RNA–Protein interactions for RNA: ENST00000529273.1

ROM1-204, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 4

Gene ROM1, Length 249 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-204ENST00000529273 ITPK1Q13572 414 aa37.48■■■■□ 3.59
ROM1-204ENST00000529273 KLHL34Q8N239 644 aa37.48■■■■□ 3.59
ROM1-204ENST00000529273 COL24A1Q17RW2 1714 aa37.47■■■■□ 3.59
ROM1-204ENST00000529273 YY1P25490 414 aa37.47■■■■□ 3.59
ROM1-204ENST00000529273 CABP4P57796 275 aa37.47■■■■□ 3.59
ROM1-204ENST00000529273 MSL1Q68DK7 614 aa37.47■■■■□ 3.59
ROM1-204ENST00000529273 AMIGO3Q86WK7 504 aa37.47■■■■□ 3.59
ROM1-204ENST00000529273 DIAPH1O60610 1272 aaKnown RBP37.45■■■■□ 3.59
ROM1-204ENST00000529273 HMOX1P09601 288 aa37.44■■■■□ 3.58
ROM1-204ENST00000529273 SMIM5Q71RC9 77 aa37.44■■■■□ 3.58
ROM1-204ENST00000529273 PHF14O94880 888 aa37.43■■■■□ 3.58
ROM1-204ENST00000529273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP37.42■■■■□ 3.58
ROM1-204ENST00000529273 RBM42Q9BTD8 480 aaKnown RBP37.41■■■■□ 3.58
ROM1-204ENST00000529273 SSFA2P28290 1259 aa37.39■■■■□ 3.58
ROM1-204ENST00000529273 SLC4A9Q96Q91 983 aa37.39■■■■□ 3.58
ROM1-204ENST00000529273 NFATC2IPQ8NCF5 419 aa37.38■■■■□ 3.57
ROM1-204ENST00000529273 GNPATO15228 680 aa37.37■■■■□ 3.57
ROM1-204ENST00000529273 AKAP4Q5JQC9 854 aa37.37■■■■□ 3.57
ROM1-204ENST00000529273 NLGN2Q8NFZ4 835 aa37.34■■■■□ 3.57
ROM1-204ENST00000529273 UBR3Q6ZT12 1888 aa37.33■■■■□ 3.57
ROM1-204ENST00000529273 GPR162Q16538 588 aa37.31■■■■□ 3.56
ROM1-204ENST00000529273 COL3A1P02461 1466 aaPredicted RBP37.31■■■■□ 3.56
ROM1-204ENST00000529273 PTCD1O75127 700 aaKnown RBP37.3■■■■□ 3.56
ROM1-204ENST00000529273 MTHFSDQ2M296 383 aaKnown RBP37.3■■■■□ 3.56
ROM1-204ENST00000529273 LGR6Q9HBX8 967 aa37.3■■■■□ 3.56
ROM1-204ENST00000529273 U2SURPO15042 1029 aaKnown RBP37.29■■■■□ 3.56
ROM1-204ENST00000529273 RC3H1Q5TC82 1133 aaKnown RBP37.27■■■■□ 3.56
ROM1-204ENST00000529273 RTCBQ9Y3I0 505 aaKnown RBP37.27■■■■□ 3.56
ROM1-204ENST00000529273 RNMTO43148 476 aaKnown RBP37.26■■■■□ 3.56
ROM1-204ENST00000529273 SLC52A2Q9HAB3 445 aa37.26■■■■□ 3.56
ROM1-204ENST00000529273 PELP1Q8IZL8 1130 aaKnown RBP37.25■■■■□ 3.55
ROM1-204ENST00000529273 CNTNAP4Q9C0A0 1308 aa37.25■■■■□ 3.55
ROM1-204ENST00000529273 ZNF831Q5JPB2 1677 aa37.25■■■■□ 3.55
ROM1-204ENST00000529273 TRAPPC3LQ5T215 181 aa37.24■■■■□ 3.55
ROM1-204ENST00000529273 CD2APQ9Y5K6 639 aa37.24■■■■□ 3.55
ROM1-204ENST00000529273 CFAP53Q96M91 514 aa37.21■■■■□ 3.55
ROM1-204ENST00000529273 SCN11AQ9UI33 1791 aa37.21■■■■□ 3.55
ROM1-204ENST00000529273 RPS6KA4O75676 772 aa37.2■■■■□ 3.55
ROM1-204ENST00000529273 ADRA2BP18089 450 aa37.18■■■■□ 3.54
ROM1-204ENST00000529273 ARHGEF1Q92888 912 aaKnown RBP37.18■■■■□ 3.54
ROM1-204ENST00000529273 PPP2R1AP30153 589 aa37.17■■■■□ 3.54
ROM1-204ENST00000529273 CRKLP46109 303 aaKnown RBP37.16■■■■□ 3.54
ROM1-204ENST00000529273 MRC1P22897 1456 aa37.15■■■■□ 3.54
ROM1-204ENST00000529273 SLC39A6Q13433 755 aa37.15■■■■□ 3.54
ROM1-204ENST00000529273 COL5A3P25940 1745 aaPredicted RBP37.15■■■■□ 3.54
ROM1-204ENST00000529273 YBX3P16989 372 aaKnown RBP eCLIP37.13■■■■□ 3.53
ROM1-204ENST00000529273 RFC4P35249 363 aa37.13■■■■□ 3.53
ROM1-204ENST00000529273 GAS2L2Q8NHY3 880 aa37.13■■■■□ 3.53
ROM1-204ENST00000529273 MMP10P09238 476 aa37.12■■■■□ 3.53
ROM1-204ENST00000529273 NLGN1Q8N2Q7 840 aa37.12■■■■□ 3.53
ROM1-204ENST00000529273 NUDCQ9Y266 331 aa37.11■■■■□ 3.53
ROM1-204ENST00000529273 DNAJC10Q8IXB1 793 aa37.1■■■■□ 3.53
ROM1-204ENST00000529273 ADAMTS7Q9UKP4 1686 aa37.09■■■■□ 3.53
ROM1-204ENST00000529273 GNAT3A8MTJ3 354 aa37.08■■■■□ 3.53
ROM1-204ENST00000529273 GRIN3BO60391 1043 aa37.08■■■■□ 3.53
ROM1-204ENST00000529273 GYS1P13807 737 aa37.08■■■■□ 3.53
ROM1-204ENST00000529273 PRKAR2BP31323 418 aa37.08■■■■□ 3.53
ROM1-204ENST00000529273 INTS5Q6P9B9 1019 aaKnown RBP37.08■■■■□ 3.53
ROM1-204ENST00000529273 RSPH6AQ9H0K4 717 aa37.08■■■■□ 3.53
ROM1-204ENST00000529273 ZNF784Q8NCA9 323 aaPredicted RBP37.07■■■■□ 3.52
ROM1-204ENST00000529273 IL17REQ8NFR9 667 aa37.07■■■■□ 3.52
ROM1-204ENST00000529273 PHACTR3Q96KR7 559 aa37.07■■■■□ 3.52
ROM1-204ENST00000529273 UTRNP46939 3433 aa37.07■■■■□ 3.52
ROM1-204ENST00000529273 MYH14Q7Z406 1995 aaKnown RBP37.06■■■■□ 3.52
ROM1-204ENST00000529273 TJP1Q07157 1748 aa37.06■■■■□ 3.52
ROM1-204ENST00000529273 CICQ96RK0 1608 aaPredicted RBP37.04■■■■□ 3.52
ROM1-204ENST00000529273 U2AF1L5P0DN76 240 aaPredicted RBP37.04■■■■□ 3.52
ROM1-204ENST00000529273 U2AF1Q01081 240 aaKnown RBP eCLIP37.04■■■■□ 3.52
ROM1-204ENST00000529273 CCDC87Q9NVE4 849 aa37.04■■■■□ 3.52
ROM1-204ENST00000529273 KCPQ6ZWJ8 1503 aa37.02■■■■□ 3.52
ROM1-204ENST00000529273 CYP19A1P11511 503 aaPredicted RBP37.02■■■■□ 3.52
ROM1-204ENST00000529273 TEFQ10587 303 aa37.02■■■■□ 3.52
ROM1-204ENST00000529273 CHD4Q14839 1912 aa37.02■■■■□ 3.52
ROM1-204ENST00000529273 SRP68Q9UHB9 627 aaKnown RBP37.01■■■■□ 3.52
ROM1-204ENST00000529273 VSIG10Q8N0Z9 540 aa37■■■■□ 3.51
ROM1-204ENST00000529273 TTC5Q8N0Z6 440 aa36.99■■■■□ 3.51
ROM1-204ENST00000529273 FCHSD2O94868 740 aa36.98■■■■□ 3.51
ROM1-204ENST00000529273 USP42Q9H9J4 1324 aaKnown RBP36.98■■■■□ 3.51
ROM1-204ENST00000529273 VIRMAQ69YN4 1812 aaKnown RBP36.97■■■■□ 3.51
ROM1-204ENST00000529273 PARP3Q9Y6F1 533 aa36.97■■■■□ 3.51
ROM1-204ENST00000529273 SOS1Q07889 1333 aaPredicted RBP36.96■■■■□ 3.51
ROM1-204ENST00000529273 WWC3Q9ULE0 1092 aa36.96■■■■□ 3.51
ROM1-204ENST00000529273 FKBP8Q14318 412 aa36.95■■■■□ 3.51
ROM1-204ENST00000529273 C4AP0C0L4 1744 aa36.94■■■■□ 3.5
ROM1-204ENST00000529273 ZNF790Q6PG37 636 aa36.94■■■■□ 3.5
ROM1-204ENST00000529273 CEMIPQ8WUJ3 1361 aa36.93■■■■□ 3.5
ROM1-204ENST00000529273 ZNF496Q96IT1 587 aaPredicted RBP36.93■■■■□ 3.5
ROM1-204ENST00000529273 ZBTB1Q9Y2K1 713 aa36.93■■■■□ 3.5
ROM1-204ENST00000529273 GOLGB1Q14789 3259 aaKnown RBP36.92■■■■□ 3.5
ROM1-204ENST00000529273 ZPR1O75312 459 aa36.91■■■■□ 3.5
ROM1-204ENST00000529273 TGFB2P61812 414 aa36.9■■■■□ 3.5
ROM1-204ENST00000529273 C10orf71Q711Q0 1435 aa36.9■■■■□ 3.5
ROM1-204ENST00000529273 STARD3NLO95772 234 aa36.89■■■■□ 3.5
ROM1-204ENST00000529273 USPL1Q5W0Q7 1092 aa36.88■■■■□ 3.49
ROM1-204ENST00000529273 PXDNLA1KZ92 1463 aa36.88■■■■□ 3.49
ROM1-204ENST00000529273 UBR2Q8IWV8 1755 aa36.87■■■■□ 3.49
ROM1-204ENST00000529273 DDR1Q08345 913 aa36.87■■■■□ 3.49
ROM1-204ENST00000529273 RTF1Q92541 710 aaKnown RBP36.87■■■■□ 3.49
ROM1-204ENST00000529273 HEG1Q9ULI3 1381 aa36.87■■■■□ 3.49
ROM1-204ENST00000529273 A0A0G2JLW4 131 aa36.86■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms