120 LINC00116Q8NCU8 138 aa16.51■□□□□ 0.23
CSRP1-213ENST00000530120 RBM46Q8TBY0 533 aaKnown RBP16.51■□□□□ 0.23
CSRP1-213ENST00000530120 PIGBQ92521 554 aa16.51■□□□□ 0.23
CSRP1-213ENST00000530120 EMILIN1Q9Y6C2 1016 aa16.51■□□□□ 0.23
CSRP1-213ENST00000530120 KIAA1551Q9HCM1 1747 aa16.5■□□□□ 0.23
CSRP1-213ENST00000530120 TGFB2P61812 414 aa16.5■□□□□ 0.23
CSRP1-213ENST00000530120 EIF4G2P78344 907 aaKnown RBP eCLIP16.5■□□□□ 0.23
CSRP1-213ENST00000530120 KLRG1Q96E93 195 aa16.5■□□□□ 0.23
CSRP1-213ENST00000530120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.5■□□□□ 0.23
CSRP1-213ENST00000530120 FCHSD2O94868 740 aa16.49■□□□□ 0.23
CSRP1-213ENST00000530120 TMOD3Q9NYL9 352 aa16.49■□□□□ 0.23
CSRP1-213ENST00000530120 SPG7Q9UQ90 795 aa16.49■□□□□ 0.23
CSRP1-213ENST00000530120 A0A0G2JLW4 131 aa16.48■□□□□ 0.23
CSRP1-213ENST00000530120 ATP6V1AP38606 617 aa16.48■□□□□ 0.23
CSRP1-213ENST00000530120 COL13A1Q5TAT6 717 aaPredicted RBP16.48■□□□□ 0.23
CSRP1-213ENST00000530120 CCDC87Q9NVE4 849 aa16.48■□□□□ 0.23
CSRP1-213ENST00000530120 BRCA1P38398 1863 aaKnown RBP16.48■□□□□ 0.23
CSRP1-213ENST00000530120 PPM1GO15355 546 aaPredicted RBP16.47■□□□□ 0.23
CSRP1-213ENST00000530120 FSTL1Q12841 308 aa16.47■□□□□ 0.23
CSRP1-213ENST00000530120 NKX1-1Q15270 411 aaPredicted RBP16.47■□□□□ 0.23
CSRP1-213ENST00000530120 TNS4Q8IZW8 715 aa16.47■□□□□ 0.23
CSRP1-213ENST00000530120 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
CSRP1-213ENST00000530120 KDM2BQ8NHM5 1336 aa16.46■□□□□ 0.23
CSRP1-213ENST00000530120 C10orf71Q711Q0 1435 aa16.46■□□□□ 0.23
CSRP1-213ENST00000530120 HTRA3P83110 453 aa16.46■□□□□ 0.23
CSRP1-213ENST00000530120 NLGN1Q8N2Q7 840 aa16.46■□□□□ 0.23
CSRP1-213ENST00000530120 C4AP0C0L4 1744 aa16.45■□□□□ 0.22
CSRP1-213ENST00000530120 ITPK1Q13572 414 aa16.45■□□□□ 0.22
CSRP1-213ENST00000530120 TRAPPC3LQ5T215 181 aa16.45■□□□□ 0.22
CSRP1-213ENST00000530120 C9orf131Q5VYM1 1079 aa16.45■□□□□ 0.22
CSRP1-213ENST00000530120 JMYQ8N9B5 988 aa16.45■□□□□ 0.22
CSRP1-213ENST00000530120 POLKQ9UBT6 870 aa16.45■□□□□ 0.22
CSRP1-213ENST00000530120 RTCBQ9Y3I0 505 aaKnown RBP16.45■□□□□ 0.22
CSRP1-213ENST00000530120 TNRC6CQ9HCJ0 1690 aaKnown RBP16.44■□□□□ 0.22
CSRP1-213ENST00000530120 DPEP1P16444 411 aa16.44■□□□□ 0.22
CSRP1-213ENST00000530120 EYA1Q99502 592 aa16.44■□□□□ 0.22
CSRP1-213ENST00000530120 ASAP1Q9ULH1 1129 aa16.44■□□□□ 0.22
CSRP1-213ENST00000530120 PARP3Q9Y6F1 533 aa16.44■□□□□ 0.22
CSRP1-213ENST00000530120 PCNTO95613 3336 aa16.43■□□□□ 0.22
CSRP1-213ENST00000530120 KCPQ6ZWJ8 1503 aa16.42■□□□□ 0.22
CSRP1-213ENST00000530120 HSPA5P11021 654 aaKnown RBP16.42■□□□□ 0.22
CSRP1-213ENST00000530120 PRELPP51888 382 aa16.42■□□□□ 0.22
CSRP1-213ENST00000530120 IFNL2Q8IZJ0 200 aa16.42■□□□□ 0.22
CSRP1-213ENST00000530120 ADRA2BP18089 450 aa16.41■□□□□ 0.22
CSRP1-213ENST00000530120 RFC4P35249 363 aa16.41■□□□□ 0.22
CSRP1-213ENST00000530120 CCER1Q8TC90 406 aaPredicted RBP16.41■□□□□ 0.22
CSRP1-213ENST00000530120 POLR3GLQ9BT43 218 aa16.41■□□□□ 0.22
CSRP1-213ENST00000530120 RNF181Q9P0P0 153 aa16.41■□□□□ 0.22
CSRP1-213ENST00000530120 EIF4A2Q14240 407 aaKnown RBP16.4■□□□□ 0.22
CSRP1-213ENST00000530120 PIM2Q9P1W9 311 aa16.4■□□□□ 0.22
CSRP1-213ENST00000530120 HSP90AB1P08238 724 aaKnown RBP16.39■□□□□ 0.21
CSRP1-213ENST00000530120 PHKG2P15735 406 aa16.39■□□□□ 0.21
CSRP1-213ENST00000530120 DALRD3Q5D0E6 543 aaKnown RBP16.39■□□□□ 0.21
CSRP1-213ENST00000530120 SMC1BQ8NDV3 1235 aa16.39■□□□□ 0.21
CSRP1-213ENST00000530120 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
CSRP1-213ENST00000530120 PANK3Q9H999 370 aa16.39■□□□□ 0.21
CSRP1-213ENST00000530120 RRAGCQ9HB90 399 aa16.39■□□□□ 0.21
CSRP1-213ENST00000530120 ATG3Q9NT62 314 aa16.39■□□□□ 0.21
CSRP1-213ENST00000530120 ZNF831Q5JPB2 1677 aa16.39■□□□□ 0.21
CSRP1-213ENST00000530120 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
CSRP1-213ENST00000530120 SBF1O95248 1867 aa16.38■□□□□ 0.21
CSRP1-213ENST00000530120 ARHGEF1Q92888 912 aaKnown RBP16.38■□□□□ 0.21
CSRP1-213ENST00000530120 GYS1P13807 737 aa16.37■□□□□ 0.21
CSRP1-213ENST00000530120 DCAF5Q96JK2 942 aa16.37■□□□□ 0.21
CSRP1-213ENST00000530120 KDRP35968 1356 aa16.37■□□□□ 0.21
CSRP1-213ENST00000530120 TNNT2P45379 298 aaPredicted RBP16.36■□□□□ 0.21
CSRP1-213ENST00000530120 AMOTQ4VCS5 1084 aa16.36■□□□□ 0.21
CSRP1-213ENST00000530120 RC3H1Q5TC82 1133 aaKnown RBP16.36■□□□□ 0.21
CSRP1-213ENST00000530120 CNTNAP4Q9C0A0 1308 aa16.36■□□□□ 0.21
CSRP1-213ENST00000530120 ERVV-2B6SEH9 535 aa16.35■□□□□ 0.21
CSRP1-213ENST00000530120 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
CSRP1-213ENST00000530120 MORC1Q86VD1 984 aa16.35■□□□□ 0.21
CSRP1-213ENST00000530120 KNSTRNQ9Y448 316 aa16.35■□□□□ 0.21
CSRP1-213ENST00000530120 KCNA3P22001 575 aa16.34■□□□□ 0.21
CSRP1-213ENST00000530120 PLEKHO1Q53GL0 409 aaPredicted RBP16.34■□□□□ 0.21
CSRP1-213ENST00000530120 MYH14Q7Z406 1995 aaKnown RBP16.34■□□□□ 0.21
CSRP1-213ENST00000530120 HSPA1AP0DMV8 641 aaKnown RBP16.33■□□□□ 0.2
CSRP1-213ENST00000530120 HSPA1BP0DMV9 641 aaKnown RBP16.33■□□□□ 0.2
CSRP1-213ENST00000530120 ZC3H4Q9UPT8 1303 aaKnown RBP16.31■□□□□ 0.2
CSRP1-213ENST00000530120 SLC4A9Q96Q91 983 aa16.31■□□□□ 0.2
CSRP1-213ENST00000530120 KDM6AO15550 1401 aaPredicted RBP16.3■□□□□ 0.2
CSRP1-213ENST00000530120 CHRNA5P30532 468 aa16.3■□□□□ 0.2
CSRP1-213ENST00000530120 ZNF530Q6P9A1 599 aaPredicted RBP16.3■□□□□ 0.2
CSRP1-213ENST00000530120 CCDC88AQ3V6T2 1871 aa16.3■□□□□ 0.2
CSRP1-213ENST00000530120 TIAM2Q8IVF5 1701 aa16.29■□□□□ 0.2
CSRP1-213ENST00000530120 VEGFAP15692 232 aaPredicted RBP16.29■□□□□ 0.2
CSRP1-213ENST00000530120 CABP4P57796 275 aa16.29■□□□□ 0.2
CSRP1-213ENST00000530120 FKBP8Q14318 412 aa16.29■□□□□ 0.2
CSRP1-213ENST00000530120 C1orf141Q5JVX7 400 aa16.29■□□□□ 0.2
CSRP1-213ENST00000530120 KIF7Q2M1P5 1343 aa16.28■□□□□ 0.2
CSRP1-213ENST00000530120 DDR1Q08345 913 aa16.28■□□□□ 0.2
CSRP1-213ENST00000530120 AMER1Q5JTC6 1135 aaPredicted RBP16.28■□□□□ 0.2
CSRP1-213ENST00000530120 SRP68Q9UHB9 627 aaKnown RBP16.28■□□□□ 0.2
CSRP1-213ENST00000530120 USP42Q9H9J4 1324 aaKnown RBP16.27■□□□□ 0.2
CSRP1-213ENST00000530120 PTCD1O75127 700 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms