RNA–Protein interactions for RNA: ENST00000529795.1

PACS1-210, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-210ENST00000529795 PDGFDQ9GZP0 370 aaPredicted RBP17.02■□□□□ 0.32
PACS1-210ENST00000529795 TUBGCP6Q96RT7 1819 aa17.01■□□□□ 0.31
PACS1-210ENST00000529795 COL3A1P02461 1466 aaPredicted RBP17.01■□□□□ 0.31
PACS1-210ENST00000529795 NEFMP07197 916 aa17.01■□□□□ 0.31
PACS1-210ENST00000529795 NFATC2IPQ8NCF5 419 aa17.01■□□□□ 0.31
PACS1-210ENST00000529795 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
PACS1-210ENST00000529795 C4BP0C0L5 1744 aa17■□□□□ 0.31
PACS1-210ENST00000529795 PTGER2P43116 358 aa17■□□□□ 0.31
PACS1-210ENST00000529795 ARXQ96QS3 562 aa17■□□□□ 0.31
PACS1-210ENST00000529795 RBM42Q9BTD8 480 aaKnown RBP17■□□□□ 0.31
PACS1-210ENST00000529795 KDM6AO15550 1401 aaPredicted RBP16.99■□□□□ 0.31
PACS1-210ENST00000529795 FCHSD2O94868 740 aa16.99■□□□□ 0.31
PACS1-210ENST00000529795 SSFA2P28290 1259 aa16.99■□□□□ 0.31
PACS1-210ENST00000529795 RALBP1Q15311 655 aa16.99■□□□□ 0.31
PACS1-210ENST00000529795 MTHFSDQ2M296 383 aaKnown RBP16.99■□□□□ 0.31
PACS1-210ENST00000529795 PNNQ9H307 717 aaKnown RBP16.99■□□□□ 0.31
PACS1-210ENST00000529795 SLC52A2Q9HAB3 445 aa16.99■□□□□ 0.31
PACS1-210ENST00000529795 GNAT3A8MTJ3 354 aa16.98■□□□□ 0.31
PACS1-210ENST00000529795 RNMTO43148 476 aaKnown RBP16.98■□□□□ 0.31
PACS1-210ENST00000529795 U2AF1L5P0DN76 240 aaPredicted RBP16.98■□□□□ 0.31
PACS1-210ENST00000529795 U2AF1Q01081 240 aaKnown RBP eCLIP16.98■□□□□ 0.31
PACS1-210ENST00000529795 RC3H1Q5TC82 1133 aaKnown RBP16.98■□□□□ 0.31
PACS1-210ENST00000529795 COL23A1Q86Y22 540 aaPredicted RBP16.97■□□□□ 0.31
PACS1-210ENST00000529795 SGIP1Q9BQI5 828 aa16.97■□□□□ 0.31
PACS1-210ENST00000529795 COL24A1Q17RW2 1714 aa16.96■□□□□ 0.31
PACS1-210ENST00000529795 TEFQ10587 303 aa16.96■□□□□ 0.31
PACS1-210ENST00000529795 UBR3Q6ZT12 1888 aa16.96■□□□□ 0.31
PACS1-210ENST00000529795 PRKAR2BP31323 418 aa16.95■□□□□ 0.3
PACS1-210ENST00000529795 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
PACS1-210ENST00000529795 RTCBQ9Y3I0 505 aaKnown RBP16.95■□□□□ 0.3
PACS1-210ENST00000529795 MAP3K5Q99683 1374 aa16.94■□□□□ 0.3
PACS1-210ENST00000529795 GNPATO15228 680 aa16.94■□□□□ 0.3
PACS1-210ENST00000529795 PTCD1O75127 700 aaKnown RBP16.94■□□□□ 0.3
PACS1-210ENST00000529795 ADRA2BP18089 450 aa16.94■□□□□ 0.3
PACS1-210ENST00000529795 LINC00116Q8NCU8 138 aa16.94■□□□□ 0.3
PACS1-210ENST00000529795 RSPH6AQ9H0K4 717 aa16.94■□□□□ 0.3
PACS1-210ENST00000529795 LGR6Q9HBX8 967 aa16.94■□□□□ 0.3
PACS1-210ENST00000529795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.93■□□□□ 0.3
PACS1-210ENST00000529795 ITPK1Q13572 414 aa16.93■□□□□ 0.3
PACS1-210ENST00000529795 TTC5Q8N0Z6 440 aa16.93■□□□□ 0.3
PACS1-210ENST00000529795 RTF1Q92541 710 aaKnown RBP16.93■□□□□ 0.3
PACS1-210ENST00000529795 SYT17Q9BSW7 474 aa16.93■□□□□ 0.3
PACS1-210ENST00000529795 FHDC1Q9C0D6 1143 aaPredicted RBP16.93■□□□□ 0.3
PACS1-210ENST00000529795 ADAMTS7Q9UKP4 1686 aa16.93■□□□□ 0.3
PACS1-210ENST00000529795 CNTNAP4Q9C0A0 1308 aa16.93■□□□□ 0.3
PACS1-210ENST00000529795 MRC1P22897 1456 aa16.93■□□□□ 0.3
PACS1-210ENST00000529795 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
PACS1-210ENST00000529795 HTATSF1O43719 755 aaKnown RBP16.91■□□□□ 0.3
PACS1-210ENST00000529795 PHF14O94880 888 aa16.91■□□□□ 0.3
PACS1-210ENST00000529795 VSIG10Q8N0Z9 540 aa16.91■□□□□ 0.3
PACS1-210ENST00000529795 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
PACS1-210ENST00000529795 RPS6KA4O75676 772 aa16.9■□□□□ 0.3
PACS1-210ENST00000529795 TEX13AQ9BXU3 409 aaPredicted RBP16.9■□□□□ 0.3
PACS1-210ENST00000529795 CICQ96RK0 1608 aaPredicted RBP16.89■□□□□ 0.29
PACS1-210ENST00000529795 SLC4A9Q96Q91 983 aa16.89■□□□□ 0.29
PACS1-210ENST00000529795 RFC4P35249 363 aa16.88■□□□□ 0.29
PACS1-210ENST00000529795 KLHL34Q8N239 644 aa16.88■□□□□ 0.29
PACS1-210ENST00000529795 NLGN1Q8N2Q7 840 aa16.88■□□□□ 0.29
PACS1-210ENST00000529795 PHACTR3Q96KR7 559 aa16.88■□□□□ 0.29
PACS1-210ENST00000529795 MYBBP1AQ9BQG0 1328 aaKnown RBP16.88■□□□□ 0.29
PACS1-210ENST00000529795 STARD3NLO95772 234 aa16.87■□□□□ 0.29
PACS1-210ENST00000529795 CRKLP46109 303 aaKnown RBP16.87■□□□□ 0.29
PACS1-210ENST00000529795 IL17REQ8NFR9 667 aa16.87■□□□□ 0.29
PACS1-210ENST00000529795 MYH14Q7Z406 1995 aaKnown RBP16.86■□□□□ 0.29
PACS1-210ENST00000529795 SLC39A6Q13433 755 aa16.86■□□□□ 0.29
PACS1-210ENST00000529795 MSL1Q68DK7 614 aa16.86■□□□□ 0.29
PACS1-210ENST00000529795 ZNF790Q6PG37 636 aa16.86■□□□□ 0.29
PACS1-210ENST00000529795 CD2APQ9Y5K6 639 aa16.86■□□□□ 0.29
PACS1-210ENST00000529795 MAPK8IP3Q9UPT6 1336 aa16.86■□□□□ 0.29
PACS1-210ENST00000529795 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
PACS1-210ENST00000529795 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
PACS1-210ENST00000529795 SIPA1L3O60292 1781 aaPredicted RBP16.84■□□□□ 0.29
PACS1-210ENST00000529795 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
PACS1-210ENST00000529795 FMNL2Q96PY5 1086 aa16.84■□□□□ 0.29
PACS1-210ENST00000529795 CCDC87Q9NVE4 849 aa16.84■□□□□ 0.29
PACS1-210ENST00000529795 TJP1Q07157 1748 aa16.84■□□□□ 0.29
PACS1-210ENST00000529795 UBR2Q8IWV8 1755 aa16.84■□□□□ 0.29
PACS1-210ENST00000529795 BTBD11A6QL63 1104 aa16.83■□□□□ 0.28
PACS1-210ENST00000529795 DNAJC10Q8IXB1 793 aa16.83■□□□□ 0.28
PACS1-210ENST00000529795 ZPR1O75312 459 aa16.82■□□□□ 0.28
PACS1-210ENST00000529795 CYP19A1P11511 503 aaPredicted RBP16.82■□□□□ 0.28
PACS1-210ENST00000529795 PNISRQ8TF01 805 aaKnown RBP16.82■□□□□ 0.28
PACS1-210ENST00000529795 KCPQ6ZWJ8 1503 aa16.81■□□□□ 0.28
PACS1-210ENST00000529795 WDR43Q15061 677 aaKnown RBP eCLIP16.81■□□□□ 0.28
PACS1-210ENST00000529795 TAF7Q15545 349 aaPredicted RBP16.81■□□□□ 0.28
PACS1-210ENST00000529795 GPR162Q16538 588 aa16.81■□□□□ 0.28
PACS1-210ENST00000529795 AMIGO3Q86WK7 504 aa16.81■□□□□ 0.28
PACS1-210ENST00000529795 CHD4Q14839 1912 aa16.8■□□□□ 0.28
PACS1-210ENST00000529795 DLG5Q8TDM6 1919 aa16.8■□□□□ 0.28
PACS1-210ENST00000529795 HEG1Q9ULI3 1381 aa16.8■□□□□ 0.28
PACS1-210ENST00000529795 A0A087WZG4 1122 aa16.8■□□□□ 0.28
PACS1-210ENST00000529795 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
PACS1-210ENST00000529795 INTS5Q6P9B9 1019 aaKnown RBP16.8■□□□□ 0.28
PACS1-210ENST00000529795 GRIN3BO60391 1043 aa16.79■□□□□ 0.28
PACS1-210ENST00000529795 MMP10P09238 476 aa16.79■□□□□ 0.28
PACS1-210ENST00000529795 LMOD3Q0VAK6 560 aa16.79■□□□□ 0.28
PACS1-210ENST00000529795 MCM10Q7L590 875 aa16.79■□□□□ 0.28
PACS1-210ENST00000529795 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
PACS1-210ENST00000529795 PLEKHF1Q96S99 279 aa16.79■□□□□ 0.28
PACS1-210ENST00000529795 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms