RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 C1orf141Q5JVX7 400 aa16.44■□□□□ 0.22
SORL1-208ENST00000529445 MSL1Q68DK7 614 aa16.44■□□□□ 0.22
SORL1-208ENST00000529445 ATG3Q9NT62 314 aa16.44■□□□□ 0.22
SORL1-208ENST00000529445 COL5A3P25940 1745 aaPredicted RBP16.44■□□□□ 0.22
SORL1-208ENST00000529445 SCN11AQ9UI33 1791 aa16.43■□□□□ 0.22
SORL1-208ENST00000529445 IL13P35225 146 aa16.43■□□□□ 0.22
SORL1-208ENST00000529445 SULT6B1Q6IMI4 303 aa16.43■□□□□ 0.22
SORL1-208ENST00000529445 LINC00116Q8NCU8 138 aa16.43■□□□□ 0.22
SORL1-208ENST00000529445 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
SORL1-208ENST00000529445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.42■□□□□ 0.22
SORL1-208ENST00000529445 PHF14O94880 888 aa16.42■□□□□ 0.22
SORL1-208ENST00000529445 SSFA2P28290 1259 aa16.42■□□□□ 0.22
SORL1-208ENST00000529445 ATP6V1AP38606 617 aa16.42■□□□□ 0.22
SORL1-208ENST00000529445 NPC1L1Q9UHC9 1359 aa16.41■□□□□ 0.22
SORL1-208ENST00000529445 PER1O15534 1290 aaPredicted RBP16.41■□□□□ 0.22
SORL1-208ENST00000529445 MTHFSP49914 203 aa16.41■□□□□ 0.22
SORL1-208ENST00000529445 ITPK1Q13572 414 aa16.41■□□□□ 0.22
SORL1-208ENST00000529445 GPR162Q16538 588 aa16.41■□□□□ 0.22
SORL1-208ENST00000529445 GNPATO15228 680 aa16.4■□□□□ 0.22
SORL1-208ENST00000529445 CABP4P57796 275 aa16.4■□□□□ 0.22
SORL1-208ENST00000529445 CC2D1BQ5T0F9 858 aaKnown RBP16.4■□□□□ 0.22
SORL1-208ENST00000529445 AMIGO3Q86WK7 504 aa16.4■□□□□ 0.22
SORL1-208ENST00000529445 NLGN2Q8NFZ4 835 aa16.4■□□□□ 0.22
SORL1-208ENST00000529445 CICQ96RK0 1608 aaPredicted RBP16.39■□□□□ 0.21
SORL1-208ENST00000529445 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
SORL1-208ENST00000529445 RBM42Q9BTD8 480 aaKnown RBP16.38■□□□□ 0.21
SORL1-208ENST00000529445 CD2APQ9Y5K6 639 aa16.37■□□□□ 0.21
SORL1-208ENST00000529445 COL3A1P02461 1466 aaPredicted RBP16.36■□□□□ 0.21
SORL1-208ENST00000529445 MRC1P22897 1456 aa16.36■□□□□ 0.21
SORL1-208ENST00000529445 DIAPH1O60610 1272 aaKnown RBP16.36■□□□□ 0.21
SORL1-208ENST00000529445 AKAP4Q5JQC9 854 aa16.36■□□□□ 0.21
SORL1-208ENST00000529445 CNTNAP4Q9C0A0 1308 aa16.36■□□□□ 0.21
SORL1-208ENST00000529445 C4AP0C0L4 1744 aa16.36■□□□□ 0.21
SORL1-208ENST00000529445 TJP1Q07157 1748 aa16.36■□□□□ 0.21
SORL1-208ENST00000529445 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
SORL1-208ENST00000529445 ADAMTS7Q9UKP4 1686 aa16.35■□□□□ 0.21
SORL1-208ENST00000529445 SMIM5Q71RC9 77 aa16.35■□□□□ 0.21
SORL1-208ENST00000529445 SLC4A9Q96Q91 983 aa16.35■□□□□ 0.21
SORL1-208ENST00000529445 RTCBQ9Y3I0 505 aaKnown RBP16.35■□□□□ 0.21
SORL1-208ENST00000529445 HMOX1P09601 288 aa16.34■□□□□ 0.21
SORL1-208ENST00000529445 RC3H1Q5TC82 1133 aaKnown RBP16.34■□□□□ 0.21
SORL1-208ENST00000529445 NFATC2IPQ8NCF5 419 aa16.34■□□□□ 0.21
SORL1-208ENST00000529445 GRIN3BO60391 1043 aa16.33■□□□□ 0.2
SORL1-208ENST00000529445 ZNF784Q8NCA9 323 aaPredicted RBP16.33■□□□□ 0.2
SORL1-208ENST00000529445 PTCD1O75127 700 aaKnown RBP16.32■□□□□ 0.2
SORL1-208ENST00000529445 TRAPPC3LQ5T215 181 aa16.32■□□□□ 0.2
SORL1-208ENST00000529445 KIF13BQ9NQT8 1826 aa16.32■□□□□ 0.2
SORL1-208ENST00000529445 YBX3P16989 372 aaKnown RBP eCLIP16.31■□□□□ 0.28e-6■□□□□ 9.6
SORL1-208ENST00000529445 CNGB1Q14028 1251 aaPredicted RBP16.31■□□□□ 0.2
SORL1-208ENST00000529445 SLC52A2Q9HAB3 445 aa16.31■□□□□ 0.2
SORL1-208ENST00000529445 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
SORL1-208ENST00000529445 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
SORL1-208ENST00000529445 UBR2Q8IWV8 1755 aa16.29■□□□□ 0.2
SORL1-208ENST00000529445 MMP10P09238 476 aa16.29■□□□□ 0.2
SORL1-208ENST00000529445 RFC4P35249 363 aa16.29■□□□□ 0.2
SORL1-208ENST00000529445 MTHFSDQ2M296 383 aaKnown RBP16.29■□□□□ 0.2
SORL1-208ENST00000529445 U2SURPO15042 1029 aaKnown RBP16.28■□□□□ 0.2
SORL1-208ENST00000529445 RNMTO43148 476 aaKnown RBP16.28■□□□□ 0.2
SORL1-208ENST00000529445 CRKLP46109 303 aaKnown RBP16.28■□□□□ 0.2
SORL1-208ENST00000529445 NLGN1Q8N2Q7 840 aa16.28■□□□□ 0.2
SORL1-208ENST00000529445 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
SORL1-208ENST00000529445 KCPQ6ZWJ8 1503 aa16.28■□□□□ 0.2
SORL1-208ENST00000529445 CFAP53Q96M91 514 aa16.27■□□□□ 0.2
SORL1-208ENST00000529445 LGR6Q9HBX8 967 aa16.27■□□□□ 0.2
SORL1-208ENST00000529445 KIAA1551Q9HCM1 1747 aa16.27■□□□□ 0.19
SORL1-208ENST00000529445 SIPA1L3O60292 1781 aaPredicted RBP16.26■□□□□ 0.19
SORL1-208ENST00000529445 GAS2L2Q8NHY3 880 aa16.26■□□□□ 0.19
SORL1-208ENST00000529445 C10orf71Q711Q0 1435 aa16.26■□□□□ 0.19
SORL1-208ENST00000529445 GYS1P13807 737 aa16.25■□□□□ 0.19
SORL1-208ENST00000529445 N4BP2Q86UW6 1770 aaPredicted RBP16.25■□□□□ 0.19
SORL1-208ENST00000529445 PXDNLA1KZ92 1463 aa16.24■□□□□ 0.19
SORL1-208ENST00000529445 USP42Q9H9J4 1324 aaKnown RBP16.23■□□□□ 0.19
SORL1-208ENST00000529445 SLC39A6Q13433 755 aa16.23■□□□□ 0.19
SORL1-208ENST00000529445 DNAJC10Q8IXB1 793 aa16.23■□□□□ 0.19
SORL1-208ENST00000529445 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
SORL1-208ENST00000529445 PARP3Q9Y6F1 533 aa16.23■□□□□ 0.19
SORL1-208ENST00000529445 BRCA1P38398 1863 aaKnown RBP16.22■□□□□ 0.19
SORL1-208ENST00000529445 GNAT3A8MTJ3 354 aa16.22■□□□□ 0.19
SORL1-208ENST00000529445 INTS5Q6P9B9 1019 aaKnown RBP16.22■□□□□ 0.19
SORL1-208ENST00000529445 VSIG10Q8N0Z9 540 aa16.22■□□□□ 0.19
SORL1-208ENST00000529445 NUDCQ9Y266 331 aa16.22■□□□□ 0.19
SORL1-208ENST00000529445 CYP19A1P11511 503 aaPredicted RBP16.21■□□□□ 0.19
SORL1-208ENST00000529445 TGFB2P61812 414 aa16.21■□□□□ 0.19
SORL1-208ENST00000529445 TEFQ10587 303 aa16.21■□□□□ 0.19
SORL1-208ENST00000529445 TTC5Q8N0Z6 440 aa16.21■□□□□ 0.19
SORL1-208ENST00000529445 SOS1Q07889 1333 aaPredicted RBP16.2■□□□□ 0.18
SORL1-208ENST00000529445 PPP2R1AP30153 589 aa16.2■□□□□ 0.18
SORL1-208ENST00000529445 RSPH6AQ9H0K4 717 aa16.2■□□□□ 0.18
SORL1-208ENST00000529445 SRP68Q9UHB9 627 aaKnown RBP16.2■□□□□ 0.18
SORL1-208ENST00000529445 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
SORL1-208ENST00000529445 COL15A1P39059 1388 aa16.19■□□□□ 0.18
SORL1-208ENST00000529445 ZPR1O75312 459 aa16.19■□□□□ 0.18
SORL1-208ENST00000529445 PRKAR2BP31323 418 aa16.19■□□□□ 0.18
SORL1-208ENST00000529445 FKBP8Q14318 412 aa16.19■□□□□ 0.18
SORL1-208ENST00000529445 ATP10DQ9P241 1426 aa16.19■□□□□ 0.18
SORL1-208ENST00000529445 ADCY9O60503 1353 aa16.18■□□□□ 0.18
SORL1-208ENST00000529445 CEMIPQ8WUJ3 1361 aa16.18■□□□□ 0.18
SORL1-208ENST00000529445 ARFGEF1Q9Y6D6 1849 aa16.18■□□□□ 0.18
SORL1-208ENST00000529445 GIGYF1O75420 1035 aaPredicted RBP16.18■□□□□ 0.18
SORL1-208ENST00000529445 STARD3NLO95772 234 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms