RNA–Protein interactions for RNA: ENST00000529187.1

TMEM136-204, Transcript of transmembrane protein 136, humanhuman

TSL 1 (best) BASIC

Gene TMEM136, Length 3,930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM136-204ENST00000529187 AKAP4Q5JQC9 854 aa11.75□□□□□ -0.53
TMEM136-204ENST00000529187 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.75□□□□□ -0.53
TMEM136-204ENST00000529187 PELP1Q8IZL8 1130 aaKnown RBP11.75□□□□□ -0.53
TMEM136-204ENST00000529187 LY75O60449 1722 aa11.75□□□□□ -0.53
TMEM136-204ENST00000529187 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
TMEM136-204ENST00000529187 YY1P25490 414 aa11.75□□□□□ -0.53
TMEM136-204ENST00000529187 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
TMEM136-204ENST00000529187 GPR162Q16538 588 aa11.74□□□□□ -0.53
TMEM136-204ENST00000529187 SSFA2P28290 1259 aa11.73□□□□□ -0.53
TMEM136-204ENST00000529187 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
TMEM136-204ENST00000529187 ITGB4P16144 1822 aa11.73□□□□□ -0.53
TMEM136-204ENST00000529187 RTCBQ9Y3I0 505 aaKnown RBP11.73□□□□□ -0.53
TMEM136-204ENST00000529187 ITPK1Q13572 414 aa11.73□□□□□ -0.53
TMEM136-204ENST00000529187 TOGARAM1Q9Y4F4 1720 aa11.72□□□□□ -0.53
TMEM136-204ENST00000529187 KDM6AO15550 1401 aaPredicted RBP11.72□□□□□ -0.53
TMEM136-204ENST00000529187 GAS2L2Q8NHY3 880 aa11.71□□□□□ -0.53
TMEM136-204ENST00000529187 MTHFSDQ2M296 383 aaKnown RBP11.71□□□□□ -0.53
TMEM136-204ENST00000529187 TRAPPC3LQ5T215 181 aa11.71□□□□□ -0.53
TMEM136-204ENST00000529187 U2AF1L5P0DN76 240 aaPredicted RBP11.71□□□□□ -0.54
TMEM136-204ENST00000529187 U2AF1Q01081 240 aaKnown RBP eCLIP11.71□□□□□ -0.54
TMEM136-204ENST00000529187 NEFMP07197 916 aa11.7□□□□□ -0.54
TMEM136-204ENST00000529187 SMIM5Q71RC9 77 aa11.7□□□□□ -0.54
TMEM136-204ENST00000529187 MAP3K5Q99683 1374 aa11.7□□□□□ -0.54
TMEM136-204ENST00000529187 RNMTO43148 476 aaKnown RBP11.7□□□□□ -0.54
TMEM136-204ENST00000529187 TEFQ10587 303 aa11.7□□□□□ -0.54
TMEM136-204ENST00000529187 SLC52A2Q9HAB3 445 aa11.7□□□□□ -0.54
TMEM136-204ENST00000529187 C5P01031 1676 aa11.7□□□□□ -0.54
TMEM136-204ENST00000529187 LGR6Q9HBX8 967 aa11.7□□□□□ -0.54
TMEM136-204ENST00000529187 PPP2R1AP30153 589 aa11.69□□□□□ -0.54
TMEM136-204ENST00000529187 RFC4P35249 363 aa11.69□□□□□ -0.54
TMEM136-204ENST00000529187 TTC5Q8N0Z6 440 aa11.69□□□□□ -0.54
TMEM136-204ENST00000529187 C4BP0C0L5 1744 aa11.69□□□□□ -0.54
TMEM136-204ENST00000529187 RC3H1Q5TC82 1133 aaKnown RBP11.69□□□□□ -0.54
TMEM136-204ENST00000529187 QSER1Q2KHR3 1735 aa11.69□□□□□ -0.54
TMEM136-204ENST00000529187 ADRA2BP18089 450 aa11.68□□□□□ -0.54
TMEM136-204ENST00000529187 PRKAR2BP31323 418 aa11.68□□□□□ -0.54
TMEM136-204ENST00000529187 GNAT3A8MTJ3 354 aa11.68□□□□□ -0.54
TMEM136-204ENST00000529187 CNTNAP4Q9C0A0 1308 aa11.68□□□□□ -0.54
TMEM136-204ENST00000529187 RPS6KA4O75676 772 aa11.67□□□□□ -0.54
TMEM136-204ENST00000529187 SLC4A9Q96Q91 983 aa11.67□□□□□ -0.54
TMEM136-204ENST00000529187 SLC39A6Q13433 755 aa11.67□□□□□ -0.54
TMEM136-204ENST00000529187 AMIGO3Q86WK7 504 aa11.67□□□□□ -0.54
TMEM136-204ENST00000529187 NLGN1Q8N2Q7 840 aa11.67□□□□□ -0.54
TMEM136-204ENST00000529187 CD2APQ9Y5K6 639 aa11.67□□□□□ -0.54
TMEM136-204ENST00000529187 NLGN2Q8NFZ4 835 aa11.67□□□□□ -0.54
TMEM136-204ENST00000529187 RTF1Q92541 710 aaKnown RBP11.67□□□□□ -0.54
TMEM136-204ENST00000529187 CRKLP46109 303 aaKnown RBP11.67□□□□□ -0.54
TMEM136-204ENST00000529187 TAF1LQ8IZX4 1826 aa11.66□□□□□ -0.54
TMEM136-204ENST00000529187 TUBGCP6Q96RT7 1819 aa11.66□□□□□ -0.54
TMEM136-204ENST00000529187 MMP10P09238 476 aa11.66□□□□□ -0.54
TMEM136-204ENST00000529187 NPM2Q86SE8 214 aaKnown RBP11.66□□□□□ -0.54
TMEM136-204ENST00000529187 DNAJC10Q8IXB1 793 aa11.66□□□□□ -0.54
TMEM136-204ENST00000529187 ARHGEF1Q92888 912 aaKnown RBP11.66□□□□□ -0.54
TMEM136-204ENST00000529187 GRIN3BO60391 1043 aa11.65□□□□□ -0.54
TMEM136-204ENST00000529187 FCHSD2O94868 740 aa11.64□□□□□ -0.55
TMEM136-204ENST00000529187 CCDC87Q9NVE4 849 aa11.64□□□□□ -0.55
TMEM136-204ENST00000529187 COL3A1P02461 1466 aaPredicted RBP11.64□□□□□ -0.55
TMEM136-204ENST00000529187 ZPR1O75312 459 aa11.64□□□□□ -0.55
TMEM136-204ENST00000529187 RSPH6AQ9H0K4 717 aa11.64□□□□□ -0.55
TMEM136-204ENST00000529187 PARP3Q9Y6F1 533 aa11.64□□□□□ -0.55
TMEM136-204ENST00000529187 STARD3NLO95772 234 aa11.63□□□□□ -0.55
TMEM136-204ENST00000529187 DDX10Q13206 875 aaKnown RBP11.63□□□□□ -0.55
TMEM136-204ENST00000529187 PHACTR3Q96KR7 559 aa11.63□□□□□ -0.55
TMEM136-204ENST00000529187 WWC3Q9ULE0 1092 aa11.63□□□□□ -0.55
TMEM136-204ENST00000529187 UBR3Q6ZT12 1888 aa11.63□□□□□ -0.55
TMEM136-204ENST00000529187 IL17REQ8NFR9 667 aa11.62□□□□□ -0.55
TMEM136-204ENST00000529187 VSIG10Q8N0Z9 540 aa11.62□□□□□ -0.55
TMEM136-204ENST00000529187 PNNQ9H307 717 aaKnown RBP11.62□□□□□ -0.55
TMEM136-204ENST00000529187 ZNF330Q9Y3S2 320 aaPredicted RBP11.62□□□□□ -0.55
TMEM136-204ENST00000529187 SCN11AQ9UI33 1791 aa11.61□□□□□ -0.55
TMEM136-204ENST00000529187 GYS1P13807 737 aa11.61□□□□□ -0.55
TMEM136-204ENST00000529187 CANXP27824 592 aaKnown RBP11.61□□□□□ -0.55
TMEM136-204ENST00000529187 TEX13AQ9BXU3 409 aaPredicted RBP11.61□□□□□ -0.55
TMEM136-204ENST00000529187 BTBD11A6QL63 1104 aa11.61□□□□□ -0.55
TMEM136-204ENST00000529187 ZNF790Q6PG37 636 aa11.61□□□□□ -0.55
TMEM136-204ENST00000529187 FMNL2Q96PY5 1086 aa11.61□□□□□ -0.55
TMEM136-204ENST00000529187 SRP68Q9UHB9 627 aaKnown RBP11.61□□□□□ -0.55
TMEM136-204ENST00000529187 MAPK8IP3Q9UPT6 1336 aa11.61□□□□□ -0.55
TMEM136-204ENST00000529187 RALBP1Q15311 655 aa11.61□□□□□ -0.55
TMEM136-204ENST00000529187 CYP19A1P11511 503 aaPredicted RBP11.6□□□□□ -0.55
TMEM136-204ENST00000529187 INTS5Q6P9B9 1019 aaKnown RBP11.6□□□□□ -0.55
TMEM136-204ENST00000529187 ZNF496Q96IT1 587 aaPredicted RBP11.6□□□□□ -0.55
TMEM136-204ENST00000529187 ZBTB1Q9Y2K1 713 aa11.6□□□□□ -0.55
TMEM136-204ENST00000529187 USP42Q9H9J4 1324 aaKnown RBP11.59□□□□□ -0.55
TMEM136-204ENST00000529187 MRC1P22897 1456 aa11.59□□□□□ -0.55
TMEM136-204ENST00000529187 YBX3P16989 372 aaKnown RBP eCLIP11.59□□□□□ -0.55
TMEM136-204ENST00000529187 MCM10Q7L590 875 aa11.59□□□□□ -0.55
TMEM136-204ENST00000529187 FKBP8Q14318 412 aa11.58□□□□□ -0.56
TMEM136-204ENST00000529187 USPL1Q5W0Q7 1092 aa11.58□□□□□ -0.56
TMEM136-204ENST00000529187 SOS1Q07889 1333 aaPredicted RBP11.58□□□□□ -0.56
TMEM136-204ENST00000529187 A0A087WZG4 1122 aa11.58□□□□□ -0.56
TMEM136-204ENST00000529187 ZNF784Q8NCA9 323 aaPredicted RBP11.58□□□□□ -0.56
TMEM136-204ENST00000529187 COL24A1Q17RW2 1714 aa11.58□□□□□ -0.56
TMEM136-204ENST00000529187 HTATSF1O43719 755 aaKnown RBP11.58□□□□□ -0.56
TMEM136-204ENST00000529187 ZNF831Q5JPB2 1677 aa11.58□□□□□ -0.56
TMEM136-204ENST00000529187 TGFB2P61812 414 aa11.57□□□□□ -0.56
TMEM136-204ENST00000529187 HEG1Q9ULI3 1381 aa11.57□□□□□ -0.56
TMEM136-204ENST00000529187 NARFQ9UHQ1 456 aa11.57□□□□□ -0.56
TMEM136-204ENST00000529187 COL15A1P39059 1388 aa11.57□□□□□ -0.56
TMEM136-204ENST00000529187 MYH14Q7Z406 1995 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms