RNA–Protein interactions for RNA: ENST00000529871.1

CASP1-211, Transcript of caspase 1, humanhuman

TSL 1 (best)

Gene CASP1, Length 1,392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1-211ENST00000529871 FAM98CQ17RN3 349 aaKnown RBP11.5□□□□□ -0.57
CASP1-211ENST00000529871 PLCH1Q4KWH8 1693 aa11.5□□□□□ -0.57
CASP1-211ENST00000529871 TNS1Q9HBL0 1735 aaKnown RBP11.49□□□□□ -0.57
CASP1-211ENST00000529871 CT47B1P0C2W7 299 aaPredicted RBP11.49□□□□□ -0.57
CASP1-211ENST00000529871 CABP4P57796 275 aa11.49□□□□□ -0.57
CASP1-211ENST00000529871 MPRIPQ6WCQ1 1025 aa11.49□□□□□ -0.57
CASP1-211ENST00000529871 MCM10Q7L590 875 aa11.49□□□□□ -0.57
CASP1-211ENST00000529871 LAS1LQ9Y4W2 734 aaKnown RBP11.49□□□□□ -0.57
CASP1-211ENST00000529871 HMGB2P26583 209 aaKnown RBP11.48□□□□□ -0.57
CASP1-211ENST00000529871 IL17REQ8NFR9 667 aa11.48□□□□□ -0.57
CASP1-211ENST00000529871 MEGF6O75095 1541 aa11.47□□□□□ -0.57
CASP1-211ENST00000529871 CYP27B1O15528 508 aa11.47□□□□□ -0.57
CASP1-211ENST00000529871 BTBD11A6QL63 1104 aa11.46□□□□□ -0.57
CASP1-211ENST00000529871 CHL1O00533 1208 aa11.46□□□□□ -0.57
CASP1-211ENST00000529871 DCTN1Q14203 1278 aa11.46□□□□□ -0.57
CASP1-211ENST00000529871 ZNF428Q96B54 188 aa11.46□□□□□ -0.57
CASP1-211ENST00000529871 SLC52A2Q9HAB3 445 aa11.46□□□□□ -0.57
CASP1-211ENST00000529871 TSPYL4Q9UJ04 414 aa11.46□□□□□ -0.57
CASP1-211ENST00000529871 PARP4Q9UKK3 1724 aaKnown RBP11.46□□□□□ -0.57
CASP1-211ENST00000529871 SOS1Q07889 1333 aaPredicted RBP11.46□□□□□ -0.58
CASP1-211ENST00000529871 NRAPQ86VF7 1730 aa11.45□□□□□ -0.58
CASP1-211ENST00000529871 ZNF853P0CG23 659 aa11.45□□□□□ -0.58
CASP1-211ENST00000529871 EN1Q05925 392 aaPredicted RBP11.45□□□□□ -0.58
CASP1-211ENST00000529871 SEPT12Q8IYM1 358 aa11.45□□□□□ -0.58
CASP1-211ENST00000529871 TRMT2AQ8IZ69 625 aaKnown RBP11.45□□□□□ -0.58
CASP1-211ENST00000529871 TTC5Q8N0Z6 440 aa11.45□□□□□ -0.58
CASP1-211ENST00000529871 LGR6Q9HBX8 967 aa11.45□□□□□ -0.58
CASP1-211ENST00000529871 TMOD3Q9NYL9 352 aa11.45□□□□□ -0.58
CASP1-211ENST00000529871 RGPD2P0DJD1 1756 aa11.45□□□□□ -0.58
CASP1-211ENST00000529871 CEMIPQ8WUJ3 1361 aa11.44□□□□□ -0.58
CASP1-211ENST00000529871 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
CASP1-211ENST00000529871 RREB1Q92766 1687 aa11.44□□□□□ -0.58
CASP1-211ENST00000529871 DUSP27Q5VZP5 1158 aa11.43□□□□□ -0.58
CASP1-211ENST00000529871 NFATC2IPQ8NCF5 419 aa11.43□□□□□ -0.58
CASP1-211ENST00000529871 THUMPD2Q9BTF0 503 aaKnown RBP11.43□□□□□ -0.58
CASP1-211ENST00000529871 TNS2Q63HR2 1409 aa11.43□□□□□ -0.58
CASP1-211ENST00000529871 FAM196AQ6ZSG2 479 aa11.42□□□□□ -0.58
CASP1-211ENST00000529871 KRT27Q7Z3Y8 459 aa11.42□□□□□ -0.58
CASP1-211ENST00000529871 SMARCC1Q92922 1105 aaPredicted RBP11.42□□□□□ -0.58
CASP1-211ENST00000529871 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
CASP1-211ENST00000529871 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.41□□□□□ -0.58
CASP1-211ENST00000529871 MARCH10Q8NA82 808 aaPredicted RBP11.41□□□□□ -0.58
CASP1-211ENST00000529871 SYTL4Q96C24 671 aaPredicted RBP11.41□□□□□ -0.58
CASP1-211ENST00000529871 TEX13AQ9BXU3 409 aaPredicted RBP11.41□□□□□ -0.58
CASP1-211ENST00000529871 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
CASP1-211ENST00000529871 HOXB7P09629 217 aa11.41□□□□□ -0.58
CASP1-211ENST00000529871 POTEHQ6S545 545 aa11.41□□□□□ -0.58
CASP1-211ENST00000529871 FMNL2Q96PY5 1086 aa11.41□□□□□ -0.58
CASP1-211ENST00000529871 NUP188Q5SRE5 1749 aa11.4□□□□□ -0.58
CASP1-211ENST00000529871 PKD1L3Q7Z443 1732 aa11.4□□□□□ -0.58
CASP1-211ENST00000529871 PRIM1P49642 420 aaKnown RBP11.4□□□□□ -0.59
CASP1-211ENST00000529871 EXOSC9Q06265 439 aaKnown RBP11.4□□□□□ -0.59
CASP1-211ENST00000529871 TWISTNBQ3B726 338 aaPredicted RBP11.4□□□□□ -0.59
CASP1-211ENST00000529871 ZNF790Q6PG37 636 aa11.4□□□□□ -0.59
CASP1-211ENST00000529871 RCAN3Q9UKA8 241 aa11.4□□□□□ -0.59
CASP1-211ENST00000529871 ALDH1L2Q3SY69 923 aa11.39□□□□□ -0.59
CASP1-211ENST00000529871 TSR2Q969E8 191 aaKnown RBP11.39□□□□□ -0.59
CASP1-211ENST00000529871 CAMKK2Q96RR4 588 aa11.39□□□□□ -0.59
CASP1-211ENST00000529871 SPINK5Q9NQ38 1064 aaPredicted RBP11.39□□□□□ -0.59
CASP1-211ENST00000529871 MIS18AQ9NYP9 233 aa11.39□□□□□ -0.59
CASP1-211ENST00000529871 BCL9O00512 1426 aa11.38□□□□□ -0.59
CASP1-211ENST00000529871 IPO8O15397 1037 aaKnown RBP11.38□□□□□ -0.59
CASP1-211ENST00000529871 GIGYF1O75420 1035 aaPredicted RBP11.38□□□□□ -0.59
CASP1-211ENST00000529871 SNRPA1P09661 255 aaKnown RBP11.38□□□□□ -0.59
CASP1-211ENST00000529871 MS4A1P11836 297 aa11.38□□□□□ -0.59
CASP1-211ENST00000529871 CCDC30Q5VVM6 783 aa11.38□□□□□ -0.59
CASP1-211ENST00000529871 STK31Q9BXU1 1019 aa11.38□□□□□ -0.59
CASP1-211ENST00000529871 SPON1Q9HCB6 807 aa11.38□□□□□ -0.59
CASP1-211ENST00000529871 KDM6AO15550 1401 aaPredicted RBP11.37□□□□□ -0.59
CASP1-211ENST00000529871 EIF4A1P60842 406 aaKnown RBP11.37□□□□□ -0.59
CASP1-211ENST00000529871 EZH2Q15910 746 aaKnown RBP11.37□□□□□ -0.59
CASP1-211ENST00000529871 VSIG10Q8N0Z9 540 aa11.37□□□□□ -0.59
CASP1-211ENST00000529871 PIGBQ92521 554 aa11.37□□□□□ -0.59
CASP1-211ENST00000529871 PCDH10Q9P2E7 1040 aa11.37□□□□□ -0.59
CASP1-211ENST00000529871 DLG5Q8TDM6 1919 aa11.37□□□□□ -0.59
CASP1-211ENST00000529871 GOLGB1Q14789 3259 aaKnown RBP11.36□□□□□ -0.59
CASP1-211ENST00000529871 KCNQ2O43526 872 aa11.36□□□□□ -0.59
CASP1-211ENST00000529871 VAMP4O75379 141 aa11.36□□□□□ -0.59
CASP1-211ENST00000529871 NEFLP07196 543 aa11.36□□□□□ -0.59
CASP1-211ENST00000529871 BCL11BQ9C0K0 894 aaPredicted RBP11.36□□□□□ -0.59
CASP1-211ENST00000529871 PPP1R1BQ9UD71 204 aaPredicted RBP11.36□□□□□ -0.59
CASP1-211ENST00000529871 ELL2O00472 640 aaPredicted RBP11.35□□□□□ -0.59
CASP1-211ENST00000529871 STARD3NLO95772 234 aa11.35□□□□□ -0.59
CASP1-211ENST00000529871 CANXP27824 592 aaKnown RBP11.35□□□□□ -0.59
CASP1-211ENST00000529871 NPM2Q86SE8 214 aaKnown RBP11.35□□□□□ -0.59
CASP1-211ENST00000529871 C8orf58Q8NAV2 365 aa11.35□□□□□ -0.59
CASP1-211ENST00000529871 ACSBG1Q96GR2 724 aa11.35□□□□□ -0.59
CASP1-211ENST00000529871 SHANK3Q9BYB0 1731 aa11.34□□□□□ -0.59
CASP1-211ENST00000529871 SLC39A6Q13433 755 aa11.34□□□□□ -0.59
CASP1-211ENST00000529871 ATG3Q9NT62 314 aa11.34□□□□□ -0.59
CASP1-211ENST00000529871 THSD7AQ9UPZ6 1657 aa11.34□□□□□ -0.59
CASP1-211ENST00000529871 MRC1P22897 1456 aa11.33□□□□□ -0.6
CASP1-211ENST00000529871 RARSP54136 660 aaKnown RBP11.33□□□□□ -0.6
CASP1-211ENST00000529871 BRPF1P55201 1214 aaPredicted RBP11.33□□□□□ -0.6
CASP1-211ENST00000529871 HDGFL1Q5TGJ6 251 aa11.33□□□□□ -0.6
CASP1-211ENST00000529871 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
CASP1-211ENST00000529871 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
CASP1-211ENST00000529871 SMC4Q9NTJ3 1288 aa11.33□□□□□ -0.6
CASP1-211ENST00000529871 DBF4Q9UBU7 674 aaPredicted RBP11.33□□□□□ -0.6
CASP1-211ENST00000529871 WNK3Q9BYP7 1800 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms