RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SENP3-EIF4A1A0A087X0R7 540 aa9.06□□□□□ -0.96
C11orf88-204ENST00000529661 SLC35F4A4IF30 521 aa9.06□□□□□ -0.96
C11orf88-204ENST00000529661 TMEM214Q6NUQ4 689 aaKnown RBP9.06□□□□□ -0.96
C11orf88-204ENST00000529661 FHDC1Q9C0D6 1143 aaPredicted RBP9.06□□□□□ -0.96
C11orf88-204ENST00000529661 MKRN1Q9UHC7 482 aaKnown RBP9.06□□□□□ -0.96
C11orf88-204ENST00000529661 GNASQ5JWF2 1037 aa9.05□□□□□ -0.96
C11orf88-204ENST00000529661 NBPF10Q6P3W6 841 aaKnown RBP9.05□□□□□ -0.96
C11orf88-204ENST00000529661 TAS1R3Q7RTX0 852 aa9.05□□□□□ -0.96
C11orf88-204ENST00000529661 NBPF15Q8N660 670 aa9.05□□□□□ -0.96
C11orf88-204ENST00000529661 TMEM229AB2RXF0 380 aa9.04□□□□□ -0.96
C11orf88-204ENST00000529661 WASLO00401 505 aaPredicted RBP9.04□□□□□ -0.96
C11orf88-204ENST00000529661 LMOD1P29536 600 aaPredicted RBP9.04□□□□□ -0.96
C11orf88-204ENST00000529661 PHKA2P46019 1235 aa9.04□□□□□ -0.96
C11orf88-204ENST00000529661 ATP1A2P50993 1020 aa9.04□□□□□ -0.96
C11orf88-204ENST00000529661 CLDN10P78369 228 aa9.04□□□□□ -0.96
C11orf88-204ENST00000529661 INSM1Q01101 510 aaPredicted RBP9.04□□□□□ -0.96
C11orf88-204ENST00000529661 OGFOD1Q8N543 542 aa9.04□□□□□ -0.96
C11orf88-204ENST00000529661 KIAA1024Q9UPX6 916 aa9.04□□□□□ -0.96
C11orf88-204ENST00000529661 CDC14CA4D256 554 aa9.03□□□□□ -0.96
C11orf88-204ENST00000529661 SPATA31C2B4DYI2 1134 aa9.03□□□□□ -0.96
C11orf88-204ENST00000529661 ITGA6P23229 1130 aa9.03□□□□□ -0.96
C11orf88-204ENST00000529661 LORP23490 312 aaPredicted RBP9.03□□□□□ -0.96
C11orf88-204ENST00000529661 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
C11orf88-204ENST00000529661 TPCN2Q8NHX9 752 aa9.03□□□□□ -0.96
C11orf88-204ENST00000529661 ZNF594Q96JF6 807 aaPredicted RBP9.03□□□□□ -0.96
C11orf88-204ENST00000529661 TIMMDC1Q9NPL8 285 aa9.03□□□□□ -0.96
C11orf88-204ENST00000529661 DNAAF2Q9NVR5 837 aaKnown RBP9.03□□□□□ -0.96
C11orf88-204ENST00000529661 RASA1P20936 1047 aa9.02□□□□□ -0.97
C11orf88-204ENST00000529661 SMTNP53814 917 aa9.02□□□□□ -0.97
C11orf88-204ENST00000529661 CCDC102BQ68D86 513 aa9.02□□□□□ -0.97
C11orf88-204ENST00000529661 RIPOR1Q6ZS17 1223 aa9.02□□□□□ -0.97
C11orf88-204ENST00000529661 GAS2L1Q99501 681 aaPredicted RBP9.02□□□□□ -0.97
C11orf88-204ENST00000529661 ZNF358Q9NW07 568 aa9.02□□□□□ -0.97
C11orf88-204ENST00000529661 C4orf17Q53FE4 359 aa9.01□□□□□ -0.97
C11orf88-204ENST00000529661 PPARGC1BQ86YN6 1023 aaKnown RBP9.01□□□□□ -0.97
C11orf88-204ENST00000529661 DYRK1BQ9Y463 629 aa9.01□□□□□ -0.97
C11orf88-204ENST00000529661 A6NJY4 79 aa9□□□□□ -0.97
C11orf88-204ENST00000529661 ARID3CA6NKF2 412 aa9□□□□□ -0.97
C11orf88-204ENST00000529661 BACH1O14867 736 aa9□□□□□ -0.97
C11orf88-204ENST00000529661 WDR44Q5JSH3 913 aa9□□□□□ -0.97
C11orf88-204ENST00000529661 VWA5B2Q8N398 1253 aa9□□□□□ -0.97
C11orf88-204ENST00000529661 GPR161Q8N6U8 529 aaKnown RBP9□□□□□ -0.97
C11orf88-204ENST00000529661 RHBDD1Q8TEB9 315 aa9□□□□□ -0.97
C11orf88-204ENST00000529661 SLC4A9Q96Q91 983 aa9□□□□□ -0.97
C11orf88-204ENST00000529661 RBM19Q9Y4C8 960 aaKnown RBP9□□□□□ -0.97
C11orf88-204ENST00000529661 ZBTB7BO15156 539 aaPredicted RBP8.99□□□□□ -0.97
C11orf88-204ENST00000529661 RFX1P22670 979 aa8.99□□□□□ -0.97
C11orf88-204ENST00000529661 LARP1Q6PKG0 1096 aaKnown RBP8.99□□□□□ -0.97
C11orf88-204ENST00000529661 LARGE2Q8N3Y3 721 aa8.99□□□□□ -0.97
C11orf88-204ENST00000529661 GPAMQ9HCL2 828 aa8.99□□□□□ -0.97
C11orf88-204ENST00000529661 CUEDC1Q9NWM3 386 aaPredicted RBP8.99□□□□□ -0.97
C11orf88-204ENST00000529661 STK17AQ9UEE5 414 aa8.99□□□□□ -0.97
C11orf88-204ENST00000529661 PLA2G4AP47712 749 aa8.98□□□□□ -0.97
C11orf88-204ENST00000529661 KRT76Q01546 638 aa8.98□□□□□ -0.97
C11orf88-204ENST00000529661 CFAP70Q5T0N1 1121 aa8.98□□□□□ -0.97
C11orf88-204ENST00000529661 NANOS1Q8WY41 292 aaKnown RBP8.98□□□□□ -0.97
C11orf88-204ENST00000529661 NIFKQ9BYG3 293 aaKnown RBP8.98□□□□□ -0.97
C11orf88-204ENST00000529661 VRTNQ9H8Y1 702 aa8.98□□□□□ -0.97
C11orf88-204ENST00000529661 SFI1A8K8P3 1242 aa8.97□□□□□ -0.97
C11orf88-204ENST00000529661 SUPT5HO00267 1087 aaKnown RBP8.97□□□□□ -0.97
C11orf88-204ENST00000529661 KANK4Q5T7N3 995 aaPredicted RBP8.97□□□□□ -0.97
C11orf88-204ENST00000529661 SV2AQ7L0J3 742 aa8.97□□□□□ -0.97
C11orf88-204ENST00000529661 TNS4Q8IZW8 715 aa8.97□□□□□ -0.97
C11orf88-204ENST00000529661 ARXQ96QS3 562 aa8.97□□□□□ -0.97
C11orf88-204ENST00000529661 USP3Q9Y6I4 520 aa8.97□□□□□ -0.97
C11orf88-204ENST00000529661 A0A1B0GTH6 734 aa8.96□□□□□ -0.98
C11orf88-204ENST00000529661 CDK2AP1O14519 115 aa8.96□□□□□ -0.98
C11orf88-204ENST00000529661 F11P03951 625 aa8.96□□□□□ -0.98
C11orf88-204ENST00000529661 MTFR1Q15390 333 aa8.96□□□□□ -0.98
C11orf88-204ENST00000529661 CRTC2Q53ET0 693 aaPredicted RBP8.96□□□□□ -0.98
C11orf88-204ENST00000529661 CDCA8Q53HL2 280 aa8.96□□□□□ -0.98
C11orf88-204ENST00000529661 SIX5Q8N196 739 aa8.96□□□□□ -0.98
C11orf88-204ENST00000529661 CCDC97Q96F63 343 aaPredicted RBP8.96□□□□□ -0.98
C11orf88-204ENST00000529661 CABP1Q9NZU7 370 aa8.96□□□□□ -0.98
C11orf88-204ENST00000529661 TBCELQ5QJ74 424 aa8.95□□□□□ -0.98
C11orf88-204ENST00000529661 TRIM22Q8IYM9 498 aa8.95□□□□□ -0.98
C11orf88-204ENST00000529661 ZSCAN1Q8NBB4 408 aa8.95□□□□□ -0.98
C11orf88-204ENST00000529661 AIDAQ96BJ3 306 aa8.95□□□□□ -0.98
C11orf88-204ENST00000529661 SCHIP1Q9P0W5 487 aaPredicted RBP8.95□□□□□ -0.98
C11orf88-204ENST00000529661 IQSEC3Q9UPP2 1182 aaPredicted RBP8.95□□□□□ -0.98
C11orf88-204ENST00000529661 USP17L15C9J2P7 530 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 USP17L10C9JJH3 530 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 USP17L13C9JLJ4 530 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 USP17L12C9JPN9 530 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 USP17L11C9JVI0 530 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 USP17L21D6R901 530 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 USP17L18D6R9N7 530 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 USP17L22D6RA61 530 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 USP17L17D6RBQ6 530 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 USP17L19D6RCP7 530 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 USP17L20D6RJB6 530 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 MSX1P28360 303 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 USP17L24Q0WX57 530 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 PTK7Q13308 1070 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 DBN1Q16643 649 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 SLC9A9Q8IVB4 645 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 TSEN2Q8NCE0 465 aaKnown RBP8.94□□□□□ -0.98
C11orf88-204ENST00000529661 ZNF837Q96EG3 531 aaPredicted RBP8.94□□□□□ -0.98
C11orf88-204ENST00000529661 PARP3Q9Y6F1 533 aa8.94□□□□□ -0.98
C11orf88-204ENST00000529661 H7C1W4 665 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms