RNA–Protein interactions for RNA: ENST00000529759.1

LDLRAD3-204, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-204ENST00000529759 PXDNLA1KZ92 1463 aa14.82□□□□□ -0.04
LDLRAD3-204ENST00000529759 MYH14Q7Z406 1995 aaKnown RBP14.82□□□□□ -0.04
LDLRAD3-204ENST00000529759 PHKG2P15735 406 aa14.81□□□□□ -0.04
LDLRAD3-204ENST00000529759 ATP6V1AP38606 617 aa14.81□□□□□ -0.04
LDLRAD3-204ENST00000529759 KIF13BQ9NQT8 1826 aa14.8□□□□□ -0.04
LDLRAD3-204ENST00000529759 DNAJC5GQ8N7S2 189 aa14.8□□□□□ -0.04
LDLRAD3-204ENST00000529759 TMOD3Q9NYL9 352 aa14.8□□□□□ -0.04
LDLRAD3-204ENST00000529759 POLKQ9UBT6 870 aa14.8□□□□□ -0.04
LDLRAD3-204ENST00000529759 WASHC2AQ641Q2 1341 aa14.79□□□□□ -0.04
LDLRAD3-204ENST00000529759 CICQ96RK0 1608 aaPredicted RBP14.78□□□□□ -0.04
LDLRAD3-204ENST00000529759 DPEP1P16444 411 aa14.78□□□□□ -0.04
LDLRAD3-204ENST00000529759 KCNA3P22001 575 aa14.78□□□□□ -0.04
LDLRAD3-204ENST00000529759 HTRA3P83110 453 aa14.78□□□□□ -0.04
LDLRAD3-204ENST00000529759 ARHGEF1Q92888 912 aaKnown RBP14.78□□□□□ -0.04
LDLRAD3-204ENST00000529759 NMRK2Q9NPI5 230 aa14.78□□□□□ -0.04
LDLRAD3-204ENST00000529759 SPG7Q9UQ90 795 aa14.78□□□□□ -0.04
LDLRAD3-204ENST00000529759 KDRP35968 1356 aa14.77□□□□□ -0.04
LDLRAD3-204ENST00000529759 TNNT2P45379 298 aaPredicted RBP14.77□□□□□ -0.05
LDLRAD3-204ENST00000529759 EIF4A2Q14240 407 aaKnown RBP14.77□□□□□ -0.05
LDLRAD3-204ENST00000529759 BCS1LQ9Y276 419 aa14.77□□□□□ -0.05
LDLRAD3-204ENST00000529759 BRCA1P38398 1863 aaKnown RBP14.76□□□□□ -0.05
LDLRAD3-204ENST00000529759 GYS1P13807 737 aa14.76□□□□□ -0.05
LDLRAD3-204ENST00000529759 IFNL2Q8IZJ0 200 aa14.76□□□□□ -0.05
LDLRAD3-204ENST00000529759 ARHGAP27Q6ZUM4 889 aa14.75□□□□□ -0.05
LDLRAD3-204ENST00000529759 RBM42Q9BTD8 480 aaKnown RBP14.75□□□□□ -0.05
LDLRAD3-204ENST00000529759 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.75□□□□□ -0.05
LDLRAD3-204ENST00000529759 COL5A3P25940 1745 aaPredicted RBP14.75□□□□□ -0.05
LDLRAD3-204ENST00000529759 TRAPPC3LQ5T215 181 aa14.74□□□□□ -0.05
LDLRAD3-204ENST00000529759 SRP68Q9UHB9 627 aaKnown RBP14.74□□□□□ -0.05
LDLRAD3-204ENST00000529759 KDM6AO15550 1401 aaPredicted RBP14.74□□□□□ -0.05
LDLRAD3-204ENST00000529759 C10orf71Q711Q0 1435 aa14.74□□□□□ -0.05
LDLRAD3-204ENST00000529759 C4AP0C0L4 1744 aa14.73□□□□□ -0.05
LDLRAD3-204ENST00000529759 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
LDLRAD3-204ENST00000529759 FCHSD2O94868 740 aa14.72□□□□□ -0.05
LDLRAD3-204ENST00000529759 TGFB2P61812 414 aa14.72□□□□□ -0.05
LDLRAD3-204ENST00000529759 RTCBQ9Y3I0 505 aaKnown RBP14.72□□□□□ -0.05
LDLRAD3-204ENST00000529759 RPS6KA4O75676 772 aa14.71□□□□□ -0.05
LDLRAD3-204ENST00000529759 DDR1Q08345 913 aa14.71□□□□□ -0.05
LDLRAD3-204ENST00000529759 AEBP1Q8IUX7 1158 aa14.71□□□□□ -0.05
LDLRAD3-204ENST00000529759 PCNTO95613 3336 aa14.71□□□□□ -0.05
LDLRAD3-204ENST00000529759 PLEKHG2Q9H7P9 1386 aa14.71□□□□□ -0.06
LDLRAD3-204ENST00000529759 PTCD1O75127 700 aaKnown RBP14.7□□□□□ -0.06
LDLRAD3-204ENST00000529759 TOMM70O94826 608 aa14.7□□□□□ -0.06
LDLRAD3-204ENST00000529759 FKBP8Q14318 412 aa14.7□□□□□ -0.06
LDLRAD3-204ENST00000529759 RC3H1Q5TC82 1133 aaKnown RBP14.7□□□□□ -0.06
LDLRAD3-204ENST00000529759 C9orf131Q5VYM1 1079 aa14.7□□□□□ -0.06
LDLRAD3-204ENST00000529759 NLGN1Q8N2Q7 840 aa14.7□□□□□ -0.06
LDLRAD3-204ENST00000529759 SBF1O95248 1867 aa14.69□□□□□ -0.06
LDLRAD3-204ENST00000529759 ZNF831Q5JPB2 1677 aa14.69□□□□□ -0.06
LDLRAD3-204ENST00000529759 ERVV-2B6SEH9 535 aa14.69□□□□□ -0.06
LDLRAD3-204ENST00000529759 HMGB2P26583 209 aaKnown RBP14.69□□□□□ -0.06
LDLRAD3-204ENST00000529759 CHRNA5P30532 468 aa14.69□□□□□ -0.06
LDLRAD3-204ENST00000529759 APLP1P51693 650 aa14.69□□□□□ -0.06
LDLRAD3-204ENST00000529759 EIF4G2P78344 907 aaKnown RBP eCLIP14.69□□□□□ -0.06
LDLRAD3-204ENST00000529759 POLR3GLQ9BT43 218 aa14.69□□□□□ -0.06
LDLRAD3-204ENST00000529759 ARFGEF1Q9Y6D6 1849 aa14.69□□□□□ -0.06
LDLRAD3-204ENST00000529759 ADAMTS7Q9UKP4 1686 aa14.68□□□□□ -0.06
LDLRAD3-204ENST00000529759 PRELPP51888 382 aa14.68□□□□□ -0.06
LDLRAD3-204ENST00000529759 CNTNAP4Q9C0A0 1308 aa14.67□□□□□ -0.06
LDLRAD3-204ENST00000529759 KCPQ6ZWJ8 1503 aa14.67□□□□□ -0.06
LDLRAD3-204ENST00000529759 WDR90Q96KV7 1748 aa14.67□□□□□ -0.06
LDLRAD3-204ENST00000529759 RFC4P35249 363 aa14.67□□□□□ -0.06
LDLRAD3-204ENST00000529759 CRKLP46109 303 aaKnown RBP14.67□□□□□ -0.06
LDLRAD3-204ENST00000529759 ZNF530Q6P9A1 599 aaPredicted RBP14.67□□□□□ -0.06
LDLRAD3-204ENST00000529759 NFATC2IPQ8NCF5 419 aa14.67□□□□□ -0.06
LDLRAD3-204ENST00000529759 CCDC87Q9NVE4 849 aa14.67□□□□□ -0.06
LDLRAD3-204ENST00000529759 PARP3Q9Y6F1 533 aa14.67□□□□□ -0.06
LDLRAD3-204ENST00000529759 TJP1Q07157 1748 aa14.66□□□□□ -0.06
LDLRAD3-204ENST00000529759 HSPA5P11021 654 aaKnown RBP14.66□□□□□ -0.06
LDLRAD3-204ENST00000529759 CABP4P57796 275 aa14.66□□□□□ -0.06
LDLRAD3-204ENST00000529759 COL13A1Q5TAT6 717 aaPredicted RBP14.66□□□□□ -0.06
LDLRAD3-204ENST00000529759 INTS5Q6P9B9 1019 aaKnown RBP14.66□□□□□ -0.06
LDLRAD3-204ENST00000529759 DCAF5Q96JK2 942 aa14.66□□□□□ -0.06
LDLRAD3-204ENST00000529759 RRAGCQ9HB90 399 aa14.65□□□□□ -0.06
LDLRAD3-204ENST00000529759 ADRA2BP18089 450 aa14.64□□□□□ -0.07
LDLRAD3-204ENST00000529759 TM4SF1P30408 202 aa14.64□□□□□ -0.07
LDLRAD3-204ENST00000529759 PIM2Q9P1W9 311 aa14.64□□□□□ -0.07
LDLRAD3-204ENST00000529759 USP42Q9H9J4 1324 aaKnown RBP14.64□□□□□ -0.07
LDLRAD3-204ENST00000529759 POLRMTO00411 1230 aaKnown RBP14.63□□□□□ -0.07
LDLRAD3-204ENST00000529759 MTHFSP49914 203 aa14.63□□□□□ -0.07
LDLRAD3-204ENST00000529759 RASSF7Q02833 373 aa14.63□□□□□ -0.07
LDLRAD3-204ENST00000529759 PLEKHO1Q53GL0 409 aaPredicted RBP14.63□□□□□ -0.07
LDLRAD3-204ENST00000529759 RBM46Q8TBY0 533 aaKnown RBP14.63□□□□□ -0.07
LDLRAD3-204ENST00000529759 PANK3Q9H999 370 aa14.63□□□□□ -0.07
LDLRAD3-204ENST00000529759 LGR6Q9HBX8 967 aa14.63□□□□□ -0.07
LDLRAD3-204ENST00000529759 RNF181Q9P0P0 153 aa14.63□□□□□ -0.07
LDLRAD3-204ENST00000529759 AFDNP55196 1824 aaKnown RBP14.62□□□□□ -0.07
LDLRAD3-204ENST00000529759 VIRMAQ69YN4 1812 aaKnown RBP14.62□□□□□ -0.07
LDLRAD3-204ENST00000529759 DNAJC10Q8IXB1 793 aa14.62□□□□□ -0.07
LDLRAD3-204ENST00000529759 CCER1Q8TC90 406 aaPredicted RBP14.62□□□□□ -0.07
LDLRAD3-204ENST00000529759 CCDC88AQ3V6T2 1871 aa14.61□□□□□ -0.07
LDLRAD3-204ENST00000529759 SCN11AQ9UI33 1791 aa14.61□□□□□ -0.07
LDLRAD3-204ENST00000529759 SLC39A6Q13433 755 aa14.61□□□□□ -0.07
LDLRAD3-204ENST00000529759 DALRD3Q5D0E6 543 aaKnown RBP14.61□□□□□ -0.07
LDLRAD3-204ENST00000529759 KLRG1Q96E93 195 aa14.61□□□□□ -0.07
LDLRAD3-204ENST00000529759 BCL2L12Q9HB09 334 aa14.61□□□□□ -0.07
LDLRAD3-204ENST00000529759 USPL1Q5W0Q7 1092 aa14.6□□□□□ -0.07
LDLRAD3-204ENST00000529759 SULT6B1Q6IMI4 303 aa14.6□□□□□ -0.07
LDLRAD3-204ENST00000529759 JMYQ8N9B5 988 aa14.6□□□□□ -0.07
LDLRAD3-204ENST00000529759 HSP90AB1P08238 724 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms